Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN05G1034 Fragaria x ananassa HOM05D005959 ORTHO05D007263 5.9e-136 487.6 265 100.0
FAN09G4388 Fragaria x ananassa HOM05D005959 ORTHO05D007263 1.7e-135 486.1 265 99.2
FAN02G2849 Fragaria x ananassa HOM05D005959 ORTHO05D007263 1.4e-134 483.0 265 98.9
FAN14G3394 Fragaria x ananassa HOM05D005959 ORTHO05D007263 1.9e-134 482.6 265 98.5
RcHm_v2.0_Chr3g0468051 Rosa chinensis HOM05D005959 ORTHO05D007263 4.2e-134 481.5 265 98.1
FvH4_6g14820 Fragaria vesca HOM05D005959 ORTHO05D007263 1.2e-128 463.4 255 98.8
Prupe.6G245600 Prunus persica HOM05D005959 ORTHO05D007263 5.9e-128 461.1 265 92.1
MD12G1131100 Malus domestica HOM05D005959 ORTHO05D007263 4.2e-126 454.9 265 91.3
MD04G1110300 Malus domestica HOM05D005959 ORTHO05D007263 9.4e-126 453.8 265 90.2
Potri.016G082100 Populus trichocarpa HOM05D005959 ORTHO05D007263 4.4e-123 444.9 264 87.5
Cfa017467 Carpinus fangiana HOM05D005959 ORTHO05D007263 8.2e-122 440.7 265 87.5
QL07p045958 Quercus lobata HOM05D005959 ORTHO05D007263 1.4e-121 439.9 264 86.7
Rhsim05G0184400 Rhododendron simsii HOM05D005959 ORTHO05D007263 7.0e-121 437.6 265 87.2
Potri.006G215700 Populus trichocarpa HOM05D005959 ORTHO05D007263 1.5e-120 436.4 264 85.6
Haze_20691 Corylus avellana HOM05D005959 ORTHO05D007263 5.9e-120 434.5 278 84.2
Hma1.2p1_0111F.1_g053440 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 1.0e-119 433.7 265 84.9
Manes.08G000700 Manihot esculenta HOM05D005959 ORTHO05D007263 2.2e-119 432.6 265 84.2
Ciclev10012473m.g Citrus clementina HOM05D005959 ORTHO05D007263 1.1e-118 430.3 265 84.2
Gohir.D04G117100 Gossypium hirsutum HOM05D005959 ORTHO05D007263 1.9e-118 429.5 265 85.7
Glyma.10G047100 Glycine max HOM05D005959 ORTHO05D007263 2.5e-118 429.1 261 86.6
Gorai.009G422000 Gossypium raimondii HOM05D005959 ORTHO05D007263 3.2e-118 428.7 265 85.7
Peaxi162Scf00009g00079 Petunia axillaris HOM05D005959 ORTHO05D007263 4.2e-118 428.3 265 83.8
Thecc.05G049500 Theobroma cacao HOM05D005959 ORTHO05D007263 1.2e-117 426.8 265 83.8
MSTRG.26742 Avicennia marina HOM05D005959 ORTHO05D007263 2.1e-117 426.0 265 84.2
TAR623G1105 Trochodendron aralioides HOM05D005959 ORTHO05D007263 3.6e-117 425.2 265 84.9
PGR004G1166 Punica granatum HOM05D005959 ORTHO05D007263 6.1e-117 424.5 263 84.0
Duzib106G1538 Durio zibethinus HOM05D005959 ORTHO05D007263 8.0e-117 424.1 265 84.2
SGA_v2.0_scaffold94G28648 Striga asiatica HOM05D005959 ORTHO05D007263 8.0e-117 424.1 265 84.5
TWI74G1319 Tripterygium wilfordii HOM05D005959 ORTHO05D007263 8.0e-117 424.1 265 85.3
DCAR_020866 Daucus carota HOM05D005959 ORTHO05D007263 1.0e-116 423.7 265 83.4
PGSC0003DMG400017610 Solanum tuberosum HOM05D005959 ORTHO05D007263 1.4e-116 423.3 265 83.4
Solyc10g085950.2 Solanum lycopersicum HOM05D005959 ORTHO05D007263 1.8e-116 422.9 265 83.4
Eucgr.K03183 Eucalyptus grandis HOM05D005959 ORTHO05D007263 3.0e-116 422.2 261 84.7
