Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN05G1092 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.9e-176 621.7 299 100.0
FAN14G5028 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.9e-176 621.7 299 100.0
FvH4_6g09911 Fragaria vesca HOM05D003981 ORTHO05D003666 4.3e-143 511.5 400 67.8
FvH4_5g07510 Fragaria vesca HOM05D003981 ORTHO05D003666 6.2e-33 145.6 366 31.4
FvH4_5g07350 Fragaria vesca HOM05D003981 ORTHO05D003666 5.2e-32 142.5 370 32.2
FvH4_5g07470 Fragaria vesca HOM05D003981 ORTHO05D003666 5.2e-32 142.5 366 31.1
FvH4_4g34580 Fragaria vesca HOM05D003981 ORTHO05D003666 2.7e-28 130.2 339 32.7
RcHm_v2.0_Chr3g0460411 Rosa chinensis HOM05D003981 ORTHO05D003666 7.8e-28 128.6 339 31.0
FAN07G1958 Fragaria x ananassa HOM05D003981 ORTHO05D003666 3.9e-27 126.3 383 30.8
FAN09G1093 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.9e-26 124.0 317 32.8
FAN18G1682 Fragaria x ananassa HOM05D003981 ORTHO05D003666 5.6e-26 122.5 376 31.6
FAN14G1975 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.6e-25 120.9 385 28.8
FAN14G0912 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.1e-25 120.6 197 39.6
FvH4_6g09801 Fragaria vesca HOM05D003981 ORTHO05D003666 4.7e-25 119.4 385 28.6
FvH4_1g25190 Fragaria vesca HOM05D003981 ORTHO05D003666 6.2e-25 119.0 362 29.6
FAN19G2785 Fragaria x ananassa HOM05D003981 ORTHO05D003666 8.1e-25 118.6 362 29.6
FAN09G1004 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.4e-24 117.9 348 29.9
MD12G1195500 Malus domestica HOM05D003981 ORTHO05D003666 2.3e-24 117.1 370 29.2
FvH4_5g08848 Fragaria vesca HOM05D003981 ORTHO05D003666 3.1e-24 116.7 394 27.9
FvH4_6g03511 Fragaria vesca HOM05D003981 ORTHO05D003666 3.1e-24 116.7 185 39.5
FAN12G3036 Fragaria x ananassa HOM05D003981 ORTHO05D003666 3.1e-24 116.7 382 28.8
FvH4_3g40671 Fragaria vesca HOM05D003981 ORTHO05D003666 6.8e-24 115.5 369 28.5
FvH4_4g34520 Fragaria vesca HOM05D003981 ORTHO05D003666 6.8e-24 115.5 382 28.5
FAN13G0559 Fragaria x ananassa HOM05D003981 ORTHO05D003666 6.8e-24 115.5 359 28.7
FAN28G1753 Fragaria x ananassa HOM05D003981 ORTHO05D003666 6.8e-24 115.5 384 28.9
FvH4_1g00691 Fragaria vesca HOM05D003981 ORTHO05D003666 8.9e-24 115.2 379 28.5
FAN08G1984 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.2e-23 114.8 357 30.3
FAN14G2468 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.5e-23 114.4 368 28.3
FAN16G2079 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.5e-23 114.4 369 28.5
FAN07G0986 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.0e-23 114.0 375 29.1
FAN26G0221 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.0e-23 114.0 226 35.4
FAN12G2446 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.6e-23 113.6 378 29.6
FAN14G5156 Fragaria x ananassa HOM05D003981 ORTHO05D003666 7.5e-23 112.1 128 50.0
MD12G1195600 Malus domestica HOM05D003981 ORTHO05D003666 9.9e-23 111.7 363 29.8
FAN17G1570 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.3e-22 111.3 393 28.0
