Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN05G0792 Fragaria x ananassa HOM05D007555 ORTHO05D009521 1.2e-94 349.7 165 100.0
FvH4_6g14780 Fragaria vesca HOM05D007555 ORTHO05D009521 3.8e-93 344.7 165 98.8
FAN14G0454 Fragaria x ananassa HOM05D007555 ORTHO05D009521 3.8e-93 344.7 165 98.8
FAN09G3476 Fragaria x ananassa HOM05D007555 ORTHO05D009521 3.0e-90 335.1 162 96.3
RcHm_v2.0_Chr3g0468011 Rosa chinensis HOM05D007555 ORTHO05D009521 1.6e-86 322.8 165 90.9
MD12G1131600 Malus domestica HOM05D007555 ORTHO05D009521 4.5e-70 268.1 169 74.6
Prupe.6G246000 Prunus persica HOM05D007555 ORTHO05D009521 7.7e-70 267.3 167 73.7
Thecc.05G049100 Theobroma cacao HOM05D007555 ORTHO05D009521 8.9e-58 227.3 170 61.8
Potri.006G215300 Populus trichocarpa HOM05D007555 ORTHO05D009521 1.2e-57 226.9 168 61.9
Haze_20696 Corylus avellana HOM05D007555 ORTHO05D009521 8.3e-56 220.7 155 61.3
Dinv37229 Davidia involucrata HOM05D007555 ORTHO05D009521 5.4e-55 218.0 166 60.2
TWI53G2115 Tripterygium wilfordii HOM05D007555 ORTHO05D009521 9.2e-55 217.2 163 62.0
Actinidia05288 Actinidia chinensis HOM05D007555 ORTHO05D009521 1.6e-54 216.5 173 60.1
Hma1.2p1_0111F.1_g053420 Hydrangea macrophylla HOM05D007555 ORTHO05D009521 1.6e-54 216.5 138 68.8
QL07p045973 Quercus lobata HOM05D007555 ORTHO05D009521 1.6e-54 216.5 164 61.0
Migut.L01641 Erythranthe guttata HOM05D007555 ORTHO05D009521 2.0e-54 216.1 172 57.0
Sabra06G0166200 Salix brachista HOM05D007555 ORTHO05D009521 2.7e-54 215.7 163 60.1
SGA_v2.0_scaffold94G28647 Striga asiatica HOM05D007555 ORTHO05D009521 1.3e-53 213.4 169 59.8
MSTRG.26743 Avicennia marina HOM05D007555 ORTHO05D009521 1.7e-53 213.0 166 61.4
Eucgr.A01211 Eucalyptus grandis HOM05D007555 ORTHO05D009521 2.3e-53 212.6 159 62.9
Glyma.13G134800 Glycine max HOM05D007555 ORTHO05D009521 2.3e-53 212.6 160 61.2
ClCG04G008630 Citrullus lanatus HOM05D007555 ORTHO05D009521 3.0e-53 212.2 167 60.5
Manes.08G000300 Manihot esculenta HOM05D007555 ORTHO05D009521 3.9e-53 211.8 159 61.6
Cpa.g.sc114.21 Carica papaya HOM05D007555 ORTHO05D009521 8.6e-53 210.7 166 56.0
Gohir.D01G207300 Gossypium hirsutum HOM05D007555 ORTHO05D009521 1.1e-52 210.3 168 56.5
Gorai.002G252400 Gossypium raimondii HOM05D007555 ORTHO05D009521 1.5e-52 209.9 168 56.5
Lj5g0027152 Lotus japonicus HOM05D007555 ORTHO05D009521 1.5e-52 209.9 163 62.0
CsaV3_4G024530 Cucumis sativus L. HOM05D007555 ORTHO05D009521 2.5e-52 209.1 162 61.7
Gohir.A01G218500 Gossypium hirsutum HOM05D007555 ORTHO05D009521 4.3e-52 208.4 168 56.5
Ciclev10012844m.g Citrus clementina HOM05D007555 ORTHO05D009521 7.3e-52 207.6 177 55.9
Sed0003448 Sechium edule HOM05D007555 ORTHO05D009521 9.5e-52 207.2 165 58.8
Cfa017464 Carpinus fangiana HOM05D007555 ORTHO05D009521 1.2e-51 206.8 159 59.1
GSVIVG01025579001 Vitis vinifera HOM05D007555 ORTHO05D009521 1.2e-51 206.8 132 68.2
Nn2g12825 Nelumbo nucifera HOM05D000419 ORTHO05D000692 2.1e-51 206.1 157 58.0
