Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN05G1346 Fragaria x ananassa HOM05D002617 ORTHO05D006076 1.9e-231 805.4 400 100.0
FAN02G4200 Fragaria x ananassa HOM05D002617 ORTHO05D006076 3.5e-209 731.5 397 92.7
FAN14G4630 Fragaria x ananassa HOM05D002617 ORTHO05D006076 8.4e-187 657.1 381 89.0
FvH4_6g45480 Fragaria vesca HOM05D002617 ORTHO05D006076 8.7e-184 647.1 394 85.8
FAN09G0965 Fragaria x ananassa HOM05D002617 ORTHO05D006076 4.2e-170 601.7 342 90.1
RcHm_v2.0_Chr2g0163421 Rosa chinensis HOM05D002617 ORTHO05D006076 1.1e-159 567.0 398 76.4
Prupe.3G241000 Prunus persica HOM05D002617 ORTHO05D006076 1.3e-123 447.2 439 58.8
MD09G1082600 Malus domestica HOM05D002617 ORTHO05D006076 1.7e-107 393.7 421 55.1
MD17G1073100 Malus domestica HOM05D002617 ORTHO05D006076 6.8e-104 381.7 421 54.4
Cfa007960 Carpinus fangiana HOM05D002617 ORTHO05D009035 1.2e-97 360.9 401 53.4
QL02p053118 Quercus lobata HOM05D002617 ORTHO05D006076 6.8e-96 355.1 438 50.0
CANSAT64G0391 Cannabis sativa HOM05D002617 ORTHO05D006076 2.0e-95 353.6 431 49.0
Duzib177G0627 Durio zibethinus HOM05D002617 ORTHO05D006076 5.6e-90 335.5 395 50.1
CiPaw.03G005500 Carya illinoinensis HOM05D002617 ORTHO05D006076 7.3e-90 335.1 309 57.3
Dinv34860 Davidia involucrata HOM05D002617 ORTHO05D006076 2.1e-89 333.6 402 50.2
Glyma.13G047700 Glycine max HOM05D002617 ORTHO05D006076 2.8e-89 333.2 260 63.8
Eucgr.J01460 Eucalyptus grandis HOM05D002617 ORTHO05D006076 1.8e-88 330.5 400 49.8
Ca_26958_v3 Cicer arietinum L. HOM05D002617 ORTHO05D006076 1.3e-86 324.3 366 51.4
Duzib235G0774 Durio zibethinus HOM05D002617 ORTHO05D006076 1.3e-86 324.3 410 48.0
HanXRQChr14g0439661 Helianthus annuus HOM05D002617 ORTHO05D006076 2.2e-86 323.6 391 49.1
Atru.chr8.797 Acer truncatum HOM05D002617 ORTHO05D006076 2.9e-86 323.2 398 49.0
Lj2g0025982 Lotus japonicus HOM05D002617 ORTHO05D006076 2.9e-86 323.2 261 63.6
COL.COLO4_16207 Corchorus olitorius HOM05D002617 ORTHO05D006076 3.8e-86 322.8 410 49.0
VMungo0540G1549 Vigna mungo HOM05D002617 ORTHO05D006076 3.8e-86 322.8 260 61.5
GSVIVG01036455001 Vitis vinifera HOM05D002617 ORTHO05D009035 6.4e-86 322.0 408 49.3
arahy.Tifrunner.gnm1.ann1.LH188B Arachis hypogaea HOM05D002617 ORTHO05D006076 3.2e-85 319.7 261 61.7
Gohir.A13G161700 Gossypium hirsutum HOM05D002617 ORTHO05D006076 3.2e-85 319.7 405 48.1
Psat0s1160g0440 Pisum sativum HOM05D002617 ORTHO05D006076 1.6e-84 317.4 349 53.3
Lalb_Chr02g0158361 Lupinus albus HOM05D002617 ORTHO05D006076 2.1e-84 317.0 329 52.9
Medtr6g016990 Medicago truncatula HOM05D002617 ORTHO05D006076 2.7e-84 316.6 313 54.0
