Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN05G0591 Fragaria x ananassa HOM05D007950 ORTHO05D009951 3.8e-35 151.0 77 100.0
FAN14G2438 Fragaria x ananassa HOM05D007950 ORTHO05D009951 1.6e-30 135.6 76 93.4
Prupe.3G070100 Prunus persica HOM05D007950 ORTHO05D009951 5.1e-16 87.4 72 66.7
Thecc.06G089600 Theobroma cacao HOM05D007950 ORTHO05D009951 1.4e-13 79.3 69 62.3
Lj3g0016273 Lotus japonicus HOM05D007950 ORTHO05D009951 6.9e-13 77.0 68 58.8
FvH4_1g04841 Fragaria vesca HOM05D007950 ORTHO05D009951 1.2e-12 76.3 71 57.7
FAN19G2230 Fragaria x ananassa HOM05D007950 ORTHO05D009951 1.2e-12 76.3 71 57.7
FAN26G3407 Fragaria x ananassa HOM05D007950 ORTHO05D009951 3.4e-12 74.7 71 56.3
Gohir.D03G063400 Gossypium hirsutum HOM05D007950 ORTHO05D009951 1.3e-11 72.8 71 56.3
Gorai.002G059800 Gossypium raimondii HOM05D007950 ORTHO05D009951 1.3e-11 72.8 71 56.3
QL05p023317 Quercus lobata HOM05D007950 ORTHO05D009951 1.3e-11 72.8 67 53.7
TAR636G2963 Trochodendron aralioides HOM05D007950 ORTHO05D009951 1.3e-11 72.8 69 55.1
CiPaw.02G150700 Carya illinoinensis HOM05D007950 ORTHO05D009951 1.7e-11 72.4 65 58.5
Medtr4g012610 Medicago truncatula HOM05D007950 ORTHO05D009951 1.7e-11 72.4 72 52.8
CSS0032282 Camellia sinensis var. sinensis HOM05D007950 ORTHO05D009951 2.2e-11 72.0 72 55.6
Ciclev10010772m.g Citrus clementina HOM05D007950 ORTHO05D009951 3.8e-11 71.2 71 52.1
Nn8g39199 Nelumbo nucifera HOM05D007950 ORTHO05D009951 3.8e-11 71.2 71 53.5
TPR.G24171 Trifolium pratense HOM05D007950 ORTHO05D009951 3.8e-11 71.2 68 54.4
GSVIVG01015395001 Vitis vinifera HOM05D007950 ORTHO05D009951 3.8e-11 71.2 71 53.5
Eucgr.C01044 Eucalyptus grandis HOM05D007950 ORTHO05D009951 5.0e-11 70.9 71 53.5
Eucgr.J02984 Eucalyptus grandis HOM05D007950 ORTHO05D009951 5.0e-11 70.9 62 58.1
FAN23G0617 Fragaria x ananassa HOM05D007950 ORTHO05D009951 5.0e-11 70.9 71 54.9
Gohir.1Z049586 Gossypium hirsutum HOM05D007950 ORTHO05D009951 5.0e-11 70.9 71 54.9
Gohir.A05G130600 Gossypium hirsutum HOM05D007950 ORTHO05D009951 5.0e-11 70.9 66 59.1
Prupe.7G230500 Prunus persica HOM05D007950 ORTHO05D009951 5.0e-11 70.9 64 56.2
Psat7g251240 Pisum sativum HOM05D007950 ORTHO05D009951 8.5e-11 70.1 72 51.4
Gohir.D05G129500 Gossypium hirsutum HOM05D007950 ORTHO05D009951 1.4e-10 69.3 66 57.6
Nn2g11757 Nelumbo nucifera HOM05D007950 ORTHO05D009951 1.4e-10 69.3 63 55.6
CiPaw.04G164400 Carya illinoinensis HOM05D007950 ORTHO05D009951 1.9e-10 68.9 64 56.2
RcHm_v2.0_Chr2g0090511 Rosa chinensis HOM05D007950 ORTHO05D009951 2.5e-10 68.6 71 50.7
Actinidia20354 Actinidia chinensis HOM05D007950 ORTHO05D009951 3.2e-10 68.2 69 50.7
Thecc.09G111000 Theobroma cacao HOM05D007950 ORTHO05D009951 3.2e-10 68.2 71 50.7
CSS0048253 Camellia sinensis var. sinensis HOM05D007950 ORTHO05D009951 4.2e-10 67.8 64 56.2
MD02G1047700 Malus domestica HOM05D007950 ORTHO05D009951 4.2e-10 67.8 71 50.7
Medtr4g012580 Medicago truncatula HOM05D007950 ORTHO05D009951 5.5e-10 67.4 68 50.0
Potri.001G181701 Populus trichocarpa HOM05D007950 ORTHO05D009951 5.5e-10 67.4 65 50.8
