Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN05G0385 Fragaria x ananassa HOM05D005892 ORTHO05D007364 3.7e-155 551.6 300 100.0
FAN05G3684 Fragaria x ananassa HOM05D005892 ORTHO05D007364 4.4e-148 528.1 301 96.3
FvH4_6g20290 Fragaria vesca HOM05D005892 ORTHO05D007364 8.4e-147 523.9 300 96.3
FAN05G1366 Fragaria x ananassa HOM05D005892 ORTHO05D007364 8.4e-147 523.9 300 96.3
FAN05G3301 Fragaria x ananassa HOM05D005892 ORTHO05D007364 8.4e-147 523.9 300 96.3
FAN14G3222 Fragaria x ananassa HOM05D005892 ORTHO05D007364 8.4e-147 523.9 300 96.3
FAN09G4751 Fragaria x ananassa HOM05D005892 ORTHO05D007364 1.1e-146 523.5 300 96.3
RcHm_v2.0_Chr3g0475881 Rosa chinensis HOM05D005892 ORTHO05D007364 1.2e-140 503.4 300 91.3
Prupe.7G094800 Prunus persica HOM05D005892 ORTHO05D007364 9.0e-125 450.7 284 82.4
Haze_20187 Corylus avellana HOM05D005892 ORTHO05D007364 6.2e-118 427.9 281 78.6
Cfa020027 Carpinus fangiana HOM05D005892 ORTHO05D007364 1.8e-117 426.4 281 78.6
CiPaw.10G017200 Carya illinoinensis HOM05D005892 ORTHO05D007364 2.4e-117 426.0 281 78.3
Ciclev10011749m.g Citrus clementina HOM05D005892 ORTHO05D007364 3.1e-117 425.6 282 77.7
Atru.chr8.1369 Acer truncatum HOM05D005892 ORTHO05D007364 2.0e-116 422.9 287 76.7
MD14G1038600 Malus domestica HOM05D005892 ORTHO05D007364 4.5e-116 421.8 282 78.7
Manes.08G033200 Manihot esculenta HOM05D005892 ORTHO05D007364 1.4e-114 416.8 283 75.6
Potri.016G070700 Populus trichocarpa HOM05D005892 ORTHO05D007364 1.4e-114 416.8 281 75.8
Sabra16G0073000 Salix brachista HOM05D005892 ORTHO05D007364 1.2e-113 413.7 283 74.6
Sabra16G0070800 Salix brachista HOM05D005892 ORTHO05D007364 2.7e-113 412.5 282 74.8
GSVIVG01029940001 Vitis vinifera HOM05D005892 ORTHO05D007364 7.9e-113 411.0 284 74.6
Cpa.g.sc35.59 Carica papaya HOM05D005892 ORTHO05D007364 8.7e-112 407.5 284 76.4
Thecc.05G104100 Theobroma cacao HOM05D005892 ORTHO05D007364 2.5e-111 406.0 281 76.2
COL.COLO4_29579 Corchorus olitorius HOM05D005892 ORTHO05D007364 5.7e-111 404.8 280 76.4
Duzib093G2092 Durio zibethinus HOM05D005892 ORTHO05D007364 9.6e-111 404.1 278 75.9
Gohir.A01G201600 Gossypium hirsutum HOM05D005892 ORTHO05D007364 2.1e-110 402.9 278 74.5
Gorai.002G235400 Gossypium raimondii HOM05D005892 ORTHO05D007364 4.8e-110 401.7 278 74.5
Rhsim09G0086500 Rhododendron simsii HOM05D005892 ORTHO05D007364 4.8e-110 401.7 282 73.8
CSS0032108 Camellia sinensis var. sinensis HOM05D005892 ORTHO05D007364 3.1e-109 399.1 282 73.0
Gohir.D01G191500 Gossypium hirsutum HOM05D005892 ORTHO05D007364 1.2e-108 397.1 278 73.7
Lj3A860G48 Lonicera japonica HOM05D005892 ORTHO05D007364 4.5e-108 395.2 284 74.6
Hma1.2p1_1525F.1_g288970 Hydrangea macrophylla HOM05D005892 ORTHO05D007364 2.2e-107 392.9 282 74.8
