Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN05G1235 Fragaria x ananassa HOM05D011367 ORTHO05D001590 1.3e-90 336.3 159 100.0
FAN16G1555 Fragaria x ananassa HOM05D011367 ORTHO05D001590 3.2e-81 305.1 173 86.1
FAN16G3252 Fragaria x ananassa HOM05D011367 ORTHO05D001590 3.2e-81 305.1 173 86.1
FvH4_5g07921 Fragaria vesca HOM05D011367 ORTHO05D001590 1.8e-79 299.3 173 84.4
FAN06G5077 Fragaria x ananassa HOM05D011367 ORTHO05D001590 1.5e-78 296.2 173 83.2
FAN27G1165 Fragaria x ananassa HOM05D011367 ORTHO05D001590 2.8e-77 292.0 173 82.1
FAN18G1258 Fragaria x ananassa HOM05D011367 ORTHO05D001590 1.2e-67 260.0 199 69.3
FvH4_1g25221 Fragaria vesca HOM05D011367 ORTHO05D001590 3.1e-60 235.3 141 83.0
FAN18G2768 Fragaria x ananassa HOM05D011367 ORTHO05D001590 1.4e-55 219.9 173 66.5
FvH4_2g35252 Fragaria vesca HOM05D011367 ORTHO05D001590 2.6e-54 215.7 159 70.4
MD06G1101900 Malus domestica HOM05D001313 ORTHO05D001590 7.3e-25 117.9 173 36.4
Dinv02278 Davidia involucrata HOM05D007376 ORTHO05D006265 1.2e-22 110.5 171 35.1
RcHm_v2.0_Chr7g0195461 Rosa chinensis HOM05D001313 ORTHO05D001590 3.4e-22 109.0 176 33.5
FAN08G0328 Fragaria x ananassa HOM05D001313 ORTHO05D001590 4.4e-22 108.6 176 34.1
FvH4_5g04060 Fragaria vesca HOM05D001313 ORTHO05D001590 9.9e-22 107.5 176 34.1
FAN18G2114 Fragaria x ananassa HOM05D001313 ORTHO05D001590 9.9e-22 107.5 176 34.1
FAN18G3588 Fragaria x ananassa HOM05D001313 ORTHO05D001590 9.9e-22 107.5 176 34.1
MD06G1101600 Malus domestica HOM05D001313 ORTHO05D001590 4.9e-21 105.1 174 36.2
CSS0004408 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 4.6e-19 98.6 160 30.6
CSS0009315 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 4.6e-19 98.6 160 30.6
CSS0034277 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 6.0e-19 98.2 160 31.2
Prupe.5G115000 Prunus persica HOM05D001313 ORTHO05D001590 7.8e-19 97.8 173 31.2
CSS0018623 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 6.6e-18 94.7 103 38.8
CSS0022103 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 6.6e-18 94.7 164 32.3
CSS0027262 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 6.6e-18 94.7 160 30.0
MD10G1135600 Malus domestica HOM05D001313 ORTHO05D001590 5.6e-17 91.7 109 40.4
TWI77G0254 Tripterygium wilfordii HOM05D007376 ORTHO05D001590 7.3e-17 91.3 161 27.3
vmacro00666 Vaccinium macrocarpon HOM05D007376 ORTHO05D026098 9.6e-17 90.9 170 31.2
Rhsim05G0055800 Rhododendron simsii HOM05D007376 ORTHO05D001590 8.1e-16 87.8 160 33.1
CSS0003651 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.4e-15 87.0 171 27.5
vmacro23477 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 1.8e-15 86.7 145 32.4
Rhsim12G0049900 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.4e-15 86.3 125 35.2
TWI63G0295 Tripterygium wilfordii HOM05D007376 ORTHO05D001590 2.4e-15 86.3 168 29.2
CSS0020562 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 3.1e-15 85.9 103 36.9
Rhsim06G0146100 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.1e-15 85.9 124 35.5
Rhsim06G0208800 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.1e-15 85.9 160 32.5
Rhsim12G0081900 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.1e-15 85.9 107 34.6
CSS0037922 Camellia sinensis var. sinensis HOM05D001536 ORTHO05D001442 4.0e-15 85.5 143 32.2
RhsimUnG0042500 Rhododendron simsii HOM05D007376 ORTHO05D010137 4.0e-15 85.5 124 35.5
CSS0013522 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 5.3e-15 85.1 103 35.9
