Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN05G0816 Fragaria x ananassa HOM05D004705 ORTHO05D005595 0.0e+00 1431.0 733 100.0
FAN02G3197 Fragaria x ananassa HOM05D004705 ORTHO05D005595 0.0e+00 1374.0 733 96.3
FAN09G0848 Fragaria x ananassa HOM05D004705 ORTHO05D005595 0.0e+00 1370.5 731 96.0
FvH4_6g30700 Fragaria vesca HOM05D004705 ORTHO05D005595 0.0e+00 1360.5 731 95.8
FAN14G4493 Fragaria x ananassa HOM05D004705 ORTHO05D005595 0.0e+00 1312.4 705 95.6
RcHm_v2.0_Chr2g0137071 Rosa chinensis HOM05D004705 ORTHO05D005595 0.0e+00 1262.3 732 88.8
Prupe.3G077300 Prunus persica HOM05D004705 ORTHO05D005595 0.0e+00 1092.4 732 76.4
MD17G1201400 Malus domestica HOM05D004705 ORTHO05D005595 3.7e-305 1051.2 753 74.0
Thecc.06G077700 Theobroma cacao HOM05D004705 ORTHO05D005595 1.7e-265 919.5 735 64.8
Potri.003G058600 Populus trichocarpa HOM05D004705 ORTHO05D005595 2.8e-265 918.7 742 65.2
Haze_16487 Corylus avellana HOM05D004705 ORTHO05D005595 2.1e-260 902.5 738 66.0
Cfa002032 Carpinus fangiana HOM05D004705 ORTHO05D005595 2.3e-259 899.0 736 66.2
QL05p026953 Quercus lobata HOM05D004705 ORTHO05D005595 6.8e-259 897.5 745 65.2
Duzib235G0494 Durio zibethinus HOM05D004705 ORTHO05D005595 9.8e-258 893.6 736 65.2
Dinv38075 Davidia involucrata HOM05D004705 ORTHO05D005595 9.2e-256 887.1 796 61.8
Ciclev10024977m.g Citrus clementina HOM05D004705 ORTHO05D005595 3.9e-254 881.7 750 64.5
Manes.04G119400 Manihot esculenta HOM05D004705 ORTHO05D005595 3.9e-254 881.7 739 64.1
Potri.001G175500 Populus trichocarpa HOM05D004705 ORTHO05D005595 4.3e-253 878.2 716 64.8
Atru.chr1.3167 Acer truncatum HOM05D004705 ORTHO05D005595 2.1e-252 875.9 738 62.5
Duzib160G0698 Durio zibethinus HOM05D004705 ORTHO05D005595 7.5e-250 867.5 721 64.1
Gohir.A02G124100 Gossypium hirsutum HOM05D004705 ORTHO05D005595 6.4e-249 864.4 737 63.0
CiPaw.01G242500 Carya illinoinensis HOM05D004705 ORTHO05D005595 1.9e-248 862.8 742 63.7
Gohir.D03G064900 Gossypium hirsutum HOM05D004705 ORTHO05D005595 4.7e-244 848.2 779 60.2
Gorai.002G057500 Gossypium raimondii HOM05D004705 ORTHO05D005595 1.2e-242 843.6 779 59.9
CANSAT56G4120 Cannabis sativa HOM05D004705 ORTHO05D005595 3.4e-242 842.0 756 62.0
ClCG07G012910 Citrullus lanatus HOM05D004705 ORTHO05D005595 4.4e-242 841.6 744 61.3
GSVIVG01017208001 Vitis vinifera HOM05D004705 ORTHO05D005595 1.4e-240 836.6 736 62.2
MELO3C012944.2 Cucumis melo HOM05D004705 ORTHO05D005595 5.4e-240 834.7 743 61.0
TWI75G0140 Tripterygium wilfordii HOM05D004705 ORTHO05D005595 7.1e-240 834.3 748 60.3
CsaV3_3G026670 Cucumis sativus L. HOM05D004705 ORTHO05D005595 3.0e-238 828.9 739 60.4
Glyma.15G011700 Glycine max HOM05D004705 ORTHO05D005595 1.3e-233 813.5 763 59.0