PGR142G3547 Punica granatum HOM05D005892 ORTHO05D007364 1.4e-106 390.2 283 72.4
Eucgr.K02619 Eucalyptus grandis HOM05D005892 ORTHO05D007364 6.1e-105 384.8 287 70.4
Actinidia12433 Actinidia chinensis HOM05D005892 ORTHO05D007364 7.9e-105 384.4 283 72.4
QL07p036776 Quercus lobata HOM05D005892 ORTHO05D007364 2.3e-104 382.9 337 62.9
TAR633G0738 Trochodendron aralioides HOM05D005892 ORTHO05D007364 3.9e-104 382.1 283 70.0
TAR633G2239 Trochodendron aralioides HOM05D005892 ORTHO05D007364 3.9e-104 382.1 282 70.6
Nn2g14624 Nelumbo nucifera HOM05D005892 ORTHO05D007364 6.7e-104 381.3 285 68.4
Nitab4.5_0005476g0010 Nicotiana tabacum HOM05D005892 ORTHO05D007364 1.8e-101 373.2 281 70.1
Peaxi162Scf01139g00002 Petunia axillaris HOM05D005892 ORTHO05D007364 3.1e-101 372.5 281 70.5
Nitab4.5_0007165g0010 Nicotiana tabacum HOM05D005892 ORTHO05D007364 4.1e-101 372.1 281 69.8
THA.LOC104816617 Tarenaya hassleriana HOM05D005892 ORTHO05D007364 4.1e-101 372.1 281 70.8
ClCG10G018360 Citrullus lanatus HOM05D005892 ORTHO05D007364 4.5e-100 368.6 283 68.6
Glyma.03G201900 Glycine max HOM05D005892 ORTHO05D007364 5.9e-100 368.2 281 68.3
MBI19_g09306_MAGBIO Magnolia biondii HOM05D005892 ORTHO05D007364 5.9e-100 368.2 291 68.4
VMungo1383G1945 Vigna mungo HOM05D005892 ORTHO05D007364 1.3e-99 367.1 277 69.3
Sed0021278 Sechium edule HOM05D005892 ORTHO05D007364 1.7e-99 366.7 279 69.9
Glyma.19G026300 Glycine max HOM05D005892 ORTHO05D007364 2.2e-99 366.3 277 69.3
CsaV3_3G037930 Cucumis sativus L. HOM05D005892 ORTHO05D007364 3.8e-99 365.5 279 68.5
Phvul.001G195400 Phaseolus vulgaris HOM05D005892 ORTHO05D007364 3.8e-99 365.5 277 69.7
Lalb_Chr20g0111381 Lupinus albus HOM05D005892 ORTHO05D007364 1.1e-98 364.0 276 67.8
Ca_25808_v3 Cicer arietinum L. HOM05D005892 ORTHO05D007364 3.2e-98 362.5 278 68.0
PSO339G5192 Papaver somniferum HOM05D005892 ORTHO05D007364 7.2e-98 361.3 281 68.3
DCAR_026818 Daucus carota HOM05D005892 ORTHO05D007364 9.4e-98 360.9 281 67.3
Lj1g0008745 Lotus japonicus HOM05D005892 ORTHO05D007364 9.4e-98 360.9 283 67.5
Cc11_g05910 Coffea canephora HOM05D005892 ORTHO05D007364 2.1e-97 359.8 281 70.1
CARHR083520 Cardamine hirsuta HOM05D005892 ORTHO05D007364 3.6e-97 359.0 281 70.5
arahy.Tifrunner.gnm1.ann1.EHSJ8W Arachis hypogaea HOM05D005892 ORTHO05D007364 1.0e-96 357.5 276 68.1
arahy.Tifrunner.gnm1.ann1.PAXQ04 Arachis hypogaea HOM05D005892 ORTHO05D007364 1.0e-96 357.5 276 68.1
PGSC0003DMG400006864 Solanum tuberosum HOM05D005892 ORTHO05D007364 1.8e-96 356.7 281 68.3
PSO384G1009 Papaver somniferum HOM05D005892 ORTHO05D007364 2.3e-96 356.3 281 67.3
Aa31LG3G1670 Aethionema arabicum HOM05D005892 ORTHO05D007364 3.0e-96 355.9 283 68.9
