Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN05G0770 Fragaria x ananassa HOM05D008398 ORTHO05D005682 1.0e-240 836.3 412 100.0
FvH4_6g50450 Fragaria vesca HOM05D008398 ORTHO05D005682 3.2e-165 585.5 425 72.9
FAN14G4819 Fragaria x ananassa HOM05D008398 ORTHO05D005682 1.3e-161 573.5 434 70.5
FAN14G2930 Fragaria x ananassa HOM05D008398 ORTHO05D005682 4.2e-149 531.9 414 71.3
FAN09G2688 Fragaria x ananassa HOM05D008398 ORTHO05D005682 3.4e-130 469.2 391 68.8
FAN14G5053 Fragaria x ananassa HOM05D000539 ORTHO05D000592 1.8e-120 436.8 303 77.9
FvH4_6g28610 Fragaria vesca HOM05D008398 ORTHO05D005682 6.8e-115 418.3 270 80.0
FAN02G2570 Fragaria x ananassa HOM05D008398 ORTHO05D005682 8.0e-108 394.8 571 46.8
FAN05G1573 Fragaria x ananassa HOM05D008398 ORTHO05D005682 2.3e-99 366.7 192 92.7
FvH4_4g36820 Fragaria vesca HOM05D008398 ORTHO05D005682 3.4e-90 336.3 308 62.3
FAN14G3968 Fragaria x ananassa HOM05D008398 ORTHO05D005682 2.5e-77 293.5 162 91.4
RcHm_v2.0_Chr1g0379941 Rosa chinensis HOM05D008398 ORTHO05D005682 6.9e-75 285.4 438 45.7
FvH4_6g28541 Fragaria vesca HOM05D008398 ORTHO05D005682 9.9e-74 281.6 264 62.1
RcHm_v2.0_Chr1g0379901 Rosa chinensis HOM05D008398 ORTHO05D005682 2.9e-73 280.0 438 45.7
FvH4_5g34640 Fragaria vesca HOM05D008398 ORTHO05D005682 4.0e-59 233.0 420 41.0
FvH4_7g30461 Fragaria vesca HOM05D008398 ORTHO05D035411 1.2e-58 231.5 401 41.4
FvH4_7g30481 Fragaria vesca HOM05D008398 ORTHO05D029520 7.9e-55 218.8 407 40.3
FAN10G3441 Fragaria x ananassa HOM05D008398 ORTHO05D005682 1.8e-54 217.6 406 38.4
FAN10G3871 Fragaria x ananassa HOM05D008398 ORTHO05D005682 7.4e-53 212.2 409 38.6
FAN03G3290 Fragaria x ananassa HOM05D005400 ORTHO05D006668 1.2e-50 204.9 397 40.3
FAN06G0523 Fragaria x ananassa HOM05D008398 ORTHO05D005682 4.5e-50 203.0 386 39.6
FvH4_7g16534 Fragaria vesca HOM05D008398 ORTHO05D046322 3.8e-49 199.9 383 40.7
FAN18G3618 Fragaria x ananassa HOM05D008398 ORTHO05D005682 1.4e-48 198.0 428 38.1
FAN06G1253 Fragaria x ananassa HOM05D008398 ORTHO05D035236 1.9e-48 197.6 393 37.9
FAN01G0388 Fragaria x ananassa HOM05D008398 ORTHO05D035411 2.7e-47 193.7 330 41.2
FAN01G2094 Fragaria x ananassa HOM05D008398 ORTHO05D029494 6.7e-46 189.1 424 35.4
FAN06G3627 Fragaria x ananassa HOM05D008398 ORTHO05D005682 1.3e-44 184.9 389 38.8
FAN06G2579 Fragaria x ananassa HOM05D008398 ORTHO05D029494 3.7e-44 183.3 423 35.0
FAN06G1826 Fragaria x ananassa HOM05D008398 ORTHO05D035236 1.1e-43 181.8 354 39.3
FAN01G0845 Fragaria x ananassa HOM05D008398 ORTHO05D029520 1.8e-43 181.0 326 39.0
FAN06G0070 Fragaria x ananassa HOM05D008398 ORTHO05D029494 2.4e-43 180.6 423 34.8
FvH4_7g12650 Fragaria vesca HOM05D008398 ORTHO05D029494 3.4e-42 176.8 423 34.5
FvH4_7g30470 Fragaria vesca HOM05D008398 ORTHO05D046348 1.0e-41 175.3 377 39.5
FAN15G2539 Fragaria x ananassa HOM05D008398 ORTHO05D005682 1.7e-41 174.5 408 35.5
FAN03G1797 Fragaria x ananassa HOM05D008398 ORTHO05D029520 2.9e-41 173.7 330 38.8
FAN03G3131 Fragaria x ananassa HOM05D008398 ORTHO05D029520 2.9e-41 173.7 330 38.8
FAN01G2543 Fragaria x ananassa HOM05D008398 ORTHO05D046348 6.5e-41 172.6 351 40.5
FAN05G2135 Fragaria x ananassa HOM05D008398 ORTHO05D005682 2.7e-39 167.2 164 57.3
FAN10G3802 Fragaria x ananassa HOM05D008398 ORTHO05D035411 4.6e-39 166.4 310 40.3