arahy.Tifrunner.gnm1.ann1.B4TVCG Arachis hypogaea HOM05D002617 ORTHO05D006076 4.6e-84 315.8 349 51.3
Cc07_g05010 Coffea canephora HOM05D002617 ORTHO05D006076 4.6e-84 315.8 394 48.2
Phvul.L003037 Phaseolus vulgaris HOM05D002617 ORTHO05D006076 6.0e-84 315.5 286 57.7
Haze_14109 Corylus avellana HOM05D002617 ORTHO05D006076 7.9e-84 315.1 547 41.0
TAR371G0417 Trochodendron aralioides HOM05D002617 ORTHO05D006076 7.9e-84 315.1 402 50.0
Cpa.g.sc179.38 Carica papaya HOM05D002617 ORTHO05D006076 1.3e-83 314.3 371 49.3
Lj4A130T19 Lonicera japonica HOM05D002617 ORTHO05D006076 1.7e-83 313.9 413 45.5
Sabra04G0077200 Salix brachista HOM05D002617 ORTHO05D006076 3.9e-83 312.8 260 60.0
Thecc.04G140400 Theobroma cacao HOM05D002617 ORTHO05D006076 3.9e-83 312.8 416 45.9
Lalb_Chr21g0317971 Lupinus albus HOM05D002617 ORTHO05D006076 5.1e-83 312.4 350 51.1
Manes.02G066000 Manihot esculenta HOM05D002617 ORTHO05D006076 6.6e-83 312.0 270 58.9
Gohir.D13G172300 Gossypium hirsutum HOM05D002617 ORTHO05D006076 1.1e-82 311.2 410 46.8
TPR.G9686 Trifolium pratense HOM05D002617 ORTHO05D006076 1.5e-82 310.8 386 48.4
Sc12g0007600 Simmondsia chinensis HOM05D002617 ORTHO05D006076 1.9e-82 310.5 387 49.1
Hma1.2p1_0550F.1_g177160 Hydrangea macrophylla HOM05D002617 ORTHO05D006076 2.5e-82 310.1 404 48.5
Ciclev10013582m.g Citrus clementina HOM05D002617 ORTHO05D009035 4.3e-82 309.3 394 47.7
Gorai.013G188400 Gossypium raimondii HOM05D002617 ORTHO05D006076 4.3e-82 309.3 410 46.6
MSTRG.23826 Avicennia marina HOM05D002617 ORTHO05D006076 5.6e-82 308.9 402 44.8
HanXRQChr15g0489371 Helianthus annuus HOM05D002617 ORTHO05D006076 7.4e-82 308.5 383 47.8
Hma1.2p1_0136F.1_g062020 Hydrangea macrophylla HOM05D002617 ORTHO05D006076 9.6e-82 308.1 260 61.9
PGR042G0381 Punica granatum HOM05D002617 ORTHO05D006076 9.6e-82 308.1 389 47.6
TWI74G0354 Tripterygium wilfordii HOM05D002617 ORTHO05D006076 9.6e-82 308.1 397 47.9
TAR629G1560 Trochodendron aralioides HOM05D002617 ORTHO05D006076 9.6e-82 308.1 393 50.1
Potri.004G104400 Populus trichocarpa HOM05D002617 ORTHO05D006076 2.1e-81 307.0 260 58.1
Carub.0002s1348 Capsella rubella HOM05D002617 ORTHO05D006076 4.8e-81 305.8 316 50.9
Sabra17G0092600 Salix brachista HOM05D002617 ORTHO05D006076 6.2e-81 305.4 260 59.2
Actinidia10244 Actinidia chinensis HOM05D002617 ORTHO05D006076 1.4e-80 304.3 402 46.3
AL2G25720 Arabidopsis lyrata HOM05D002617 ORTHO05D006076 4.0e-80 302.8 323 50.5
DCAR_026269 Daucus carota HOM05D002617 ORTHO05D006076 1.5e-79 300.8 397 46.9