Medtr7g106200 Medicago truncatula HOM05D005892 ORTHO05D007364 3.0e-96 355.9 280 66.4
Carub.0003s0830 Capsella rubella HOM05D005892 ORTHO05D007364 6.7e-96 354.8 281 69.8
Sc07g0007600 Simmondsia chinensis HOM05D005892 ORTHO05D007364 2.0e-95 353.2 284 65.8
Sopen01g034280 Solanum pennellii HOM05D005892 ORTHO05D007364 2.5e-95 352.8 281 67.6
AUR62036522 Chenopodium quinoa HOM05D005892 ORTHO05D007364 5.7e-95 351.7 282 67.0
BolC5t34536H Brassica oleracea HOM05D005892 ORTHO05D007364 7.4e-95 351.3 279 70.3
BraA05t22764Z Brassica rapa HOM05D005892 ORTHO05D007364 7.4e-95 351.3 279 70.3
C05p58840 Brassica napus HOM05D005892 ORTHO05D007364 9.7e-95 350.9 279 70.3
A05p39800 Brassica napus HOM05D005892 ORTHO05D007364 2.2e-94 349.7 279 70.3
Hund10710 Selenicereus undatus HOM05D005892 ORTHO05D007364 2.2e-94 349.7 281 66.9
AL3G20290 Arabidopsis lyrata HOM05D005892 ORTHO05D007364 3.7e-94 349.0 281 68.0
Thhalv10020833m.g Eutrema salsugineum HOM05D005892 ORTHO05D007364 4.8e-94 348.6 278 69.1
Solyc01g087230.3 Solanum lycopersicum HOM05D005892 ORTHO05D007364 6.3e-94 348.2 281 66.9
AT3G09180 Arabidopsis thaliana HOM05D005892 ORTHO05D007364 1.8e-93 346.7 281 67.6
EL10Ac9g21147 Beta vulgaris HOM05D005892 ORTHO05D007364 1.8e-93 346.7 279 67.0
MELO3C009537.2 Cucumis melo HOM05D005892 ORTHO05D007364 3.1e-93 345.9 325 59.1
Sp3g07480 Schrenkiella parvula HOM05D005892 ORTHO05D007364 2.0e-92 343.2 278 68.3
ECA234G1824 Erigeron canadensis HOM05D005892 ORTHO05D007364 2.6e-92 342.8 276 65.6
MSTRG.13644 Avicennia marina HOM05D005892 ORTHO05D007364 4.5e-92 342.0 281 68.7
Psat3g029200 Pisum sativum HOM05D005892 ORTHO05D007364 7.7e-92 341.3 281 62.6
AUR62042262 Chenopodium quinoa HOM05D005892 ORTHO05D007364 1.7e-91 340.1 271 67.5
BraA03t12793Z Brassica rapa HOM05D005892 ORTHO05D007364 3.8e-91 339.0 282 67.4
HanXRQChr16g0527301 Helianthus annuus HOM05D005892 ORTHO05D007364 3.8e-91 339.0 282 66.3
C03p43860 Brassica napus HOM05D005892 ORTHO05D007364 1.4e-90 337.0 281 67.6
CDE02G2672 Ceratophyllum demersum HOM05D005892 ORTHO05D007364 1.9e-90 336.7 284 63.7
BcaC01g06891 Brassica carinata HOM05D005892 ORTHO05D007364 5.5e-90 335.1 281 67.3
BolC3t16654H Brassica oleracea HOM05D005892 ORTHO05D007364 5.5e-90 335.1 281 67.3
SalBow2G2452 Salvia bowleyana HOM05D005892 ORTHO05D007364 5.5e-90 335.1 284 67.3
Migut.E00525 Erythranthe guttata HOM05D005892 ORTHO05D007364 7.2e-90 334.7 280 67.9
Lsat_1_v5_gn_4_22820 Lactuca sativa HOM05D005892 ORTHO05D007364 3.6e-89 332.4 286 64.7
SGA_v2.0_scaffold65G22109 Striga asiatica HOM05D005892 ORTHO05D007364 1.4e-88 330.5 289 65.4
Ah.10g030320 Amaranthus hybridus HOM05D005892 ORTHO05D007364 2.3e-88 329.7 287 63.8
Aqoxy1G00010 Aquilegia oxysepala HOM05D005892 ORTHO05D007364 8.8e-88 327.8 310 59.0