vmacro16932 Vaccinium macrocarpon HOM05D004705 ORTHO05D005595 3.8e-233 812.0 809 56.6
Dinv30551 Davidia involucrata HOM05D004705 ORTHO05D005595 8.4e-233 810.8 740 60.5
Phvul.005G173800 Phaseolus vulgaris HOM05D004705 ORTHO05D005595 1.1e-232 810.4 742 58.9
CSS0001459 Camellia sinensis var. sinensis HOM05D004705 ORTHO05D005595 1.9e-232 809.7 777 58.2
CSS0020826 Camellia sinensis var. sinensis HOM05D004705 ORTHO05D005595 1.9e-232 809.7 777 58.0
Sed0012410 Sechium edule HOM05D004705 ORTHO05D005595 2.1e-231 806.2 743 58.1
Lj3g0018532 Lotus japonicus HOM05D004705 ORTHO05D005595 1.7e-230 803.1 737 59.3
TAR626G1984 Trochodendron aralioides HOM05D004705 ORTHO05D005595 2.1e-228 796.2 757 58.3
PGR031G3493 Punica granatum HOM05D004705 ORTHO05D005595 2.8e-228 795.8 748 61.2
Manes.11G049500 Manihot esculenta HOM05D004705 ORTHO05D005595 4.7e-228 795.0 627 65.6
Cc04_g03760 Coffea canephora HOM05D004705 ORTHO05D005595 1.4e-227 793.5 815 55.1
PGSC0003DMG400005697 Solanum tuberosum HOM05D004705 ORTHO05D005595 1.2e-223 780.4 823 54.4
Oeu051920.1 Olea europaea HOM05D004705 ORTHO05D005595 8.7e-222 774.2 822 54.9
Sopen03g038820 Solanum pennellii HOM05D004705 ORTHO05D005595 3.3e-221 772.3 823 53.5
Solyc03g119940.3 Solanum lycopersicum HOM05D004705 ORTHO05D005595 2.1e-220 769.6 823 53.3
CAN.G438.96 Capsicum annuum HOM05D004705 ORTHO05D005595 2.8e-220 769.2 813 54.5
ECA247G3649 Erigeron canadensis HOM05D004705 ORTHO05D005595 3.6e-220 768.8 805 54.8
Nn8g39334 Nelumbo nucifera HOM05D004705 ORTHO05D005595 3.6e-220 768.8 744 56.6
Sp3g13840 Schrenkiella parvula HOM05D004705 ORTHO05D005595 1.4e-219 766.9 739 56.2
Peaxi162Scf00015g00532 Petunia axillaris HOM05D004705 ORTHO05D005595 1.5e-218 763.5 839 52.8
RhsimUnG0009400 Rhododendron simsii HOM05D004705 ORTHO05D005595 1.5e-218 763.5 851 53.5
Glyma.13G362100 Glycine max HOM05D004705 ORTHO05D005595 2.6e-218 762.7 748 57.4
Lj5A66T57 Lonicera japonica HOM05D004705 ORTHO05D005595 4.9e-217 758.4 813 54.0
Rhsim12G0195000 Rhododendron simsii HOM05D004705 ORTHO05D005595 2.4e-216 756.1 851 53.1
HanXRQChr02g0032571 Helianthus annuus HOM05D004705 ORTHO05D005595 7.1e-216 754.6 781 55.2
Ca_01096_v3 Cicer arietinum L. HOM05D004705 ORTHO05D005595 9.3e-216 754.2 707 59.1
Nitab4.5_0004817g0040 Nicotiana tabacum HOM05D004705 ORTHO05D005595 2.7e-215 752.7 816 52.9
TAR383G1056 Trochodendron aralioides HOM05D004705 ORTHO05D005595 4.6e-215 751.9 757 55.5
DCAR_025463 Daucus carota HOM05D004705 ORTHO05D005595 1.8e-214 750.0 826 52.5
Medtr2g102680 Medicago truncatula HOM05D004705 ORTHO05D005595 1.8e-214 750.0 726 58.1
SGA_v2.0_scaffold153G36966 Striga asiatica HOM05D004705 ORTHO05D005595 2.3e-214 749.6 781 54.8
