Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN05G0716 Fragaria x ananassa HOM05D000082 ORTHO05D000038 8.9e-87 323.6 162 100.0
FvH4_6g47060 Fragaria vesca HOM05D000082 ORTHO05D000038 4.0e-71 271.6 144 95.8
FAN09G1374 Fragaria x ananassa HOM05D000082 ORTHO05D000038 2.0e-70 269.2 144 95.1
FAN14G4812 Fragaria x ananassa HOM05D000082 ORTHO05D000038 8.1e-64 247.3 144 88.2
RcHm_v2.0_Chr2g0169511 Rosa chinensis HOM05D000082 ORTHO05D000038 2.6e-54 215.7 144 73.6
FAN09G2676 Fragaria x ananassa HOM05D000082 ORTHO05D203311 3.2e-44 182.2 111 84.7
FAN14G4678 Fragaria x ananassa HOM05D000107 ORTHO05D208455 2.5e-36 156.0 92 84.8
RcHm_v2.0_Chr2g0171591 Rosa chinensis HOM05D000082 ORTHO05D000038 8.5e-29 131.0 147 51.7
FvH4_6g50981 Fragaria vesca HOM05D000082 ORTHO05D046389 3.6e-27 125.6 156 47.4
FAN14G0462 Fragaria x ananassa HOM05D000082 ORTHO05D046389 2.3e-26 122.9 144 48.6
RcHm_v2.0_Chr2g0172771 Rosa chinensis HOM05D000082 ORTHO05D000038 1.5e-25 120.2 146 47.3
FAN02G0601 Fragaria x ananassa HOM05D000082 ORTHO05D000038 2.0e-25 119.8 114 62.3
RcHm_v2.0_Chr2g0172881 Rosa chinensis HOM05D000082 ORTHO05D000038 1.1e-23 114.0 147 45.6
RcHm_v2.0_Chr2g0172441 Rosa chinensis HOM05D000082 ORTHO05D000038 5.3e-23 111.7 155 47.1
RcHm_v2.0_Chr2g0172411 Rosa chinensis HOM05D000082 ORTHO05D000038 9.1e-23 110.9 143 49.7
FvH4_1g21860 Fragaria vesca HOM05D006854 ORTHO05D000038 4.5e-22 108.6 145 46.2
FvH4_6g50650 Fragaria vesca HOM05D000082 ORTHO05D000038 7.7e-22 107.8 145 45.5
FAN09G1957 Fragaria x ananassa HOM05D006854 ORTHO05D045506 9.4e-20 100.9 144 46.5
FvH4_5g07970 Fragaria vesca HOM05D000082 ORTHO05D000038 4.7e-19 98.6 144 45.8
FAN05G4804 Fragaria x ananassa HOM05D001101 ORTHO05D000893 4.7e-19 98.6 144 46.5
FAN08G3058 Fragaria x ananassa HOM05D000082 ORTHO05D000038 1.0e-18 97.4 144 45.1
FAN14G3657 Fragaria x ananassa HOM05D006854 ORTHO05D000038 1.0e-18 97.4 147 46.3
FvH4_6g50581 Fragaria vesca HOM05D006854 ORTHO05D045506 4.4e-17 92.0 139 43.9
RcHm_v2.0_Chr6g0246181 Rosa chinensis HOM05D014182 ORTHO05D341309 4.8e-16 88.6 128 40.6
FAN02G0518 Fragaria x ananassa HOM05D000082 ORTHO05D000038 2.4e-15 86.3 145 38.6
FvH4_6g50641 Fragaria vesca HOM05D000082 ORTHO05D000038 5.9e-14 81.6 128 41.4
FAN04G0943 Fragaria x ananassa HOM05D000082 ORTHO05D000038 3.8e-13 79.0 123 44.7
RcHm_v2.0_Chr7g0194301 Rosa chinensis HOM05D006854 ORTHO05D022664 4.2e-12 75.5 144 37.5
RcHm_v2.0_Chr7g0194201 Rosa chinensis HOM05D006854 ORTHO05D000038 1.0e-10 70.9 156 35.3
RcHm_v2.0_Chr7g0194391 Rosa chinensis HOM05D006854 ORTHO05D035501 1.7e-08 63.5 145 35.2
FvH4_5g04821 Fragaria vesca HOM05D006854 ORTHO05D022664 3.7e-08 62.4 144 34.7
RcHm_v2.0_Chr2g0171261 Rosa chinensis HOM05D000082 ORTHO05D000038 1.1e-07 60.8 137 38.0
RcHm_v2.0_Chr2g0171151 Rosa chinensis HOM05D000082 ORTHO05D000038 1.8e-07 60.1 142 34.5
RcHm_v2.0_Chr2g0171221 Rosa chinensis HOM05D000082 ORTHO05D000038 1.8e-07 60.1 142 35.9
FAN13G1691 Fragaria x ananassa HOM05D006854 ORTHO05D022664 3.1e-07 59.3 144 33.3
FAN08G3474 Fragaria x ananassa HOM05D006854 ORTHO05D022664 4.1e-07 58.9 144 33.3
FvH4_5g04830 Fragaria vesca HOM05D006854 ORTHO05D022664 7.0e-07 58.2 144 31.9
FAN02G2940 Fragaria x ananassa HOM05D000082 ORTHO05D000038 1.2e-06 57.4 86 41.9
FAN04G2532 Fragaria x ananassa HOM05D006854 ORTHO05D022664 1.6e-06 57.0 144 32.6
RcHm_v2.0_Chr2g0171341 Rosa chinensis HOM05D000082 ORTHO05D000038 1.6e-06 57.0 136 36.8
FAN13G0959 Fragaria x ananassa HOM05D006854 ORTHO05D029560 2.0e-06 56.6 54 51.9
FvH4_5g06150 Fragaria vesca HOM05D006854 ORTHO05D029383 4.5e-06 55.5 138 31.2
FAN08G1170 Fragaria x ananassa HOM05D006854 ORTHO05D029383 4.5e-06 55.5 140 30.7
FAN18G3992 Fragaria x ananassa HOM05D006854 ORTHO05D029383 4.5e-06 55.5 138 31.2
FAN09G1108 Fragaria x ananassa HOM05D031448 ORTHO05D000038 7.7e-06 54.7 60 51.7


User provided reference genes

Program Settings