Nitab4.5_0000725g0200 Nicotiana tabacum HOM05D005959 ORTHO05D007263 3.0e-116 422.2 265 82.6
Duzib093G0581 Durio zibethinus HOM05D005959 ORTHO05D007263 5.2e-116 421.4 265 83.4
Atru.chr8.2507 Acer truncatum HOM05D005959 ORTHO05D007263 6.7e-116 421.0 265 81.9
CANSAT80G1914 Cannabis sativa HOM05D005959 ORTHO05D007263 6.7e-116 421.0 261 84.7
Migut.L01643 Erythranthe guttata HOM05D005959 ORTHO05D007263 6.7e-116 421.0 265 82.3
Lsat_1_v5_gn_6_33160 Lactuca sativa HOM05D005959 ORTHO05D007263 1.1e-115 420.2 265 83.0
Cc06_g03270 Coffea canephora HOM05D005959 ORTHO05D007263 2.0e-115 419.5 265 82.3
Duzib128G1635 Durio zibethinus HOM05D005959 ORTHO05D007263 2.0e-115 419.5 265 82.6
ATR0594G178 Amborella trichopoda HOM05D005959 ORTHO05D007263 3.3e-115 418.7 265 84.5
Oeu026074.1 Olea europaea HOM05D005959 ORTHO05D007263 4.4e-115 418.3 265 81.5
Thhalv10017068m.g Eutrema salsugineum HOM05D005959 ORTHO05D007263 5.7e-115 417.9 262 82.1
Carub.0004s1924 Capsella rubella HOM05D005959 ORTHO05D007263 9.7e-115 417.2 264 82.2
Lj3A975G71 Lonicera japonica HOM05D005959 ORTHO05D007263 9.7e-115 417.2 265 82.3
HanXRQChr13g0399331 Helianthus annuus HOM05D005959 ORTHO05D007263 3.7e-114 415.2 265 82.3
AT2G37330 Arabidopsis thaliana HOM05D005959 ORTHO05D007263 8.2e-114 414.1 264 80.3
EL10Ac7g17275 Beta vulgaris HOM05D005959 ORTHO05D007263 1.1e-113 413.7 265 82.3
Ca_08807_v3 Cicer arietinum L. HOM05D005959 ORTHO05D007263 1.1e-113 413.7 263 82.9
arahy.Tifrunner.gnm1.ann1.R87Y2D Arachis hypogaea HOM05D005959 ORTHO05D007263 1.4e-113 413.3 262 82.1
Glyma.03G175800 Glycine max HOM05D005959 ORTHO05D007263 1.4e-113 413.3 262 81.7
TPR.G21452 Trifolium pratense HOM05D005959 ORTHO05D007263 1.4e-113 413.3 263 82.5
AL4G33710 Arabidopsis lyrata HOM05D005959 ORTHO05D007263 1.8e-113 412.9 264 81.4
Aqoxy2G00899 Aquilegia oxysepala HOM05D005959 ORTHO05D007263 2.4e-113 412.5 259 83.8
Phvul.001G172900 Phaseolus vulgaris HOM05D005959 ORTHO05D007263 2.4e-113 412.5 262 81.7
A04p28510 Brassica napus HOM05D005959 ORTHO05D007263 3.1e-113 412.1 259 82.6
BraA04t18329Z Brassica rapa HOM05D005959 ORTHO05D007263 3.1e-113 412.1 259 82.6
Lj1g0020453 Lotus japonicus HOM05D005959 ORTHO05D007263 3.1e-113 412.1 261 82.4
Psat0s1952g0120 Pisum sativum HOM05D005959 ORTHO05D007263 3.1e-113 412.1 263 81.7
Sabra16G0089800 Salix brachista HOM05D005959 ORTHO05D007263 3.1e-113 412.1 264 83.3
C04p65830 Brassica napus HOM05D005959 ORTHO05D007263 4.1e-113 411.8 259 82.6
CARHR132260 Cardamine hirsuta HOM05D005959 ORTHO05D007263 4.1e-113 411.8 264 80.3
arahy.Tifrunner.gnm1.ann1.T45XFJ Arachis hypogaea HOM05D005959 ORTHO05D007263 9.1e-113 410.6 262 81.7
CSS0020892 Camellia sinensis var. sinensis HOM05D005959 ORTHO05D007263 1.2e-112 410.2 265 79.2
Sp4g19650 Schrenkiella parvula HOM05D005959 ORTHO05D007263 1.6e-112 409.8 262 80.9
Lalb_Chr25g0289351 Lupinus albus HOM05D005959 ORTHO05D007263 2.0e-112 409.5 263 81.4
BcaC02g07517 Brassica carinata HOM05D005959 ORTHO05D007263 2.6e-112 409.1 259 82.2