Potri.017G111300 Populus trichocarpa HOM05D002617 ORTHO05D006076 1.5e-79 300.8 430 43.0
ClCG11G005280 Citrullus lanatus HOM05D002617 ORTHO05D006076 2.0e-79 300.4 463 43.6
Peaxi162Scf00479g00121 Petunia axillaris HOM05D002617 ORTHO05D006076 3.4e-79 299.7 392 47.4
Thhalv10027714m.g Eutrema salsugineum HOM05D002617 ORTHO05D006076 1.7e-78 297.4 386 45.6
Sopen03g009500 Solanum pennellii HOM05D002617 ORTHO05D000002 2.2e-78 297.0 401 44.9
Actinidia19593 Actinidia chinensis HOM05D002617 ORTHO05D006076 4.9e-78 295.8 262 58.4
Aa31LG2G3590 Aethionema arabicum HOM05D002617 ORTHO05D006076 4.9e-78 295.8 268 55.6
Solyc03g045060.3 Solanum lycopersicum HOM05D002617 ORTHO05D006076 4.9e-78 295.8 396 45.5
Nitab4.5_0003461g0050 Nicotiana tabacum HOM05D002617 ORTHO05D006076 8.4e-78 295.0 390 44.4
Oeu032874.2 Olea europaea HOM05D002617 ORTHO05D006076 8.4e-78 295.0 410 44.1
THA.LOC104805556 Tarenaya hassleriana HOM05D002617 ORTHO05D006076 8.4e-78 295.0 381 45.7
CsaV3_5G039050 Cucumis sativus L. HOM05D002617 ORTHO05D006076 1.9e-77 293.9 472 41.3
ECA232G1923 Erigeron canadensis HOM05D002617 ORTHO05D006076 2.4e-77 293.5 383 44.9
Sp5g22140 Schrenkiella parvula HOM05D002617 ORTHO05D006076 2.4e-77 293.5 320 50.6
CAN.G153.18 Capsicum annuum HOM05D002617 ORTHO05D006076 4.2e-77 292.7 325 49.2
Glyma.19G040800 Glycine max HOM05D002617 ORTHO05D006076 7.1e-77 292.0 260 57.7
Oeu043861.1 Olea europaea HOM05D002617 ORTHO05D006076 9.3e-77 291.6 399 44.4
AT1G67210 Arabidopsis thaliana HOM05D002617 ORTHO05D006076 1.2e-76 291.2 321 49.8
MELO3C022066.2 Cucumis melo HOM05D002617 ORTHO05D006076 1.2e-76 291.2 472 41.3
EL10Ac5g11460 Beta vulgaris HOM05D002617 ORTHO05D006076 1.6e-76 290.8 382 44.2
THA.LOC104822697 Tarenaya hassleriana HOM05D002617 ORTHO05D006076 7.9e-76 288.5 388 44.6
Lsat_1_v5_gn_4_175880 Lactuca sativa HOM05D002617 ORTHO05D006076 1.3e-75 287.7 258 57.8
Sp7g03340 Schrenkiella parvula HOM05D002617 ORTHO05D006076 1.1e-74 284.6 382 45.5
CARHR059670 Cardamine hirsuta HOM05D002617 ORTHO05D006076 3.3e-74 283.1 320 48.1
AL7G51930 Arabidopsis lyrata HOM05D002617 ORTHO05D006076 5.6e-74 282.3 339 49.0
Carub.0007s3725 Capsella rubella HOM05D002617 ORTHO05D006076 5.6e-74 282.3 388 45.1
BolC6t37041H Brassica oleracea HOM05D002617 ORTHO05D006076 7.4e-74 282.0 322 49.1
Sed0011770 Sechium edule HOM05D002617 ORTHO05D006076 1.3e-73 281.2 387 46.8
BcaC08g44397 Brassica carinata HOM05D002617 ORTHO05D006076 1.6e-73 280.8 359 46.5
Aqoxy3G00424 Aquilegia oxysepala HOM05D002617 ORTHO05D006076 6.2e-73 278.9 398 43.5
AT5G38600 Arabidopsis thaliana HOM05D002617 ORTHO05D006076 6.2e-73 278.9 383 43.9