Aqoxy7G01953 Aquilegia oxysepala HOM05D004705 ORTHO05D005595 1.9e-213 746.5 774 54.7
Cpa.g.c32383.1 Carica papaya HOM05D004705 ORTHO05D005595 3.3e-213 745.7 688 59.4
Sabra01G0137000 Salix brachista HOM05D004705 ORTHO05D005595 1.3e-212 743.8 707 57.6
EL10Ac9g21966 Beta vulgaris HOM05D004705 ORTHO05D005595 4.8e-212 741.9 784 54.3
Lsat_1_v5_gn_1_33801 Lactuca sativa HOM05D004705 ORTHO05D005595 5.3e-211 738.4 779 55.5
Lalb_Chr24g0395661 Lupinus albus HOM05D004705 ORTHO05D005595 1.2e-210 737.3 660 60.0
TPR.G37249 Trifolium pratense HOM05D004705 ORTHO05D005595 2.0e-210 736.5 754 55.3
Carub.0003s1530 Capsella rubella HOM05D004705 ORTHO05D005595 5.8e-210 734.9 741 54.9
AUR62016408 Chenopodium quinoa HOM05D004705 ORTHO05D005595 1.3e-209 733.8 795 53.3
Hund00574 Selenicereus undatus HOM05D004705 ORTHO05D005595 6.4e-209 731.5 752 55.9
AL3G28180 Arabidopsis lyrata HOM05D004705 ORTHO05D005595 8.4e-209 731.1 743 53.6
AT3G15550 Arabidopsis thaliana HOM05D004705 ORTHO05D005595 1.1e-208 730.7 748 53.3
CARHR090640 Cardamine hirsuta HOM05D004705 ORTHO05D005595 1.1e-208 730.7 736 54.3
Aa31LG8G2800 Aethionema arabicum HOM05D004705 ORTHO05D005595 7.1e-208 728.0 740 54.9
THA.LOC104818041 Tarenaya hassleriana HOM05D004705 ORTHO05D005595 7.1e-208 728.0 745 54.8
Eucgr.J03029 Eucalyptus grandis HOM05D004705 ORTHO05D005595 6.0e-207 724.9 718 57.1
COL.COLO4_12857 Corchorus olitorius HOM05D004705 ORTHO05D005595 3.0e-206 722.6 739 54.8
MSTRG.20727 Avicennia marina HOM05D004705 ORTHO05D005595 3.3e-205 719.2 828 51.1
A05p33830 Brassica napus HOM05D004705 ORTHO05D005595 4.3e-205 718.8 745 54.1
VMungo1080G1183 Vigna mungo HOM05D004705 ORTHO05D005595 1.0e-201 707.6 740 54.3
Oeu000022.1 Olea europaea HOM05D004705 ORTHO05D005595 1.7e-201 706.8 811 50.6
Lalb_Chr22g0351091 Lupinus albus HOM05D004705 ORTHO05D005595 2.2e-201 706.4 719 55.8
C05p51460 Brassica napus HOM05D004705 ORTHO05D005595 2.9e-201 706.1 740 53.8
BraA01t03898Z Brassica rapa HOM05D004705 ORTHO05D005595 2.9e-201 706.1 737 54.1
Thhalv10020202m.g Eutrema salsugineum HOM05D004705 ORTHO05D005595 6.5e-201 704.9 734 53.8
arahy.Tifrunner.gnm1.ann1.1G4SNU Arachis hypogaea HOM05D004705 ORTHO05D005595 8.4e-201 704.5 736 53.8
C01p48810 Brassica napus HOM05D004705 ORTHO05D005595 1.9e-200 703.4 743 53.8
A01p38480 Brassica napus HOM05D004705 ORTHO05D005595 5.5e-200 701.8 737 53.7
BcaC05g28954 Brassica carinata HOM05D004705 ORTHO05D005595 7.1e-200 701.4 741 53.7
Psat5g299960 Pisum sativum HOM05D004705 ORTHO05D005595 1.2e-199 700.7 601 61.7
BcaB06g29595 Brassica carinata HOM05D004705 ORTHO05D005595 3.5e-199 699.1 737 53.2