CSS0047844 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 5.3e-15 85.1 103 35.9
Rhsim01G0084000 Rhododendron simsii HOM05D007376 ORTHO05D001590 5.3e-15 85.1 159 31.4
Rhsim02G0073600 Rhododendron simsii HOM05D007376 ORTHO05D001590 6.9e-15 84.7 159 31.4
RhsimUnG0025400 Rhododendron simsii HOM05D007376 ORTHO05D001590 6.9e-15 84.7 111 36.0
Rhsim04G0033200 Rhododendron simsii HOM05D007376 ORTHO05D001590 9.0e-15 84.3 111 36.0
RhsimUnG0063200 Rhododendron simsii HOM05D007376 ORTHO05D001590 9.0e-15 84.3 159 31.4
RhsimUnG0211900 Rhododendron simsii HOM05D007376 ORTHO05D001590 9.0e-15 84.3 159 31.4
vmacro14386 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 9.0e-15 84.3 145 32.4
RhsimUnG0050500 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.6e-14 82.8 107 35.5
RhsimUnG0145500 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.6e-14 82.8 107 35.5
vmacro18964 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 9.9e-14 80.9 111 35.1
vmacro00903 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 1.3e-13 80.5 116 36.2
CSS0005751 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D001590 1.7e-13 80.1 125 30.4
CSS0008720 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.7e-13 80.1 125 30.4
CSS0026649 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.7e-13 80.1 125 30.4
FvH4_1g29720 Fragaria vesca HOM05D001313 ORTHO05D001590 2.2e-13 79.7 149 32.2
FvH4_2g01890 Fragaria vesca HOM05D001313 ORTHO05D001590 2.2e-13 79.7 177 27.7
CSS0013773 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 2.9e-13 79.3 125 30.4
CSS0015660 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 2.9e-13 79.3 125 30.4
FvH4_3g30870 Fragaria vesca HOM05D001313 ORTHO05D001590 2.9e-13 79.3 177 28.8
Rhsim02G0117900 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.8e-13 79.0 159 29.6
FvH4_2g09801 Fragaria vesca HOM05D012588 ORTHO05D001590 4.9e-13 78.6 175 32.0
FvH4_6g20370 Fragaria vesca HOM05D001313 ORTHO05D001590 4.9e-13 78.6 177 27.1
CSS0034250 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 6.4e-13 78.2 165 27.3
MD05G1071400 Malus domestica HOM05D001313 ORTHO05D001590 6.4e-13 78.2 176 29.5
FAN14G3515 Fragaria x ananassa HOM05D001313 ORTHO05D001590 8.4e-13 77.8 177 27.7
CSS0030880 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 1.1e-12 77.4 146 28.8
FvH4_2g10140 Fragaria vesca HOM05D012588 ORTHO05D001590 1.4e-12 77.0 175 32.6
Rhsim02G0220500 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.4e-12 77.0 136 32.4
Rhsim05G0036100 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.4e-12 77.0 136 32.4
FAN02G2220 Fragaria x ananassa HOM05D001313 ORTHO05D001590 2.4e-12 76.3 176 28.4
FAN19G0271 Fragaria x ananassa HOM05D001313 ORTHO05D001590 2.4e-12 76.3 155 27.7
RcHm_v2.0_Chr3g0457901 Rosa chinensis HOM05D028871 ORTHO05D001590 2.4e-12 76.3 170 27.1
CSS0022404 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 4.2e-12 75.5 103 34.0
RhsimUnG0230900 Rhododendron simsii HOM05D007376 ORTHO05D001590 4.2e-12 75.5 136 31.6
FvH4_4g08592 Fragaria vesca HOM05D001313 ORTHO05D001590 5.4e-12 75.1 115 29.6
FvH4_5g37401 Fragaria vesca HOM05D001313 ORTHO05D001590 5.4e-12 75.1 177 27.1
Rhsim12G0033500 Rhododendron simsii HOM05D007376 ORTHO05D001590 5.4e-12 75.1 139 30.9
CSS0024257 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 7.1e-12 74.7 125 30.4
FvH4_1g20524 Fragaria vesca HOM05D001313 ORTHO05D001590 7.1e-12 74.7 171 27.5
