Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN05G0250 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.3e-224 782.7 382 100.0
FAN02G2469 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.5e-132 476.9 557 53.1
FAN09G2575 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.6e-126 455.7 437 61.1
FvH4_6g36920 Fragaria vesca HOM05D006368 ORTHO05D006739 4.4e-108 395.6 408 59.8
FAN14G3548 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.6e-78 296.2 382 50.3
RcHm_v2.0_Chr4g0430971 Rosa chinensis HOM05D006368 ORTHO05D006739 1.4e-29 134.8 451 29.7
RcHm_v2.0_Chr5g0067081 Rosa chinensis HOM05D006368 ORTHO05D006739 1.0e-27 128.6 452 29.6
FvH4_6g49640 Fragaria vesca HOM05D006368 ORTHO05D006739 4.2e-26 123.2 448 32.6
FAN14G2460 Fragaria x ananassa HOM05D006368 ORTHO05D006739 5.5e-26 122.9 448 32.4
Prupe.3G239100 Prunus persica HOM05D006368 ORTHO05D006739 1.0e-24 118.6 456 29.8
FvH4_6g47001 Fragaria vesca HOM05D006368 ORTHO05D006739 4.3e-23 113.2 450 30.7
FAN02G0212 Fragaria x ananassa HOM05D006368 ORTHO05D006739 4.3e-23 113.2 462 30.7
FAN02G0373 Fragaria x ananassa HOM05D006368 ORTHO05D006739 7.4e-23 112.5 438 29.7
FvH4_6g47002 Fragaria vesca HOM05D006368 ORTHO05D006739 9.6e-23 112.1 443 31.2
FAN14G0640 Fragaria x ananassa HOM05D006368 ORTHO05D006739 9.6e-23 112.1 443 31.2
FvH4_6g49120 Fragaria vesca HOM05D006368 ORTHO05D006739 6.3e-22 109.4 417 30.5
FAN05G1932 Fragaria x ananassa HOM05D006368 ORTHO05D006739 8.2e-22 109.0 406 29.6
MD09G1027500 Malus domestica HOM05D006368 ORTHO05D006739 8.2e-22 109.0 471 27.4
FAN09G3687 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.1e-21 108.6 418 31.1
FAN14G2751 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.2e-20 105.1 389 31.4
FAN12G2895 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.5e-20 104.8 464 29.1
RcHm_v2.0_Chr2g0153831 Rosa chinensis HOM05D006368 ORTHO05D006739 4.5e-20 103.2 418 28.7
FAN14G0584 Fragaria x ananassa HOM05D006368 ORTHO05D006739 7.6e-20 102.4 365 32.6
FAN14G2798 Fragaria x ananassa HOM05D006368 ORTHO05D006739 7.6e-20 102.4 365 32.6
Prupe.3G291200 Prunus persica HOM05D006368 ORTHO05D006739 2.2e-19 100.9 428 28.7
FvH4_6g49281 Fragaria vesca HOM05D006368 ORTHO05D006739 6.5e-19 99.4 414 29.2
FAN05G4829 Fragaria x ananassa HOM05D006368 ORTHO05D006739 5.5e-18 96.3 399 29.1
RcHm_v2.0_Chr2g0166171 Rosa chinensis HOM05D006368 ORTHO05D006739 9.3e-18 95.5 407 29.5
FvH4_3g37301 Fragaria vesca HOM05D006368 ORTHO05D006739 1.6e-17 94.7 106 45.3
FAN02G3903 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.8e-16 91.3 429 27.7
FvH4_6g37591 Fragaria vesca HOM05D006368 ORTHO05D006739 2.3e-16 90.9 424 28.3
FAN15G0762 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.0e-16 90.5 201 34.3
FvH4_6g37552 Fragaria vesca HOM05D006368 ORTHO05D006739 3.9e-16 90.1 401 29.9
FAN02G0769 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.5e-15 87.4 392 27.8
FAN16G0274 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.3e-15 87.0 109 45.9
FvH4_3g30930 Fragaria vesca HOM05D006368 ORTHO05D006739 5.7e-15 86.3 240 32.9
FvH4_4g23711 Fragaria vesca HOM05D006368 ORTHO05D006739 1.1e-13 82.0 96 50.0
FAN20G1708 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.8e-13 81.3 246 34.6