BcaB02g08001 Brassica carinata HOM05D002617 ORTHO05D006076 8.1e-73 278.5 361 46.5
C06p18260 Brassica napus HOM05D000054 ORTHO05D006076 8.1e-73 278.5 367 45.8
PSO017G2525 Papaver somniferum HOM05D002617 ORTHO05D006076 8.1e-73 278.5 281 53.0
A07p19790 Brassica napus HOM05D002617 ORTHO05D006076 1.1e-72 278.1 284 51.1
BraA07t29680Z Brassica rapa HOM05D002617 ORTHO05D006076 1.1e-72 278.1 284 51.1
GSVIVG01011977001 Vitis vinifera HOM05D002617 ORTHO05D006076 1.8e-72 277.3 255 57.6
Migut.H00535 Erythranthe guttata HOM05D002617 ORTHO05D009035 3.1e-72 276.6 384 43.8
Rhsim07G0215800 Rhododendron simsii HOM05D002617 ORTHO05D006076 4.0e-72 276.2 413 44.1
Aa31LG9G16990 Aethionema arabicum HOM05D002617 ORTHO05D006076 1.2e-71 274.6 289 50.9
CARHR214050 Cardamine hirsuta HOM05D002617 ORTHO05D006076 2.6e-71 273.5 320 48.4
BcaB05g24247 Brassica carinata HOM05D002617 ORTHO05D006076 5.8e-71 272.3 315 48.3
PSO478G3319 Papaver somniferum HOM05D002617 ORTHO05D006076 1.3e-70 271.2 366 44.3
A02p14070 Brassica napus HOM05D002617 ORTHO05D006076 1.7e-70 270.8 319 47.6
Haze_14111 Corylus avellana HOM05D002617 ORTHO05D006076 1.7e-70 270.8 624 35.3
BraA02t06470Z Brassica rapa HOM05D002617 ORTHO05D006076 3.8e-70 269.6 319 47.6
C02p22680 Brassica napus HOM05D002617 ORTHO05D006076 4.9e-70 269.2 324 47.2
Nitab4.5_0004487g0050 Nicotiana tabacum HOM05D002617 ORTHO05D006076 4.9e-70 269.2 390 42.3
BcaC03g14816 Brassica carinata HOM05D002617 ORTHO05D006076 1.9e-69 267.3 324 46.9
BolC2t08421H Brassica oleracea HOM05D002617 ORTHO05D006076 1.9e-69 267.3 324 46.9
AUR62007748 Chenopodium quinoa HOM05D002617 ORTHO05D006076 5.5e-69 265.8 352 44.0
Actinidia29638 Actinidia chinensis HOM05D002617 ORTHO05D006076 6.0e-68 262.3 353 45.6
Thhalv10018682m.g Eutrema salsugineum HOM05D002617 ORTHO05D006076 6.0e-68 262.3 238 55.0
AUR62029876 Chenopodium quinoa HOM05D002617 ORTHO05D006076 3.9e-67 259.6 251 52.6
Ah.03g138020 Amaranthus hybridus HOM05D002617 ORTHO05D006076 8.7e-67 258.5 327 44.6
Actinidia13004 Actinidia chinensis HOM05D002617 ORTHO05D006076 1.5e-66 257.7 354 45.2
unitig_736.g22255 Utricularia gibba HOM05D002617 ORTHO05D006076 1.3e-65 254.6 307 45.6
AUR62025837 Chenopodium quinoa HOM05D002617 ORTHO05D006076 1.6e-65 254.2 258 50.8
ATR0598G067 Amborella trichopoda HOM05D002617 ORTHO05D006076 4.8e-65 252.7 391 40.7
EL10Ac6g14526 Beta vulgaris HOM05D002617 ORTHO05D006076 4.8e-65 252.7 267 50.9
DCAR_026709 Daucus carota HOM05D002617 ORTHO05D006076 1.0e-62 245.0 266 51.1