A03p36220 Brassica napus HOM05D005892 ORTHO05D007364 1.3e-86 323.9 282 66.0
Os01g0263500 Oryza sativa ssp. japonica HOM05D005892 ORTHO05D007364 1.3e-86 323.9 285 64.2
Zm00001eb156320 Zea mays HOM05D005892 ORTHO05D007364 4.1e-85 318.9 287 64.1
TPR.G14083 Trifolium pratense HOM05D005892 ORTHO05D007364 2.6e-84 316.2 292 59.2
HPP92_001371 Vanilla planifolia HOM05D005892 ORTHO05D007364 5.9e-84 315.1 290 59.7
HPP92_001347 Vanilla planifolia HOM05D005892 ORTHO05D007364 1.3e-83 313.9 290 59.3
CAN.G219.4 Capsicum annuum HOM05D005892 ORTHO05D007364 4.2e-82 308.9 240 69.2
ATR0068G118 Amborella trichopoda HOM05D005892 ORTHO05D007364 2.0e-79 300.1 323 55.4
unitig_52.g17290 Utricularia gibba HOM05D005892 ORTHO05D007364 5.7e-79 298.5 280 59.6
HPP92_001441 Vanilla planifolia HOM05D005892 ORTHO05D007364 2.0e-76 290.0 290 56.2
FAN02G1987 Fragaria x ananassa HOM05D005892 ORTHO05D007364 2.7e-76 289.7 264 63.6
CDE04G0639 Ceratophyllum demersum HOM05D005892 ORTHO05D007364 1.3e-75 287.3 274 58.8
Hma1.2p1_1525F.1_g288980 Hydrangea macrophylla HOM05D005892 ORTHO05D007364 4.2e-74 282.3 212 72.2
BcaB04g18552 Brassica carinata HOM05D005892 ORTHO05D007364 3.7e-70 269.2 208 67.3
RcHm_v2.0_Chr1g0331111 Rosa chinensis HOM05D005892 ORTHO05D007364 1.6e-65 253.8 148 95.9
Zm00001eb348930 Zea mays HOM05D005892 ORTHO05D007364 1.3e-62 244.2 215 63.7
Nn2g14691 Nelumbo nucifera HOM05D005892 ORTHO05D007364 2.3e-56 223.4 127 86.6
Atru.chr9.699 Acer truncatum HOM05D005892 ORTHO05D007364 3.3e-50 203.0 124 81.5
Pp3c15_4850 Physcomitrium patens HOM05D005892 ORTHO05D007364 4.7e-41 172.6 306 40.2
Mapoly0090s0009 Marchantia polymorpha HOM05D005892 ORTHO05D007364 9.2e-37 158.3 295 38.0
RcHm_v2.0_Chr1g0331121 Rosa chinensis HOM05D005892 ORTHO05D007364 1.6e-36 157.5 96 87.5
Peaxi162Scf00684g00585 Petunia axillaris HOM05D005892 ORTHO05D007364 8.9e-32 141.7 187 47.6
BcaC05g29638 Brassica carinata HOM05D005892 ORTHO05D007364 2.1e-28 130.6 88 75.0
Atru.chr9.700 Acer truncatum HOM05D005892 ORTHO05D007364 1.2e-25 121.3 105 64.8
AagrBONN_evm.TU.Sc2ySwM_228.2745 Anthoceros agrestis HOM05D005892 ORTHO05D007364 1.2e-25 121.3 295 31.5
Hma1.2p1_1525F.1_g288960 Hydrangea macrophylla HOM05D005892 ORTHO05D007364 2.8e-25 120.2 93 67.7
CSS0000115 Camellia sinensis var. sinensis HOM05D005892 ORTHO05D007364 1.2e-23 114.8 81 72.8
Aa31sc80G50 Aethionema arabicum HOM05D005892 ORTHO05D007364 1.3e-22 111.3 92 65.2
HPP92_019993 Vanilla planifolia HOM05D002096 ORTHO05D002203 3.2e-21 106.7 151 43.0
SEGI_07863 Sequoiadendron giganteum HOM05D005892 ORTHO05D007364 1.3e-09 68.2 87 41.4


User provided reference genes

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