CSS0015996 Camellia sinensis var. sinensis HOM05D007950 ORTHO05D009951 7.2e-10 67.0 70 48.6
MD15G1186200 Malus domestica HOM05D007950 ORTHO05D009951 7.2e-10 67.0 71 49.3
Manes.16G116501 Manihot esculenta HOM05D007950 ORTHO05D009951 7.2e-10 67.0 71 47.9
Sc10g0007380 Simmondsia chinensis HOM05D007950 ORTHO05D009951 7.2e-10 67.0 66 53.0
vmacro20696 Vaccinium macrocarpon HOM05D007950 ORTHO05D009951 7.2e-10 67.0 71 46.5
SalBow2G2396 Salvia bowleyana HOM05D007950 ORTHO05D009951 9.4e-10 66.6 56 60.7
Manes.11G045700 Manihot esculenta HOM05D007950 ORTHO05D009951 1.2e-09 66.2 71 50.7
QL02p085472 Quercus lobata HOM05D007950 ORTHO05D009951 1.6e-09 65.9 70 47.1
PGR102G0372 Punica granatum HOM05D007950 ORTHO05D009951 4.6e-09 64.3 68 51.5
CsaV3_1G030490 Cucumis sativus L. HOM05D007950 ORTHO05D009951 6.1e-09 63.9 70 42.9
ClCG06G008510 Citrullus lanatus HOM05D007950 ORTHO05D009951 7.9e-09 63.5 74 41.9
Phvul.010G150100 Phaseolus vulgaris HOM05D007950 ORTHO05D009951 7.9e-09 63.5 72 48.6
Cc04_g03310 Coffea canephora HOM05D007950 ORTHO05D009951 1.0e-08 63.2 71 50.7
CiPaw.03G232500 Carya illinoinensis HOM05D007950 ORTHO05D009951 1.8e-08 62.4 69 46.4
Lalb_Chr04g0262731 Lupinus albus HOM05D007950 ORTHO05D009951 1.8e-08 62.4 72 47.2
arahy.Tifrunner.gnm1.ann1.6Z76EK Arachis hypogaea HOM05D007950 ORTHO05D009951 2.3e-08 62.0 74 45.9
CDE06G0019 Ceratophyllum demersum HOM05D007950 ORTHO05D009951 2.3e-08 62.0 69 49.3
Glyma.08G206200 Glycine max HOM05D007950 ORTHO05D009951 2.3e-08 62.0 68 48.5
Gohir.D06G060600 Gossypium hirsutum HOM05D007950 ORTHO05D009951 5.1e-08 60.8 69 47.8
Haze_16407 Corylus avellana HOM05D007950 ORTHO05D009951 6.7e-08 60.5 68 48.5
Haze_16408 Corylus avellana HOM05D007950 ORTHO05D009951 6.7e-08 60.5 68 48.5
Gohir.A06G062300 Gossypium hirsutum HOM05D007950 ORTHO05D009951 6.7e-08 60.5 69 46.4
ATR0980G014 Amborella trichopoda HOM05D007950 ORTHO05D009951 8.8e-08 60.1 74 45.9
Migut.D01581 Erythranthe guttata HOM05D007950 ORTHO05D009951 8.8e-08 60.1 68 45.6
Gorai.010G070600 Gossypium raimondii HOM05D007950 ORTHO05D009951 2.0e-07 58.9 69 46.4
Potri.003G054001 Populus trichocarpa HOM05D007950 ORTHO05D009951 2.0e-07 58.9 64 50.0
Glyma.07G005901 Glycine max HOM05D000325 ORTHO05D002025 2.6e-07 58.5 67 47.8
Cc06_g09630 Coffea canephora HOM05D007950 ORTHO05D009951 4.4e-07 57.8 64 53.1
Psat1g042280 Pisum sativum HOM05D007950 ORTHO05D009951 4.4e-07 57.8 71 43.7
arahy.Tifrunner.gnm1.ann1.7G47EE Arachis hypogaea HOM05D007950 ORTHO05D009951 9.7e-07 56.6 72 41.7
arahy.Tifrunner.gnm1.ann1.U6R6BR Arachis hypogaea HOM05D007950 ORTHO05D009951 9.7e-07 56.6 72 41.7
HanXRQChr09g0275201 Helianthus annuus HOM05D007950 ORTHO05D009951 2.8e-06 55.1 70 42.9
Phvul.003G020900 Phaseolus vulgaris HOM05D007950 ORTHO05D009951 2.8e-06 55.1 71 42.3
TPR.G8534 Trifolium pratense HOM05D007950 ORTHO05D009951 2.8e-06 55.1 68 45.6
TPR.G35274 Trifolium pratense HOM05D007950 ORTHO05D009951 6.3e-06 53.9 71 39.4


User provided reference genes

Program Settings