Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN05G0655 Fragaria x ananassa HOM05D010652 ORTHO05D003109 4.6e-162 574.7 336 100.0
FAN05G4761 Fragaria x ananassa HOM05D010652 ORTHO05D003109 4.6e-162 574.7 336 100.0
FvH4_6g44980 Fragaria vesca HOM05D010652 ORTHO05D003109 1.5e-141 506.5 316 91.5
FAN09G1981 Fragaria x ananassa HOM05D010652 ORTHO05D003109 3.1e-134 482.3 316 88.6
FAN14G1127 Fragaria x ananassa HOM05D010652 ORTHO05D003109 7.2e-131 471.1 316 89.9
FAN02G3640 Fragaria x ananassa HOM05D002331 ORTHO05D002624 4.1e-78 295.8 259 75.7
Prupe.3G233700 Prunus persica HOM05D010652 ORTHO05D003109 3.2e-46 189.9 358 47.8
CANSAT64G2194 Cannabis sativa HOM05D010652 ORTHO05D003109 1.5e-27 127.9 326 42.3
QL08p037640 Quercus lobata HOM05D010652 ORTHO05D003109 5.5e-22 109.4 331 37.8
RcHm_v2.0_Chr2g0162231 Rosa chinensis HOM05D010652 ORTHO05D003109 8.8e-20 102.1 104 67.3
Dinv23691 Davidia involucrata HOM05D009304 ORTHO05D003109 1.0e-15 88.6 291 35.1
TAR626G0020 Trochodendron aralioides HOM05D004441 ORTHO05D003109 4.2e-14 83.2 280 36.8
Haze_13109 Corylus avellana HOM05D010652 ORTHO05D003109 2.7e-13 80.5 323 37.8
Lsat_1_v5_gn_4_70241 Lactuca sativa HOM05D009304 ORTHO05D003109 8.0e-13 79.0 328 31.7
Cfa014564 Carpinus fangiana HOM05D010652 ORTHO05D003109 1.1e-11 75.1 325 36.0
Cc05_g06660 Coffea canephora HOM05D009304 ORTHO05D003109 4.4e-11 73.2 337 34.7
Lalb_Chr19g0135401 Lupinus albus HOM05D010177 ORTHO05D003109 1.7e-10 71.2 263 36.9
Psat7g199680 Pisum sativum HOM05D010177 ORTHO05D003109 1.7e-10 71.2 299 32.8
Dinv01395 Davidia involucrata HOM05D009304 ORTHO05D003109 3.7e-10 70.1 277 34.3
arahy.Tifrunner.gnm1.ann1.7X1CID Arachis hypogaea HOM05D010177 ORTHO05D003109 6.3e-10 69.3 343 35.9
Manes.13G149800 Manihot esculenta HOM05D010652 ORTHO05D003109 8.2e-10 68.9 329 35.3
TAR629G3100 Trochodendron aralioides HOM05D004441 ORTHO05D003109 1.1e-09 68.6 332 31.6
Lj1A733T64 Lonicera japonica HOM05D009304 ORTHO05D003109 1.4e-09 68.2 328 32.0
Manes.12G087900 Manihot esculenta HOM05D010652 ORTHO05D003109 1.4e-09 68.2 322 32.6
Sabra05G0071200 Salix brachista HOM05D010652 ORTHO05D003109 1.8e-09 67.8 324 34.3
Cpa.g.sc34.119 Carica papaya HOM05D004441 ORTHO05D003109 5.3e-09 66.2 325 35.1
ClCG02G001220 Citrullus lanatus HOM05D032711 ORTHO05D003109 9.1e-09 65.5 269 33.8
Lj3g0011122 Lotus japonicus HOM05D010177 ORTHO05D003109 9.1e-09 65.5 337 30.3
Lalb_Chr14g0366711 Lupinus albus HOM05D010177 ORTHO05D003109 9.1e-09 65.5 294 30.3
Lalb_Chr22g0356441 Lupinus albus HOM05D010177 ORTHO05D003109 2.0e-08 64.3 260 35.8
Ca_20682_v3 Cicer arietinum L. HOM05D010177 ORTHO05D003109 2.6e-08 63.9 323 32.2
Phvul.006G189700 Phaseolus vulgaris HOM05D004441 ORTHO05D003109 3.5e-08 63.5 280 31.8
Glyma.15G069600 Glycine max HOM05D004441 ORTHO05D003109 7.7e-08 62.4 259 33.2
Sed0005410 Sechium edule HOM05D002331 ORTHO05D002624 7.7e-08 62.4 265 34.3
Dinv40519 Davidia involucrata HOM05D004441 ORTHO05D003109 1.3e-07 61.6 302 32.5
Eucgr.A01789 Eucalyptus grandis HOM05D004441 ORTHO05D003109 2.2e-07 60.8 340 31.2
Glyma.13G299800 Glycine max HOM05D010177 ORTHO05D003109 5.0e-07 59.7 274 34.7
Lj6g0023239 Lotus japonicus HOM05D004441 ORTHO05D003109 5.0e-07 59.7 322 31.4
CsaV3_7G004220 Cucumis sativus L. HOM05D032711 ORTHO05D003109 1.5e-06 58.2 238 32.4
Potri.007G078350 Populus trichocarpa HOM05D010652 ORTHO05D003109 2.5e-06 57.4 211 36.5
PGR042G0321 Punica granatum HOM05D004441 ORTHO05D003109 2.5e-06 57.4 293 35.2
Aqoxy1G02647 Aquilegia oxysepala HOM05D004441 ORTHO05D003109 3.2e-06 57.0 325 32.3
Nitab4.5_0003018g0090 Nicotiana tabacum HOM05D009304 ORTHO05D003109 3.2e-06 57.0 301 31.2
Glyma.13G244100 Glycine max HOM05D004441 ORTHO05D003109 5.5e-06 56.2 321 30.8
Psat5g270560 Pisum sativum HOM05D010177 ORTHO05D003109 5.5e-06 56.2 285 31.9
VMungo0540G1643 Vigna mungo HOM05D004441 ORTHO05D003109 5.5e-06 56.2 323 30.7
Glyma.12G108500 Glycine max HOM05D010177 ORTHO05D003109 7.2e-06 55.8 269 37.9


User provided reference genes

Program Settings