FAN08G0171 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.2e-22 110.5 367 27.8
FvH4_3g13181 Fragaria vesca HOM05D003981 ORTHO05D003666 4.9e-22 109.4 167 40.7
MD04G1179800 Malus domestica HOM05D003981 ORTHO05D003666 4.9e-22 109.4 368 29.1
RcHm_v2.0_Chr3g0480281 Rosa chinensis HOM05D003981 ORTHO05D003666 8.3e-22 108.6 372 29.0
FvH4_6g14781 Fragaria vesca HOM05D003981 ORTHO05D003666 1.1e-21 108.2 197 36.0
FAN03G0829 Fragaria x ananassa HOM05D001225 ORTHO05D001252 1.9e-21 107.5 366 28.1
FAN06G2056 Fragaria x ananassa HOM05D001225 ORTHO05D001252 2.4e-21 107.1 352 29.8
FAN17G3075 Fragaria x ananassa HOM05D003981 ORTHO05D003666 3.2e-21 106.7 374 27.8
FAN04G2111 Fragaria x ananassa HOM05D003981 ORTHO05D003666 4.1e-21 106.3 364 28.0
FAN05G2982 Fragaria x ananassa HOM05D003981 ORTHO05D003666 5.4e-21 105.9 198 36.9
RcHm_v2.0_Chr6g0253541 Rosa chinensis HOM05D003981 ORTHO05D003666 9.2e-21 105.1 379 29.0
FvH4_4g22410 Fragaria vesca HOM05D003981 ORTHO05D003666 1.2e-20 104.8 305 29.8
FAN08G0629 Fragaria x ananassa HOM05D003981 ORTHO05D003666 3.5e-20 103.2 324 29.3
RcHm_v2.0_Chr4g0428611 Rosa chinensis HOM05D003981 ORTHO05D003666 4.6e-20 102.8 378 27.2
FvH4_5g38320 Fragaria vesca HOM05D003981 ORTHO05D003666 1.3e-19 101.3 350 27.7
FAN18G2397 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.7e-19 100.9 356 27.0
Prupe.7G182200 Prunus persica HOM05D003981 ORTHO05D003666 1.7e-19 100.9 376 30.1
FAN02G2482 Fragaria x ananassa HOM05D003981 ORTHO05D003666 5.1e-19 99.4 304 28.6
RcHm_v2.0_Chr2g0085201 Rosa chinensis HOM05D003981 ORTHO05D003666 6.6e-19 99.0 176 35.8
FAN15G2324 Fragaria x ananassa HOM05D002345 ORTHO05D002391 1.1e-18 98.2 294 29.9
Prupe.2G095800 Prunus persica HOM05D003981 ORTHO05D003666 1.1e-18 98.2 210 34.3
Prupe.7G195100 Prunus persica HOM05D003981 ORTHO05D003666 1.1e-18 98.2 306 30.1
FAN08G0706 Fragaria x ananassa HOM05D005518 ORTHO05D001269 1.5e-18 97.8 293 29.4
Prupe.2G209200 Prunus persica HOM05D003981 ORTHO05D003666 1.9e-18 97.4 186 33.9
FvH4_1g00812 Fragaria vesca HOM05D003981 ORTHO05D003666 2.5e-18 97.1 176 38.6
FvH4_3g01041 Fragaria vesca HOM05D003981 ORTHO05D003666 2.5e-18 97.1 261 31.0
FAN24G2659 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.5e-18 97.1 318 28.9
FAN27G2648 Fragaria x ananassa HOM05D003981 ORTHO05D003666 7.3e-18 95.5 286 29.0
FAN01G2610 Fragaria x ananassa HOM05D001225 ORTHO05D001252 9.5e-18 95.1 188 36.7
Prupe.7G195400 Prunus persica HOM05D003981 ORTHO05D003666 9.5e-18 95.1 368 28.0
FvH4_6g47480 Fragaria vesca HOM05D003981 ORTHO05D003666 2.8e-17 93.6 258 32.6
FAN14G1511 Fragaria x ananassa HOM05D003981 ORTHO05D003666 3.6e-17 93.2 259 32.4
MD11G1006900 Malus domestica HOM05D003981 ORTHO05D003666 3.6e-17 93.2 225 32.9
FvH4_2g04190 Fragaria vesca HOM05D003981 ORTHO05D003666 8.1e-17 92.0 169 34.9
FAN02G2079 Fragaria x ananassa HOM05D003981 ORTHO05D003666 8.1e-17 92.0 341 26.4