FAN05G3589 Fragaria x ananassa HOM05D008398 ORTHO05D005682 5.1e-38 162.9 174 54.0
FAN06G2795 Fragaria x ananassa HOM05D008398 ORTHO05D046322 6.7e-38 162.5 307 41.0
FvH4_7g30731 Fragaria vesca HOM05D008398 ORTHO05D035236 3.3e-37 160.2 325 37.5
FAN14G3920 Fragaria x ananassa HOM05D008398 ORTHO05D005682 4.3e-37 159.8 160 61.9
RcHm_v2.0_Chr1g0376501 Rosa chinensis HOM05D008398 ORTHO05D005682 9.1e-35 152.1 345 36.8
FAN10G0863 Fragaria x ananassa HOM05D008398 ORTHO05D005682 2.2e-33 147.5 273 43.6
FvH4_7g16480 Fragaria vesca HOM05D008398 ORTHO05D046080 1.5e-29 134.8 327 33.9
RcHm_v2.0_Chr7g0225411 Rosa chinensis HOM05D006732 ORTHO05D005682 9.7e-29 132.1 350 35.1
FAN01G2752 Fragaria x ananassa HOM05D008398 ORTHO05D005682 1.1e-27 128.6 224 41.5
RcHm_v2.0_Chr2g0090631 Rosa chinensis HOM05D006732 ORTHO05D005682 3.5e-26 123.6 351 33.3
FvH4_5g09240 Fragaria vesca HOM05D006732 ORTHO05D005682 5.0e-25 119.8 327 32.4
FAN06G3071 Fragaria x ananassa HOM05D008398 ORTHO05D046080 8.5e-25 119.0 323 32.2
FAN08G0591 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.1e-24 118.6 327 32.1
FAN19G1623 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.9e-24 117.9 323 33.4
FvH4_5g06100 Fragaria vesca HOM05D008398 ORTHO05D005682 3.2e-24 117.1 187 43.9
FvH4_1g04982 Fragaria vesca HOM05D006732 ORTHO05D005682 5.5e-24 116.3 323 32.2
FAN11G1254 Fragaria x ananassa HOM05D000588 ORTHO05D000637 5.5e-24 116.3 67 88.1
FAN18G2797 Fragaria x ananassa HOM05D006732 ORTHO05D005682 9.4e-24 115.5 351 30.2
FAN03G2566 Fragaria x ananassa HOM05D008398 ORTHO05D005682 8.0e-23 112.5 197 41.6
FvH4_1g04980 Fragaria vesca HOM05D006732 ORTHO05D005682 1.0e-22 112.1 314 32.2
FAN19G1364 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.4e-22 111.7 314 32.2
FAN23G0359 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.8e-22 111.3 314 31.8
FAN26G0599 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.8e-22 111.3 419 29.8
FAN23G1399 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.2e-22 109.8 377 30.0
FAN23G2814 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.2e-22 109.8 377 30.0
FAN26G1852 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.3e-21 107.1 326 31.3
FvH4_1g04650 Fragaria vesca HOM05D006732 ORTHO05D005682 1.3e-20 105.1 317 30.3
FAN03G1279 Fragaria x ananassa HOM05D008398 ORTHO05D005682 8.2e-20 102.4 171 42.7
FvH4_1g07310 Fragaria vesca HOM05D006732 ORTHO05D005682 3.1e-19 100.5 327 32.1
FvH4_1g07350 Fragaria vesca HOM05D006732 ORTHO05D005682 3.1e-19 100.5 327 32.1
FAN19G1839 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.3e-19 99.8 318 30.5
FAN13G2469 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.5e-18 96.7 284 29.9
FAN26G0144 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.5e-18 96.7 326 31.0
FAN19G0608 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.9e-18 96.3 251 32.3
RcHm_v2.0_Chr2g0088891 Rosa chinensis HOM05D006732 ORTHO05D005682 1.0e-17 95.5 363 29.5
FvH4_1g05020 Fragaria vesca HOM05D006732 ORTHO05D005682 1.7e-17 94.7 299 29.4
FAN23G0913 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.7e-17 94.7 334 30.8
RcHm_v2.0_Chr2g0090681 Rosa chinensis HOM05D006732 ORTHO05D005682 2.9e-17 94.0 352 28.7
FAN26G0545 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.8e-17 93.6 322 29.2