BolC4t28086H Brassica oleracea HOM05D005959 ORTHO05D007263 2.6e-112 409.1 259 82.2
Sc01g0003780 Simmondsia chinensis HOM05D005959 ORTHO05D007263 4.5e-112 408.3 263 81.4
CDE07G0433 Ceratophyllum demersum HOM05D005959 ORTHO05D007263 5.9e-112 407.9 274 77.4
Lj2A103T72 Lonicera japonica HOM05D005959 ORTHO05D007263 5.9e-112 407.9 263 81.4
Hund12071 Selenicereus undatus HOM05D005959 ORTHO05D007263 7.7e-112 407.5 265 80.4
Sopen10g035320 Solanum pennellii HOM05D005959 ORTHO05D007263 7.7e-112 407.5 253 84.6
Medtr7g100160 Medicago truncatula HOM05D005959 ORTHO05D007263 1.0e-111 407.1 263 81.4
CsaV3_3G035240 Cucumis sativus L. HOM05D005959 ORTHO05D007263 1.3e-111 406.8 262 80.5
Lalb_Chr20g0113031 Lupinus albus HOM05D005959 ORTHO05D007263 2.2e-111 406.0 262 80.2
A05p08590 Brassica napus HOM05D005959 ORTHO05D007263 2.9e-111 405.6 262 80.2
unitig_578.g16043 Utricularia gibba HOM05D005959 ORTHO05D007263 2.9e-111 405.6 265 79.6
BraA05t19827Z Brassica rapa HOM05D005959 ORTHO05D007263 3.8e-111 405.2 262 79.8
MELO3C009294.2 Cucumis melo HOM05D005959 ORTHO05D007263 1.1e-110 403.7 262 80.5
Sed0012545 Sechium edule HOM05D005959 ORTHO05D007263 1.1e-110 403.7 263 80.2
Ah.15g091970 Amaranthus hybridus HOM05D005959 ORTHO05D007263 2.5e-110 402.5 265 80.0
BcaC02g11852 Brassica carinata HOM05D005959 ORTHO05D007263 2.5e-110 402.5 262 79.0
C04p10680 Brassica napus HOM05D005959 ORTHO05D007263 3.2e-110 402.1 260 80.0
BolC4t22661H Brassica oleracea HOM05D005959 ORTHO05D007263 3.2e-110 402.1 260 80.0
MBI14_g34528_MAGBIO Magnolia biondii HOM05D005959 ORTHO05D007263 7.2e-110 401.0 254 83.5
ECA233G2168 Erigeron canadensis HOM05D005959 ORTHO05D007263 1.6e-109 399.8 253 83.4
Aa31LG5G22650 Aethionema arabicum HOM05D005959 ORTHO05D007263 2.1e-109 399.4 265 77.7
vmacro20093 Vaccinium macrocarpon HOM05D005959 ORTHO05D007263 5.2e-108 394.8 287 77.4
CAN.G687.19 Capsicum annuum HOM05D005959 ORTHO05D007263 3.3e-107 392.1 241 84.6
PSO339G1263 Papaver somniferum HOM05D005959 ORTHO05D007263 4.4e-107 391.7 259 79.5
THA.LOC104823437 Tarenaya hassleriana HOM05D005959 ORTHO05D007263 4.4e-107 391.7 264 78.4
HPP92_021201 Vanilla planifolia HOM05D005959 ORTHO05D007263 4.4e-107 391.7 263 77.6
BcaB02g09288 Brassica carinata HOM05D005959 ORTHO05D007263 5.7e-107 391.3 262 77.9
CiPaw.09G185300 Carya illinoinensis HOM05D005959 ORTHO05D007263 1.3e-106 390.2 225 90.2
Aa31LG5G22670 Aethionema arabicum HOM05D005959 ORTHO05D007263 1.1e-105 387.1 253 79.4
PSO384G3658 Papaver somniferum HOM05D005959 ORTHO05D007263 1.1e-105 387.1 259 78.4
BcaB06g28984 Brassica carinata HOM05D005959 ORTHO05D007263 1.4e-105 386.7 251 80.5
Gohir.A04G077900 Gossypium hirsutum HOM05D005959 ORTHO05D007263 1.2e-104 383.6 286 75.2
SEGI_41460 Sequoiadendron giganteum HOM05D005959 ORTHO05D007263 4.5e-104 381.7 253 78.3
Os05g0119000 Oryza sativa ssp. japonica HOM05D005959 ORTHO05D007263 1.3e-103 380.2 258 76.7