PSO170G5959 Papaver somniferum HOM05D004705 ORTHO05D005595 4.6e-199 698.7 745 53.0
PSO017G1026 Papaver somniferum HOM05D004705 ORTHO05D005595 1.3e-198 697.2 742 53.0
BcaC09g48528 Brassica carinata HOM05D004705 ORTHO05D005595 2.3e-198 696.4 742 53.1
BolC1t04836H Brassica oleracea HOM05D004705 ORTHO05D005595 3.9e-198 695.7 740 53.4
SalBow5G4930 Salvia bowleyana HOM05D004705 ORTHO05D005595 6.7e-198 694.9 657 56.9
arahy.Tifrunner.gnm1.ann1.WXP04W Arachis hypogaea HOM05D004705 ORTHO05D005595 1.5e-197 693.7 736 52.7
AUR62011594 Chenopodium quinoa HOM05D004705 ORTHO05D005595 1.4e-195 687.2 618 59.9
arahy.Tifrunner.gnm1.ann1.HFN88V Arachis hypogaea HOM05D004705 ORTHO05D005595 4.5e-194 682.2 716 55.7
BraA05t22205Z Brassica rapa HOM05D004705 ORTHO05D005595 2.2e-193 679.9 739 52.0
BcaB04g20914 Brassica carinata HOM05D004705 ORTHO05D005595 8.5e-193 677.9 740 52.7
MSTRG.17159 Avicennia marina HOM05D004705 ORTHO05D005595 5.5e-192 675.2 826 48.8
Sc12g0008970 Simmondsia chinensis HOM05D004705 ORTHO05D005595 4.6e-191 672.2 778 50.8
MBI04_g43364_MAGBIO Magnolia biondii HOM05D004705 ORTHO05D005595 3.3e-189 666.0 848 49.1
BolC5t33833H Brassica oleracea HOM05D004705 ORTHO05D005595 3.7e-188 662.5 747 51.4
Lalb_Chr25g0279551 Lupinus albus HOM05D004705 ORTHO05D005595 9.1e-179 631.3 709 51.9
arahy.Tifrunner.gnm1.ann1.AD4PBH Arachis hypogaea HOM05D004705 ORTHO05D005595 1.9e-176 623.6 716 52.7
Nn2g11880 Nelumbo nucifera HOM05D004705 ORTHO05D005595 2.6e-173 613.2 635 54.6
unitig_26.g8885 Utricularia gibba HOM05D004705 ORTHO05D005595 4.8e-172 609.0 634 52.8
Zm00001eb122560 Zea mays HOM05D004705 ORTHO05D005595 9.4e-168 594.7 837 45.0
Os01g0176500 Oryza sativa ssp. japonica HOM05D004705 ORTHO05D005595 4.0e-166 589.3 849 44.1
Nitab4.5_0000410g0340 Nicotiana tabacum HOM05D004705 ORTHO05D005595 2.6e-165 586.6 445 65.4
ATR0083G057 Amborella trichopoda HOM05D004705 ORTHO05D005595 9.7e-165 584.7 846 44.8
CDE01G0719 Ceratophyllum demersum HOM05D004705 ORTHO05D005595 6.5e-153 545.4 725 46.2
Migut.B01589 Erythranthe guttata HOM05D004705 ORTHO05D005595 3.6e-151 539.7 758 45.3
Ah.01g021140 Amaranthus hybridus HOM05D004705 ORTHO05D005595 7.8e-146 521.9 766 43.1
THA.LOC104812485 Tarenaya hassleriana HOM05D004705 ORTHO05D005595 6.1e-143 512.3 502 54.2
unitig_61.g26415 Utricularia gibba HOM05D004705 ORTHO05D005595 1.7e-132 477.6 511 53.4
SEGI_27484 Sequoiadendron giganteum HOM05D004705 ORTHO05D005595 3.5e-114 416.8 767 38.2
SEGI_13982 Sequoiadendron giganteum HOM05D004705 ORTHO05D005595 1.1e-102 378.6 463 47.7
MBI01_g15493_MAGBIO Magnolia biondii HOM05D004705 ORTHO05D005595 4.5e-101 373.2 771 35.3