Prupe.8G061400 Prunus persica HOM05D003981 ORTHO05D003666 8.1e-17 92.0 289 25.6
RcHm_v2.0_Chr3g0449831 Rosa chinensis HOM05D003981 ORTHO05D003666 8.1e-17 92.0 207 32.9
FAN04G1299 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.1e-16 91.7 170 36.5
FvH4_6g47440 Fragaria vesca HOM05D003981 ORTHO05D003666 1.4e-16 91.3 341 26.1
FAN04G2735 Fragaria x ananassa HOM05D002662 ORTHO05D002957 1.4e-16 91.3 151 39.1
FAN10G2747 Fragaria x ananassa HOM05D001225 ORTHO05D001252 1.4e-16 91.3 194 35.1
MD12G1195000 Malus domestica HOM05D003981 ORTHO05D003666 1.8e-16 90.9 269 30.9
FAN18G0802 Fragaria x ananassa HOM05D002662 ORTHO05D003666 2.4e-16 90.5 135 43.7
RcHm_v2.0_Chr5g0016491 Rosa chinensis HOM05D003981 ORTHO05D003666 3.1e-16 90.1 157 38.9
FAN09G1373 Fragaria x ananassa HOM05D003981 ORTHO05D003666 5.2e-16 89.4 166 37.3
FAN25G1054 Fragaria x ananassa HOM05D005518 ORTHO05D001269 5.2e-16 89.4 151 38.4
FvH4_2g20921 Fragaria vesca HOM05D003981 ORTHO05D003666 8.9e-16 88.6 395 26.8
FAN05G1423 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.0e-15 87.4 127 41.7
FAN08G0901 Fragaria x ananassa HOM05D003981 ORTHO05D003666 7.6e-15 85.5 198 33.3
Prupe.3G238400 Prunus persica HOM05D003981 ORTHO05D003666 7.6e-15 85.5 299 24.1
Prupe.2G096000 Prunus persica HOM05D003981 ORTHO05D003666 9.9e-15 85.1 209 32.1
FAN09G0012 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.3e-14 84.7 262 29.0
Prupe.2G095900 Prunus persica HOM05D003981 ORTHO05D003666 1.7e-14 84.3 361 25.5
FAN18G2469 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.9e-14 83.6 186 35.5
FAN13G2076 Fragaria x ananassa HOM05D003981 ORTHO05D003666 8.4e-14 82.0 123 40.7
FAN11G1242 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.1e-13 81.6 326 24.8
FvH4_5g31171 Fragaria vesca HOM05D003981 ORTHO05D003666 1.9e-13 80.9 400 23.2
FvH4_5g06780 Fragaria vesca HOM05D003981 ORTHO05D003666 2.4e-13 80.5 198 32.3
FAN18G0593 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.4e-13 80.5 198 32.3
FAN23G0182 Fragaria x ananassa HOM05D003981 ORTHO05D003666 9.2e-13 78.6 144 37.5
FAN23G0731 Fragaria x ananassa HOM05D003981 ORTHO05D003666 9.2e-13 78.6 144 37.5
FAN23G1358 Fragaria x ananassa HOM05D003981 ORTHO05D003666 9.2e-13 78.6 144 37.5
FAN20G0367 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.6e-12 77.8 186 33.3
FAN18G0964 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.7e-12 77.0 173 31.2
HanXRQChr13g0419531 Helianthus annuus HOM05D000007 ORTHO05D003666 2.7e-12 77.0 157 31.2
FvH4_1g20161 Fragaria vesca HOM05D003981 ORTHO05D003666 6.0e-12 75.9 305 26.9
RcHm_v2.0_Chr2g0164001 Rosa chinensis HOM05D003981 ORTHO05D003666 1.3e-11 74.7 111 38.7
FAN25G0272 Fragaria x ananassa HOM05D009468 ORTHO05D012230 1.7e-11 74.3 47 80.9
FAN19G0280 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.3e-11 73.9 372 24.2
FAN19G2493 Fragaria x ananassa HOM05D003981 ORTHO05D003666 3.0e-11 73.6 125 36.0