Aa31LG5G22660 Aethionema arabicum HOM05D005959 ORTHO05D007263 2.2e-103 379.4 264 72.0
GSVIVG01025576001 Vitis vinifera HOM05D005959 ORTHO05D007263 1.2e-101 373.6 225 86.7
Cpa.g.sc114.24 Carica papaya HOM05D005959 ORTHO05D007263 3.6e-101 372.1 238 81.1
Hma1.2p1_0111F.1_g053390 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 2.0e-99 366.3 262 71.4
Eucgr.A01210 Eucalyptus grandis HOM05D005959 ORTHO05D007263 2.2e-98 362.8 265 72.8
AUR62041007 Chenopodium quinoa HOM05D005959 ORTHO05D007263 2.4e-97 359.4 265 74.3
Mapoly0099s0026 Marchantia polymorpha HOM05D005959 ORTHO05D007263 4.1e-97 358.6 262 72.5
Hma1.2p1_0111F.1_g053380 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 5.4e-97 358.2 262 70.6
Pp3c20_6820 Physcomitrium patens HOM05D005959 ORTHO05D007263 2.3e-95 352.8 255 72.5
AagrBONN_evm.TU.Sc2ySwM_344.2577 Anthoceros agrestis HOM05D005959 ORTHO05D007263 3.4e-91 339.0 253 69.6
COL.COLO4_10311 Corchorus olitorius HOM05D005959 ORTHO05D007263 1.4e-89 333.6 265 69.1
SMO271G0174 Selaginella moellendorffii HOM05D005959 ORTHO05D007263 3.5e-88 328.9 258 66.7
Dinv35677 Davidia involucrata HOM05D005959 ORTHO05D007263 1.0e-87 327.4 187 91.4
SEGI_29713 Sequoiadendron giganteum HOM05D005959 ORTHO05D007263 5.6e-86 321.6 252 69.0
Actinidia05285 Actinidia chinensis HOM05D005959 ORTHO05D007263 2.0e-67 260.0 179 74.9
CBR_g49882 Chara braunii HOM05D000019 ORTHO05D000048 7.5e-67 258.1 255 53.3
ClCG10G020740 Citrullus lanatus HOM05D005959 ORTHO05D007263 7.1e-65 251.5 151 86.8
Nitab4.5_0002073g0040 Nicotiana tabacum HOM05D005959 ORTHO05D007263 1.2e-64 250.8 265 57.0
Nn2g12822 Nelumbo nucifera HOM05D005959 ORTHO05D007263 3.9e-63 245.7 161 82.0
Actinidia11237 Actinidia chinensis HOM05D005959 ORTHO05D007263 3.1e-60 236.1 154 81.8
Actinidia19734 Actinidia chinensis HOM05D005959 ORTHO05D007263 3.1e-52 209.5 265 50.6
SMO364G0860 Selaginella moellendorffii HOM05D005959 ORTHO05D007263 4.2e-49 199.1 245 43.7
CBR_g3295 Chara braunii HOM05D005959 ORTHO05D007263 4.8e-45 185.7 250 40.8
AagrBONN_evm.TU.Sc2ySwM_344.2052 Anthoceros agrestis HOM05D005959 ORTHO05D007263 2.3e-39 166.8 234 40.2
CDE04G1398 Ceratophyllum demersum HOM05D004061 ORTHO05D004693 1.5e-35 154.1 98 77.6
Actinidia13264 Actinidia chinensis HOM05D005959 ORTHO05D007263 4.9e-34 149.1 96 81.2
AagrBONN_evm.TU.Sc2ySwM_344.389 Anthoceros agrestis HOM05D005959 ORTHO05D007263 1.4e-33 147.5 240 36.2
MD08G1090300 Malus domestica HOM05D005959 ORTHO05D007263 4.6e-32 142.5 118 69.5
Nn5g28122 Nelumbo nucifera HOM05D005959 ORTHO05D007263 1.3e-31 141.0 77 93.5
Nn1g07598 Nelumbo nucifera HOM05D005959 ORTHO05D007263 4.8e-29 132.5 75 89.3
Cre16.g673000 Chlamydomonas reinhardtii HOM05D005959 ORTHO05D007263 1.0e-23 114.8 233 36.1
TAR629G2669 Trochodendron aralioides HOM05D002023 ORTHO05D002049 3.9e-23 112.8 100 63.0
Oeu004323.1 Olea europaea HOM05D005959 ORTHO05D007263 3.4e-11 73.2 75 60.0


User provided reference genes

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