FAN23G1448 Fragaria x ananassa HOM05D006732 ORTHO05D005682 6.5e-17 92.8 320 30.9
RcHm_v2.0_Chr4g0406891 Rosa chinensis HOM05D006732 ORTHO05D005682 1.1e-16 92.0 321 29.0
FAN03G1911 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.5e-16 91.7 321 29.3
FvH4_1g04870 Fragaria vesca HOM05D006732 ORTHO05D005682 1.9e-16 91.3 327 29.4
FvH4_1g04892 Fragaria vesca HOM05D006732 ORTHO05D005682 3.2e-16 90.5 351 28.5
QL02p081954 Quercus lobata HOM05D006732 ORTHO05D005682 6.1e-15 86.3 191 34.0
FAN06G2841 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.4e-14 85.1 319 28.8
FAN06G4694 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.4e-14 85.1 319 28.8
FAN02G2044 Fragaria x ananassa HOM05D008398 ORTHO05D005682 2.3e-14 84.3 83 60.2
FAN28G2932 Fragaria x ananassa HOM05D006732 ORTHO05D005682 9.8e-13 79.0 220 33.2
QL02p078454 Quercus lobata HOM05D006732 ORTHO05D005682 9.8e-13 79.0 138 35.5
FvH4_7g04610 Fragaria vesca HOM05D006732 ORTHO05D005682 1.3e-12 78.6 317 27.1
FAN05G1364 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.8e-12 77.4 300 28.3
FvH4_1g03800 Fragaria vesca HOM05D006732 ORTHO05D005682 3.7e-12 77.0 325 24.9
FvH4_1g03870 Fragaria vesca HOM05D006732 ORTHO05D005682 4.8e-12 76.6 295 30.2
FAN06G2718 Fragaria x ananassa HOM05D008398 ORTHO05D005682 8.3e-12 75.9 376 26.3
FAN19G1442 Fragaria x ananassa HOM05D006732 ORTHO05D005682 8.3e-12 75.9 282 30.9
FAN03G3183 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.1e-11 75.5 358 28.2
FAN10G1871 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.1e-11 75.5 261 27.6
Prupe.2G176100 Prunus persica HOM05D006732 ORTHO05D005682 2.4e-11 74.3 184 30.4
FAN19G3146 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.1e-11 73.6 266 28.6
Prupe.6G029800 Prunus persica HOM05D006732 ORTHO05D005682 4.1e-11 73.6 168 33.9
FAN14G2290 Fragaria x ananassa HOM05D006732 ORTHO05D005682 7.0e-11 72.8 266 28.9
FAN23G0775 Fragaria x ananassa HOM05D006732 ORTHO05D005682 9.1e-11 72.4 294 28.2
RcHm_v2.0_Chr1g0323581 Rosa chinensis HOM05D012901 ORTHO05D022659 7.7e-10 69.3 198 29.8
FAN19G1560 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.7e-09 68.2 177 31.6
FvH4_1g03120 Fragaria vesca HOM05D006732 ORTHO05D005682 3.8e-09 67.0 371 26.7
Prupe.7G110000 Prunus persica HOM05D006732 ORTHO05D005682 5.0e-09 66.6 292 26.7
FAN26G1230 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.9e-08 64.7 189 29.6
FvH4_1g03650 Fragaria vesca HOM05D006732 ORTHO05D005682 3.2e-08 63.9 373 26.0
FAN19G1106 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.2e-08 63.5 376 26.1
FAN26G2548 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.5e-08 63.2 113 38.9
FvH4_1g03530 Fragaria vesca HOM05D006732 ORTHO05D005682 1.6e-07 61.6 146 32.2
FAN19G2470 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.6e-07 61.6 316 25.9
RcHm_v2.0_Chr1g0329851 Rosa chinensis HOM05D006732 ORTHO05D005682 1.6e-07 61.6 200 26.5
RcHm_v2.0_Chr5g0043771 Rosa chinensis HOM05D018501 ORTHO05D020617 2.7e-07 60.8 335 25.1
FvH4_3g44180 Fragaria vesca HOM05D031336 ORTHO05D029596 1.4e-06 58.5 374 27.5
FAN11G3653 Fragaria x ananassa HOM05D031336 ORTHO05D029596 1.4e-06 58.5 374 27.5
RcHm_v2.0_Chr5g0043731 Rosa chinensis HOM05D018501 ORTHO05D020617 8.8e-06 55.8 277 26.0


User provided reference genes

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