Actinidia16007 Actinidia chinensis HOM05D004705 ORTHO05D005595 3.5e-90 337.0 301 57.1
AagrBONN_evm.TU.Sc2ySwM_228.3613 Anthoceros agrestis HOM05D004705 ORTHO05D005595 4.8e-87 326.6 671 35.2
Pp3c13_19170 Physcomitrium patens HOM05D004705 ORTHO05D005595 5.3e-86 323.2 488 40.6
Pp3c8_15560 Physcomitrium patens HOM05D004705 ORTHO05D005595 5.3e-86 323.2 481 40.7
Pp3c23_2990 Physcomitrium patens HOM05D004705 ORTHO05D005595 1.3e-84 318.5 479 41.1
CDE02G1329 Ceratophyllum demersum HOM05D004705 ORTHO05D005595 3.5e-82 310.5 497 39.8
Pp3c23_18290 Physcomitrium patens HOM05D004705 ORTHO05D005595 1.6e-79 301.6 433 39.7
Pp3c20_1400 Physcomitrium patens HOM05D004705 ORTHO05D005595 4.8e-79 300.1 482 38.4
Pp3c20_1403 Physcomitrium patens HOM05D004705 ORTHO05D005595 4.8e-79 300.1 482 38.4
Pp3c8_22450 Physcomitrium patens HOM05D004705 ORTHO05D005595 8.2e-79 299.3 483 38.3
Pp3c24_17130 Physcomitrium patens HOM05D004705 ORTHO05D005595 6.5e-76 289.7 467 40.0
MBI04_g47892_MAGBIO Magnolia biondii HOM05D004705 ORTHO05D005595 9.4e-75 285.8 519 42.4
SHI09686 Sapria himalayana HOM05D004705 ORTHO05D005595 5.5e-67 260.0 610 36.2
Lj8C335T16 Lonicera japonica HOM05D004705 ORTHO05D005595 9.4e-67 259.2 380 44.7
SMO147G0411 Selaginella moellendorffii HOM05D004705 ORTHO05D005595 1.2e-53 215.7 196 51.5
Actinidia08822 Actinidia chinensis HOM05D004705 ORTHO05D005595 3.1e-46 191.0 204 54.4
Actinidia16006 Actinidia chinensis HOM05D004705 ORTHO05D005595 8.0e-34 149.8 397 35.5
BcaC09g48527 Brassica carinata HOM05D004705 ORTHO05D005595 9.2e-30 136.3 92 64.1
Nitab4.5_0000410g0350 Nicotiana tabacum HOM05D004705 ORTHO05D005595 2.1e-26 125.2 423 30.5
FAN08G3635 Fragaria x ananassa HOM05D004705 ORTHO05D000113 3.5e-21 107.8 74 71.6
FAN15G3749 Fragaria x ananassa HOM05D005026 ORTHO05D005981 3.5e-21 107.8 74 71.6
FAN21G1601 Fragaria x ananassa HOM05D000031 ORTHO05D000030 4.6e-21 107.5 63 76.2
FAN07G2703 Fragaria x ananassa HOM05D004705 ORTHO05D005595 3.9e-20 104.4 77 63.6
Medtr1g107505 Medicago truncatula HOM05D004705 ORTHO05D005595 1.9e-19 102.1 71 70.4
GSVIVG01017207001 Vitis vinifera HOM05D029100 ORTHO05D016439 4.7e-18 97.4 81 56.8
MBI04_g47893_MAGBIO Magnolia biondii HOM05D004705 ORTHO05D005595 4.4e-16 90.9 208 34.1
Cpa.g.c42332 Carica papaya HOM05D004705 ORTHO05D005595 1.2e-13 82.8 53 66.0
Actinidia08821 Actinidia chinensis HOM05D004705 ORTHO05D005595 4.4e-08 64.3 329 26.7
Medtr1g041460 Medicago truncatula HOM05D004705 ORTHO05D005595 9.9e-08 63.2 49 63.3
Ah.06g184670 Amaranthus hybridus HOM05D004705 ORTHO05D005595 4.9e-07 60.8 44 68.2
unitig_26.g8886 Utricularia gibba HOM05D004705 ORTHO05D005595 3.2e-06 58.2 75 48.0


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