SGA_v2.0_scaffold204G41654 Striga asiatica HOM05D002617 ORTHO05D006076 1.0e-62 245.0 417 41.7
HPP92_011591 Vanilla planifolia HOM05D002617 ORTHO05D006076 1.3e-62 244.6 405 39.0
Sc11g0002970 Simmondsia chinensis HOM05D002617 ORTHO05D006076 3.2e-61 240.0 309 44.0
AUR62002941 Chenopodium quinoa HOM05D002617 ORTHO05D006076 7.2e-61 238.8 280 46.8
Os06g0495700 Oryza sativa ssp. japonica HOM05D002617 ORTHO05D006076 5.1e-59 232.6 324 44.1
Zm00001eb182330 Zea mays HOM05D002617 ORTHO05D006076 5.1e-59 232.6 276 46.4
Hund05776 Selenicereus undatus HOM05D002617 ORTHO05D006076 1.5e-58 231.1 355 39.2
Dinv33921 Davidia involucrata HOM05D002617 ORTHO05D009035 1.1e-56 224.9 164 69.5
vmacro04611 Vaccinium macrocarpon HOM05D002617 ORTHO05D006076 1.2e-44 184.9 407 36.1
Lsat_1_v5_gn_8_37540 Lactuca sativa HOM05D002617 ORTHO05D006076 1.0e-43 181.8 251 40.6
SMO005G0008 Selaginella moellendorffii HOM05D002617 ORTHO05D006076 1.1e-40 171.8 269 40.5
Mapoly0126s0021 Marchantia polymorpha HOM05D002617 ORTHO05D006076 5.3e-40 169.5 370 34.3
CDE03G0434 Ceratophyllum demersum HOM05D002617 ORTHO05D006076 3.5e-39 166.8 180 50.6
CSS0005448 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D006076 5.0e-38 162.9 137 59.9
Nn8g40574 Nelumbo nucifera HOM05D002617 ORTHO05D006076 1.2e-36 158.3 269 42.4
CSS0031641 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D006076 1.0e-35 155.2 137 58.4
SMO197G0066 Selaginella moellendorffii HOM05D002617 ORTHO05D006076 3.5e-31 140.2 269 35.7
Lj3A1022T61 Lonicera japonica HOM05D002617 ORTHO05D006076 2.1e-28 131.0 122 54.9
CBR_g21963 Chara braunii HOM05D002617 ORTHO05D006076 2.7e-28 130.6 393 28.8
AagrBONN_evm.TU.Sc2ySwM_344.4970 Anthoceros agrestis HOM05D002617 ORTHO05D006076 4.7e-28 129.8 216 35.6
Ah.02g115020 Amaranthus hybridus HOM05D002617 ORTHO05D006076 1.3e-25 121.7 115 52.2
Pp3c8_12390 Physcomitrium patens HOM05D002617 ORTHO05D006076 8.3e-25 119.0 202 37.1
CDE04G2372 Ceratophyllum demersum HOM05D002617 ORTHO05D006076 2.2e-22 110.9 227 36.1
CSS0013506 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D006076 2.8e-17 94.0 203 34.5
SalBow1G4795 Salvia bowleyana HOM05D002617 ORTHO05D006076 5.4e-16 89.7 216 31.5
SGA_v2.0_scaffold150G36614 Striga asiatica HOM05D002617 ORTHO05D006076 2.9e-14 84.0 273 29.7
CDE03G0290 Ceratophyllum demersum HOM05D002617 ORTHO05D006076 2.3e-06 57.8 81 43.2
Lsat_1_v5_gn_8_136421 Lactuca sativa HOM05D002617 ORTHO05D048373 2.3e-06 57.8 76 43.4
Actinidia19277 Actinidia chinensis HOM05D002617 ORTHO05D006076 5.0e-06 56.6 38 73.7


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