FvH4_1g24741 Fragaria vesca HOM05D001313 ORTHO05D001590 7.1e-12 74.7 115 29.6
FvH4_2g03221 Fragaria vesca HOM05D001313 ORTHO05D001590 7.1e-12 74.7 177 26.6
FvH4_3g31650 Fragaria vesca HOM05D001313 ORTHO05D001590 7.1e-12 74.7 115 29.6
FvH4_6g33380 Fragaria vesca HOM05D001313 ORTHO05D001590 7.1e-12 74.7 177 25.4
FAN12G2584 Fragaria x ananassa HOM05D001313 ORTHO05D001590 1.2e-11 73.9 100 33.0
Rhsim04G0174600 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.2e-11 73.9 156 30.8
FvH4_1g28820 Fragaria vesca HOM05D001313 ORTHO05D001590 1.6e-11 73.6 177 26.6
Rhsim03G0047500 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.6e-11 73.6 136 30.9
Rhsim04G0195400 Rhododendron simsii HOM05D007376 ORTHO05D007523 1.6e-11 73.6 160 26.2
Rhsim08G0213000 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.6e-11 73.6 163 28.8
FvH4_3g31130 Fragaria vesca HOM05D001313 ORTHO05D001590 2.1e-11 73.2 115 28.7
MD06G1101700 Malus domestica HOM05D001313 ORTHO05D001590 2.1e-11 73.2 142 33.1
Rhsim03G0108100 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.1e-11 73.2 164 26.2
FvH4_3g44640 Fragaria vesca HOM05D001313 ORTHO05D001590 2.7e-11 72.8 169 30.2
Rhsim12G0031000 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.7e-11 72.8 136 31.6
RhsimUnG0232600 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.7e-11 72.8 135 31.9
FvH4_4g09920 Fragaria vesca HOM05D001313 ORTHO05D001590 4.6e-11 72.0 159 28.9
FAN04G0718 Fragaria x ananassa HOM05D001313 ORTHO05D001590 4.6e-11 72.0 171 28.7
FAN06G4349 Fragaria x ananassa HOM05D001313 ORTHO05D001590 4.6e-11 72.0 122 30.3
Rhsim04G0158100 Rhododendron simsii HOM05D007376 ORTHO05D001590 6.0e-11 71.6 107 29.9
Rhsim08G0211500 Rhododendron simsii HOM05D000045 ORTHO05D000067 7.9e-11 71.2 164 27.4
CSS0003731 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.0e-10 70.9 134 31.3
CSS0006787 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.0e-10 70.9 134 31.3
CSS0007760 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.0e-10 70.9 134 31.3
CSS0012255 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.0e-10 70.9 134 31.3
CSS0013786 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.0e-10 70.9 134 31.3
CSS0029408 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.0e-10 70.9 134 31.3
CSS0037609 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.0e-10 70.9 134 31.3
FvH4_4g10272 Fragaria vesca HOM05D001313 ORTHO05D001590 1.0e-10 70.9 91 34.1
FAN15G3475 Fragaria x ananassa HOM05D001313 ORTHO05D001590 1.0e-10 70.9 115 28.7
CSS0035720 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 3.0e-10 69.3 134 30.6
FAN06G0107 Fragaria x ananassa HOM05D001313 ORTHO05D001590 3.9e-10 68.9 159 30.2
FAN09G0479 Fragaria x ananassa HOM05D001313 ORTHO05D001590 3.9e-10 68.9 159 30.2
FAN13G0579 Fragaria x ananassa HOM05D001313 ORTHO05D008319 3.9e-10 68.9 159 30.2
FAN16G1497 Fragaria x ananassa HOM05D001313 ORTHO05D001590 3.9e-10 68.9 159 30.2
FAN18G2179 Fragaria x ananassa HOM05D001313 ORTHO05D013602 3.9e-10 68.9 159 30.2
FAN19G2770 Fragaria x ananassa HOM05D001313 ORTHO05D001590 3.9e-10 68.9 115 29.6
FAN20G1515 Fragaria x ananassa HOM05D001313 ORTHO05D001590 3.9e-10 68.9 159 30.2
FAN28G1211 Fragaria x ananassa HOM05D001313 ORTHO05D001590 6.6e-10 68.2 174 23.6
vmacro15448 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 6.6e-10 68.2 161 25.5
FAN08G0758 Fragaria x ananassa HOM05D001313 ORTHO05D001590 8.7e-10 67.8 174 23.6