Medtr1g067330 Medicago truncatula HOM05D007555 ORTHO05D009521 3.6e-51 205.3 162 58.6
vmacro08680 Vaccinium macrocarpon HOM05D007555 ORTHO05D009521 4.7e-51 204.9 168 54.8
Phvul.007G161000 Phaseolus vulgaris HOM05D007555 ORTHO05D009521 8.1e-51 204.1 165 55.2
Ah.01g007300 Amaranthus hybridus HOM05D007555 ORTHO05D009521 1.1e-50 203.8 143 60.1
PGR004G0254 Punica granatum HOM05D007555 ORTHO05D009521 1.1e-50 203.8 164 59.1
CAN.G350.37 Capsicum annuum HOM05D007555 ORTHO05D009521 1.8e-50 203.0 150 62.0
Nitab4.5_0006252g0040 Nicotiana tabacum HOM05D007555 ORTHO05D009521 1.8e-50 203.0 149 63.1
VMungo0720G3150 Vigna mungo HOM05D007555 ORTHO05D009521 2.3e-50 202.6 169 55.0
MELO3C003085.2 Cucumis melo HOM05D007555 ORTHO05D009521 3.1e-50 202.2 164 60.4
THA.LOC104816299 Tarenaya hassleriana HOM05D007555 ORTHO05D009521 3.1e-50 202.2 164 56.1
Psat6g069400 Pisum sativum HOM05D007555 ORTHO05D009521 5.2e-50 201.4 146 58.9
Nitab4.5_0000643g0170 Nicotiana tabacum HOM05D007555 ORTHO05D009521 1.2e-49 200.3 143 62.2
ATR0693G428 Amborella trichopoda HOM05D007555 ORTHO05D009521 2.0e-49 199.5 155 60.0
BraA10t45337Z Brassica rapa HOM05D007555 ORTHO05D009521 2.0e-49 199.5 169 56.8
Atru.chr8.2503 Acer truncatum HOM05D007555 ORTHO05D009521 3.4e-49 198.7 132 64.4
AUR62030924 Chenopodium quinoa HOM05D007555 ORTHO05D009521 3.4e-49 198.7 126 65.9
Aqoxy2G01932 Aquilegia oxysepala HOM05D007555 ORTHO05D009521 5.8e-49 198.0 130 63.1
A10p33000 Brassica napus HOM05D007555 ORTHO05D009521 5.8e-49 198.0 169 55.0
Hund06478 Selenicereus undatus HOM05D007555 ORTHO05D009521 7.5e-49 197.6 127 64.6
HanXRQChr07g0204191 Helianthus annuus HOM05D007555 ORTHO05D009521 1.7e-48 196.4 144 63.2
EL10Ac9g22121 Beta vulgaris HOM05D007555 ORTHO05D009521 2.2e-48 196.1 126 64.3
CARHR210660 Cardamine hirsuta HOM05D007555 ORTHO05D009521 2.2e-48 196.1 164 56.7
PSO339G2355 Papaver somniferum HOM05D007555 ORTHO05D009521 2.9e-48 195.7 145 60.0
BcaC06g32006 Brassica carinata HOM05D007555 ORTHO05D009521 3.7e-48 195.3 166 56.0
DCAR_017749 Daucus carota HOM05D007555 ORTHO05D009521 3.7e-48 195.3 143 58.7
Solyc09g006000.3 Solanum lycopersicum HOM05D007555 ORTHO05D009521 3.7e-48 195.3 180 50.0
C09p73970 Brassica napus HOM05D007555 ORTHO05D009521 4.9e-48 194.9 152 56.6
PSO384G0825 Papaver somniferum HOM05D007555 ORTHO05D009521 8.3e-48 194.1 145 60.0
arahy.Tifrunner.gnm1.ann1.ASDQ9T Arachis hypogaea HOM05D007555 ORTHO05D009521 1.9e-47 193.0 165 52.7
Thhalv10014815m.g Eutrema salsugineum HOM05D007555 ORTHO05D009521 1.9e-47 193.0 167 55.7
Carub.0006s0147 Capsella rubella HOM05D007555 ORTHO05D009521 3.2e-47 192.2 168 56.5
CiPaw.09G185700 Carya illinoinensis HOM05D007555 ORTHO05D009521 4.1e-47 191.8 156 56.4
Cc06_g03250 Coffea canephora HOM05D007555 ORTHO05D009521 4.1e-47 191.8 124 61.3
arahy.Tifrunner.gnm1.ann1.UIJ5I4 Arachis hypogaea HOM05D007555 ORTHO05D009521 5.4e-47 191.4 166 51.8