FvH4_6g09550 Fragaria vesca HOM05D003981 ORTHO05D003666 3.3e-10 70.1 315 26.3
FAN08G0796 Fragaria x ananassa HOM05D003981 ORTHO05D003666 5.6e-10 69.3 149 32.9
TAR624G0631 Trochodendron aralioides HOM05D000007 ORTHO05D003666 5.6e-10 69.3 254 24.4
TWI59G0188 Tripterygium wilfordii HOM05D003981 ORTHO05D003666 1.6e-09 67.8 99 37.4
FAN13G2481 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.1e-09 67.4 343 25.1
Ciclev10030374m.g Citrus clementina HOM05D003981 ORTHO05D003666 2.8e-09 67.0 139 33.8
FAN04G1922 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.8e-09 67.0 198 30.3
FAN11G0099 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.8e-09 67.0 134 36.6
MD11G1005600 Malus domestica HOM05D003981 ORTHO05D003666 4.8e-09 66.2 192 30.2
FAN18G3444 Fragaria x ananassa HOM05D003981 ORTHO05D003666 8.1e-09 65.5 338 21.9
HanXRQChr13g0419581 Helianthus annuus HOM05D000007 ORTHO05D003666 1.1e-08 65.1 151 29.1
FAN02G1117 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.4e-08 64.7 66 51.5
FAN23G0843 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.4e-08 64.7 113 34.5
HanXRQChr13g0419571 Helianthus annuus HOM05D000007 ORTHO05D003666 1.4e-08 64.7 151 28.5
FAN28G2016 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.8e-08 64.3 85 44.7
Atru.chr5.2443 Acer truncatum HOM05D003981 ORTHO05D003666 3.1e-08 63.5 261 26.4
FvH4_6g45801 Fragaria vesca HOM05D003981 ORTHO05D003666 4.0e-08 63.2 101 37.6
FAN21G2722 Fragaria x ananassa HOM05D003981 ORTHO05D003666 5.3e-08 62.8 221 29.9
HanXRQChr13g0419481 Helianthus annuus HOM05D000007 ORTHO05D003666 5.3e-08 62.8 144 33.3
FAN02G3644 Fragaria x ananassa HOM05D003981 ORTHO05D003666 6.9e-08 62.4 210 30.0
FAN09G0546 Fragaria x ananassa HOM05D003981 ORTHO05D003666 6.9e-08 62.4 101 37.6
Lsat_1_v5_gn_2_52821 Lactuca sativa HOM05D003981 ORTHO05D003666 1.2e-07 61.6 142 28.2
FvH4_1g00551 Fragaria vesca HOM05D003981 ORTHO05D003666 2.6e-07 60.5 153 29.4
Atru.chr5.2441 Acer truncatum HOM05D003981 ORTHO05D003666 4.4e-07 59.7 112 32.1
Eucgr.J00721 Eucalyptus grandis HOM05D000007 ORTHO05D003666 4.4e-07 59.7 143 34.3
FvH4_1g00570 Fragaria vesca HOM05D003981 ORTHO05D003666 4.4e-07 59.7 281 24.9
Actinidia06940 Actinidia chinensis HOM05D003981 ORTHO05D003666 7.6e-07 58.9 109 34.9
Prupe.2G095600 Prunus persica HOM05D003981 ORTHO05D003666 1.3e-06 58.2 259 26.6
MD11G1006300 Malus domestica HOM05D003981 ORTHO05D003666 2.2e-06 57.4 70 45.7
Atru.chr9.1609 Acer truncatum HOM05D003981 ORTHO05D003666 2.9e-06 57.0 152 31.6
FAN14G0149 Fragaria x ananassa HOM05D003981 ORTHO05D003666 4.9e-06 56.2 69 43.5
FAN14G2642 Fragaria x ananassa HOM05D003981 ORTHO05D003666 4.9e-06 56.2 69 43.5
HanXRQChr13g0419561 Helianthus annuus HOM05D000007 ORTHO05D003666 6.4e-06 55.8 114 29.8
ECA240G0616 Erigeron canadensis HOM05D008254 ORTHO05D010423 8.4e-06 55.5 106 30.2
FAN26G3326 Fragaria x ananassa HOM05D003981 ORTHO05D003666 8.4e-06 55.5 110 38.2


User provided reference genes

Program Settings