FAN09G4055 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.4e-13 80.9 414 25.6
FvH4_3g37281 Fragaria vesca HOM05D006368 ORTHO05D006739 6.9e-13 79.3 86 48.8
MD09G1050100 Malus domestica HOM05D006368 ORTHO05D006739 6.9e-13 79.3 237 30.0
FvH4_6g47170 Fragaria vesca HOM05D006368 ORTHO05D006739 9.0e-13 79.0 399 27.8
FAN09G0854 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.2e-12 78.6 241 31.1
MD03G1085600 Malus domestica HOM05D006368 ORTHO05D006739 1.5e-12 78.2 379 28.0
RcHm_v2.0_Chr2g0166201 Rosa chinensis HOM05D006368 ORTHO05D006739 5.9e-12 76.3 435 25.1
FAN24G2342 Fragaria x ananassa HOM05D006368 ORTHO05D006739 7.7e-12 75.9 244 33.2
FAN18G3544 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.0e-11 75.5 378 27.0
FAN05G3822 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.2e-11 74.3 368 25.8
FAN09G3776 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.9e-11 73.9 188 35.1
FAN08G0813 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.8e-11 73.6 378 27.0
Dinv25349 Davidia involucrata HOM05D006368 ORTHO05D006739 6.5e-11 72.8 116 42.2
TAR636G0219 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.1e-10 72.0 387 27.4
FAN10G0746 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.4e-10 71.6 396 26.3
RcHm_v2.0_Chr7g0197821 Rosa chinensis HOM05D006368 ORTHO05D006739 1.9e-10 71.2 362 29.8
TWI09G1230 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 1.9e-10 71.2 406 24.6
FvH4_5g02330 Fragaria vesca HOM05D006368 ORTHO05D006739 3.2e-10 70.5 372 26.1
FAN14G3911 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.2e-10 70.5 396 26.0
FvH4_3g37300 Fragaria vesca HOM05D006368 ORTHO05D006739 5.5e-10 69.7 110 39.1
FAN13G2475 Fragaria x ananassa HOM05D006368 ORTHO05D006739 5.5e-10 69.7 382 26.7
FAN14G4512 Fragaria x ananassa HOM05D006368 ORTHO05D006739 7.2e-10 69.3 186 34.9
FAN28G1502 Fragaria x ananassa HOM05D006368 ORTHO05D006739 9.4e-10 68.9 110 40.9
TAR636G2580 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.2e-09 68.6 378 27.2
FAN02G1276 Fragaria x ananassa HOM05D005035 ORTHO05D006141 1.6e-09 68.2 368 28.8
FvH4_6g47140 Fragaria vesca HOM05D006368 ORTHO05D006739 3.6e-09 67.0 430 25.8
FAN02G2985 Fragaria x ananassa HOM05D002060 ORTHO05D002098 3.6e-09 67.0 393 26.5
Prupe.1G019300 Prunus persica HOM05D006368 ORTHO05D006739 3.6e-09 67.0 85 43.5
FAN15G3238 Fragaria x ananassa HOM05D006368 ORTHO05D006739 4.6e-09 66.6 237 29.1
FAN17G2014 Fragaria x ananassa HOM05D006368 ORTHO05D006739 4.6e-09 66.6 71 52.1
Lj2g0002702 Lotus japonicus HOM05D006368 ORTHO05D006739 4.6e-09 66.6 411 24.8
Prupe.1G004300 Prunus persica HOM05D006368 ORTHO05D006739 7.9e-09 65.9 58 53.4
TAR636G2770 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.0e-08 65.5 402 24.6
FAN14G0026 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.4e-08 65.1 109 41.3
FAN14G5568 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.4e-08 65.1 430 25.6
PSO170G4594 Papaver somniferum HOM05D000151 ORTHO05D000074 1.4e-08 65.1 406 22.7
TAR636G0604 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.8e-08 64.7 413 24.5
FvH4_6g39721 Fragaria vesca HOM05D006368 ORTHO05D006739 2.3e-08 64.3 215 31.6