BolC9t60132H Brassica oleracea HOM05D007555 ORTHO05D009521 5.4e-47 191.4 168 53.0
AT5G02710 Arabidopsis thaliana HOM05D007555 ORTHO05D009521 9.2e-47 190.7 173 53.2
TPR.G7549 Trifolium pratense HOM05D007555 ORTHO05D009521 9.2e-47 190.7 118 65.3
AL6G11950 Arabidopsis lyrata HOM05D007555 ORTHO05D009521 1.6e-46 189.9 152 55.9
BcaNung03281 Brassica carinata HOM05D007555 ORTHO05D009521 1.6e-46 189.9 168 52.4
ECA238G3221 Erigeron canadensis HOM05D000025 ORTHO05D000040 2.1e-46 189.5 137 57.7
Aa31LG1G22170 Aethionema arabicum HOM05D007555 ORTHO05D009521 7.8e-46 187.6 148 57.4
unitig_0.g697 Utricularia gibba HOM05D000139 ORTHO05D009521 1.9e-44 183.0 141 59.6
SEGI_01945 Sequoiadendron giganteum HOM05D007555 ORTHO05D009521 2.5e-44 182.6 161 55.3
FAN02G2228 Fragaria x ananassa HOM05D007555 ORTHO05D009521 2.8e-43 179.1 89 95.5
Lsat_1_v5_gn_2_111420 Lactuca sativa HOM05D007555 ORTHO05D009521 2.8e-43 179.1 109 69.7
CDE05G2937 Ceratophyllum demersum HOM05D007555 ORTHO05D009521 3.1e-42 175.6 125 57.6
Sc08g0004110 Simmondsia chinensis HOM05D007555 ORTHO05D009521 3.4e-41 172.2 116 63.8
Medtr0016s0020 Medicago truncatula HOM05D007555 ORTHO05D009521 4.4e-41 171.8 131 59.5
Lj2P231T24 Lonicera japonica HOM05D007555 ORTHO05D009521 9.9e-41 170.6 104 67.3
Sp6g39860 Schrenkiella parvula HOM05D007555 ORTHO05D009521 1.1e-39 167.2 137 56.9
Zm00001eb017700 Zea mays HOM05D007555 ORTHO05D009521 3.9e-37 158.7 118 54.2
Os03g0363400 Oryza sativa ssp. japonica HOM05D007555 ORTHO05D009521 1.6e-35 153.3 120 54.2
C02p41790 Brassica napus HOM05D007555 ORTHO05D009521 6.2e-35 151.4 149 48.3
BcaC09g50387 Brassica carinata HOM05D007555 ORTHO05D009521 4.0e-34 148.7 168 45.8
PGSC0003DMG400023920 Solanum tuberosum HOM05D007555 ORTHO05D009521 8.9e-34 147.5 193 43.0
BcaC03g16355 Brassica carinata HOM05D007555 ORTHO05D009521 1.2e-33 147.1 149 47.7
BolC1t02552H Brassica oleracea HOM05D007555 ORTHO05D009521 2.6e-33 146.0 162 45.7
C01p26070 Brassica napus HOM05D007555 ORTHO05D009521 9.9e-33 144.1 162 45.7
Pp3c1_22520 Physcomitrium patens HOM05D007555 ORTHO05D009521 4.9e-32 141.7 113 53.1
Lalb_Chr02g0153411 Lupinus albus HOM05D007555 ORTHO05D009521 6.0e-30 134.8 87 65.5
Peaxi162Scf00597g00516 Petunia axillaris HOM05D007555 ORTHO05D009521 6.6e-29 131.3 127 50.4
TAR636G0687 Trochodendron aralioides HOM05D007555 ORTHO05D009521 2.1e-27 126.3 122 50.8
COL.COLO4_10316 Corchorus olitorius HOM05D007555 ORTHO05D009521 3.4e-17 92.4 77 57.1
Lalb_Chr02g0153401 Lupinus albus HOM05D007555 ORTHO05D009521 8.4e-16 87.8 56 71.4
SEGI_05937 Sequoiadendron giganteum HOM05D007555 ORTHO05D009521 1.9e-15 86.7 63 63.5
CSS0046800 Camellia sinensis var. sinensis HOM05D007555 ORTHO05D009521 3.2e-15 85.9 82 56.1
Lj2A103T67 Lonicera japonica HOM05D007555 ORTHO05D009521 1.3e-11 73.9 48 60.4


User provided reference genes

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