RcHm_v2.0_Chr5g0041501 Rosa chinensis HOM05D001313 ORTHO05D001590 8.7e-10 67.8 173 25.4
FAN14G1994 Fragaria x ananassa HOM05D001313 ORTHO05D001590 1.5e-09 67.0 92 32.6
FAN19G2053 Fragaria x ananassa HOM05D001313 ORTHO05D001590 1.9e-09 66.6 177 25.4
Rhsim05G0207800 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.5e-09 66.2 78 37.2
MD05G1170800 Malus domestica HOM05D023633 ORTHO05D001590 3.3e-09 65.9 168 23.8
PSO384G0458 Papaver somniferum HOM05D020661 ORTHO05D010137 3.3e-09 65.9 105 36.2
FAN18G1449 Fragaria x ananassa HOM05D001313 ORTHO05D001590 4.3e-09 65.5 166 30.7
FAN26G0448 Fragaria x ananassa HOM05D001313 ORTHO05D001590 5.6e-09 65.1 92 30.4
MD14G1121200 Malus domestica HOM05D001313 ORTHO05D001590 5.6e-09 65.1 141 31.2
vmacro01212 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 5.6e-09 65.1 92 30.4
CSS0022638 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 7.3e-09 64.7 132 31.1
FAN05G3768 Fragaria x ananassa HOM05D001313 ORTHO05D001590 9.6e-09 64.3 100 32.0
PSO210G2316 Papaver somniferum HOM05D008588 ORTHO05D010137 1.3e-08 63.9 105 26.7
PSO541G0958 Papaver somniferum HOM05D008588 ORTHO05D010137 1.3e-08 63.9 105 26.7
PSO675G7395 Papaver somniferum HOM05D008588 ORTHO05D010137 1.3e-08 63.9 105 26.7
Rhsim04G0163600 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.3e-08 63.9 131 26.7
Rhsim05G0021000 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.3e-08 63.9 160 28.8
FAN12G0223 Fragaria x ananassa HOM05D001313 ORTHO05D001590 1.6e-08 63.5 145 29.7
FAN22G0854 Fragaria x ananassa HOM05D001313 ORTHO05D001590 1.6e-08 63.5 140 22.9
PSO339G4851 Papaver somniferum HOM05D020661 ORTHO05D010137 2.1e-08 63.2 107 35.5
Rhsim05G0207500 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.1e-08 63.2 113 29.2
FAN28G2048 Fragaria x ananassa HOM05D001313 ORTHO05D001590 3.6e-08 62.4 101 27.7
FAN11G1661 Fragaria x ananassa HOM05D001313 ORTHO05D001590 8.1e-08 61.2 101 25.7
Rhsim01G0025600 Rhododendron simsii HOM05D007376 ORTHO05D001590 8.1e-08 61.2 76 31.6
FAN20G1692 Fragaria x ananassa HOM05D003258 ORTHO05D010103 1.1e-07 60.8 164 27.4
Rhsim12G0117400 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.8e-07 60.1 76 35.5
Lj5A81T87 Lonicera japonica HOM05D053520 ORTHO05D001590 2.4e-07 59.7 90 34.4
vmacro00568 Vaccinium macrocarpon HOM05D013156 ORTHO05D013099 4.0e-07 58.9 163 25.8
vmacro15977 Vaccinium macrocarpon HOM05D006123 ORTHO05D007578 6.9e-07 58.2 101 33.7
FAN19G1587 Fragaria x ananassa HOM05D001313 ORTHO05D001590 1.2e-06 57.4 97 26.8
FvH4_4g09880 Fragaria vesca HOM05D003258 ORTHO05D010103 1.5e-06 57.0 115 28.7
FvH4_4g15920 Fragaria vesca HOM05D001313 ORTHO05D001590 2.0e-06 56.6 82 28.0
FvH4_6g36750 Fragaria vesca HOM05D003258 ORTHO05D010103 2.6e-06 56.2 125 28.0
FvH4_6g34231 Fragaria vesca HOM05D003258 ORTHO05D010103 3.4e-06 55.8 116 29.3
Aqoxy2G02824 Aquilegia oxysepala HOM05D019735 ORTHO05D019678 4.5e-06 55.5 104 25.0
Dinv17528 Davidia involucrata HOM05D007376 ORTHO05D001590 4.5e-06 55.5 103 31.1
vmacro00448 Vaccinium macrocarpon HOM05D013156 ORTHO05D013099 4.5e-06 55.5 152 28.3
CSS0047144 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 5.8e-06 55.1 104 26.9
CSS0048369 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 5.8e-06 55.1 82 28.0
Rhsim07G0128100 Rhododendron simsii HOM05D007376 ORTHO05D001590 9.9e-06 54.3 104 30.8


User provided reference genes

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