FAN24G0202 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.3e-08 64.3 107 38.3
Prupe.1G016300 Prunus persica HOM05D006368 ORTHO05D006739 2.3e-08 64.3 298 28.2
FvH4_2g28870 Fragaria vesca HOM05D006368 ORTHO05D006739 3.0e-08 63.9 190 33.7
Manes.07G051600 Manihot esculenta HOM05D000151 ORTHO05D000074 3.0e-08 63.9 436 23.4
FAN04G2785 Fragaria x ananassa HOM05D006368 ORTHO05D006739 5.1e-08 63.2 356 26.7
Lj1P828T11 Lonicera japonica HOM05D000151 ORTHO05D000074 5.1e-08 63.2 139 36.0
TPR.G25164 Trifolium pratense HOM05D010147 ORTHO05D006739 5.1e-08 63.2 365 23.6
FAN14G2825 Fragaria x ananassa HOM05D006368 ORTHO05D006739 6.7e-08 62.8 74 43.2
FvH4_6g49280 Fragaria vesca HOM05D006368 ORTHO05D006739 8.8e-08 62.4 342 27.8
TAR636G1120 Trochodendron aralioides HOM05D000151 ORTHO05D000074 8.8e-08 62.4 410 26.6
FAN25G0324 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.1e-07 62.0 94 42.6
FAN14G0813 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.0e-07 61.2 350 25.7
Lj2C486T14 Lonicera japonica HOM05D000151 ORTHO05D000074 2.0e-07 61.2 152 32.2
Lj2g0009806 Lotus japonicus HOM05D006368 ORTHO05D006739 2.0e-07 61.2 389 24.7
FAN05G1788 Fragaria x ananassa HOM05D006368 ORTHO05D025547 4.3e-07 60.1 195 33.8
FAN14G1402 Fragaria x ananassa HOM05D006368 ORTHO05D006739 5.7e-07 59.7 385 25.7
TAR636G1638 Trochodendron aralioides HOM05D000151 ORTHO05D000074 5.7e-07 59.7 421 24.2
FAN02G0248 Fragaria x ananassa HOM05D006368 ORTHO05D025547 7.4e-07 59.3 195 33.8
FAN14G1492 Fragaria x ananassa HOM05D006368 ORTHO05D006739 9.7e-07 58.9 399 26.8
FvH4_6g47161 Fragaria vesca HOM05D006368 ORTHO05D035370 1.7e-06 58.2 58 48.3
FAN02G1786 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.8e-06 57.4 107 40.2
FAN05G0916 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.8e-06 57.4 99 42.4
Gohir.A02G175500 Gossypium hirsutum HOM05D000151 ORTHO05D000074 2.8e-06 57.4 113 33.6
Medtr7g069820 Medicago truncatula HOM05D010147 ORTHO05D006739 2.8e-06 57.4 379 23.2
TAR626G0819 Trochodendron aralioides HOM05D000151 ORTHO05D000074 2.8e-06 57.4 100 39.0
FvH4_6g47130 Fragaria vesca HOM05D006368 ORTHO05D006739 3.7e-06 57.0 399 26.8
Gohir.D03G004300 Gossypium hirsutum HOM05D000151 ORTHO05D000074 3.7e-06 57.0 113 33.6
Cc11_g10930 Coffea canephora HOM05D000151 ORTHO05D000074 4.8e-06 56.6 401 21.7
FvH4_6g46020 Fragaria vesca HOM05D006368 ORTHO05D025547 4.8e-06 56.6 194 33.5
FAN14G1520 Fragaria x ananassa HOM05D006368 ORTHO05D025547 4.8e-06 56.6 194 33.5
FAN14G5490 Fragaria x ananassa HOM05D006368 ORTHO05D025547 4.8e-06 56.6 194 33.5
Lalb_Chr19g0133241 Lupinus albus HOM05D006368 ORTHO05D006739 4.8e-06 56.6 424 22.6
FAN14G0979 Fragaria x ananassa HOM05D006368 ORTHO05D006739 6.3e-06 56.2 100 41.0
TPR.G6682 Trifolium pratense HOM05D010147 ORTHO05D006739 6.3e-06 56.2 436 22.7
FAN09G0606 Fragaria x ananassa HOM05D006368 ORTHO05D006739 8.2e-06 55.8 208 28.8
FAN09G4111 Fragaria x ananassa HOM05D006368 ORTHO05D006739 8.2e-06 55.8 100 34.0
MBI11_g05443_MAGBIO Magnolia biondii HOM05D000151 ORTHO05D000074 8.2e-06 55.8 93 37.6
Medtr7g069800 Medicago truncatula HOM05D010147 ORTHO05D006739 8.2e-06 55.8 394 22.8


User provided reference genes

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