Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN05G0243 Fragaria x ananassa HOM05D007040 ORTHO05D017016 0.0e+00 1896.7 936 100.0
FAN05G3694 Fragaria x ananassa HOM05D007040 ORTHO05D017016 0.0e+00 1414.8 750 93.7
FAN07G2054 Fragaria x ananassa HOM05D007040 ORTHO05D017016 0.0e+00 1229.9 781 81.7
FvH4_4g02210 Fragaria vesca HOM05D007040 ORTHO05D017016 1.4e-245 853.6 643 71.4
FAN17G1088 Fragaria x ananassa HOM05D007040 ORTHO05D017016 9.5e-189 664.8 791 51.2
FAN16G1318 Fragaria x ananassa HOM05D007040 ORTHO05D017016 1.3e-126 458.4 353 70.0
FvH4_1g25700 Fragaria vesca HOM05D007040 ORTHO05D017016 4.1e-115 420.2 317 70.0
FAN16G0371 Fragaria x ananassa HOM05D007040 ORTHO05D025561 1.1e-83 315.8 229 77.3
RcHm_v2.0_Chr5g0047301 Rosa chinensis HOM05D007040 ORTHO05D017016 2.6e-77 294.7 419 44.2
FAN28G1109 Fragaria x ananassa HOM05D007040 ORTHO05D017016 3.4e-77 294.3 226 70.8
FAN05G0562 Fragaria x ananassa HOM05D007040 ORTHO05D013535 1.3e-73 282.3 159 91.2
FvH4_4g14564 Fragaria vesca HOM05D007040 ORTHO05D017016 1.3e-68 265.8 417 41.0
FAN15G1458 Fragaria x ananassa HOM05D007040 ORTHO05D001602 1.0e-62 246.1 530 32.6
FAN27G3262 Fragaria x ananassa HOM05D007040 ORTHO05D001602 2.3e-62 245.0 681 31.0
FAN14G1747 Fragaria x ananassa HOM05D007040 ORTHO05D001602 6.8e-62 243.4 661 30.6
FAN21G2590 Fragaria x ananassa HOM05D007040 ORTHO05D001602 1.4e-59 235.7 655 30.8
FAN23G1065 Fragaria x ananassa HOM05D007040 ORTHO05D001602 1.7e-57 228.8 635 29.9
FAN20G2118 Fragaria x ananassa HOM05D007040 ORTHO05D001602 1.3e-52 212.6 266 43.2
FvH4_2g11190 Fragaria vesca HOM05D007040 ORTHO05D001602 1.7e-52 212.2 378 36.2
FAN05G2524 Fragaria x ananassa HOM05D007040 ORTHO05D001602 1.4e-51 209.1 642 28.0
FAN03G1439 Fragaria x ananassa HOM05D007040 ORTHO05D001602 4.1e-51 207.6 622 29.9
FAN02G0486 Fragaria x ananassa HOM05D007040 ORTHO05D001602 1.2e-50 206.1 391 35.8
FvH4_6g24041 Fragaria vesca HOM05D007040 ORTHO05D001602 1.0e-49 203.0 349 35.5
FAN02G4542 Fragaria x ananassa HOM05D007040 ORTHO05D001602 1.7e-49 202.2 465 32.3
FAN23G0411 Fragaria x ananassa HOM05D007040 ORTHO05D001602 9.5e-48 196.4 585 29.2
FAN09G3473 Fragaria x ananassa HOM05D007040 ORTHO05D001602 8.1e-47 193.4 644 28.9
FvH4_2g16130 Fragaria vesca HOM05D007040 ORTHO05D001602 1.4e-46 192.6 222 48.6
FAN08G1044 Fragaria x ananassa HOM05D007040 ORTHO05D001602 5.2e-46 190.7 423 32.6
FAN23G1647 Fragaria x ananassa HOM05D007040 ORTHO05D001602 2.6e-45 188.3 642 27.9
FAN05G5575 Fragaria x ananassa HOM05D007040 ORTHO05D001602 1.9e-43 182.2 590 30.3
FAN26G1067 Fragaria x ananassa HOM05D002010 ORTHO05D001602 3.1e-38 164.9 244 38.5
FAN28G0487 Fragaria x ananassa HOM05D007040 ORTHO05D001602 2.1e-34 152.1 330 32.4
FAN26G0720 Fragaria x ananassa HOM05D007040 ORTHO05D001602 6.0e-34 150.6 189 44.4
FAN23G1311 Fragaria x ananassa HOM05D007040 ORTHO05D001602 7.6e-29 133.7 179 43.0
FAN15G1914 Fragaria x ananassa HOM05D007040 ORTHO05D001602 3.8e-28 131.3 131 51.1
FvH4_1g02840 Fragaria vesca HOM05D007040 ORTHO05D025561 4.9e-28 131.0 180 50.0
FvH4_2g14880 Fragaria vesca HOM05D007040 ORTHO05D012106 1.3e-25 122.9 582 24.2
FAN17G2479 Fragaria x ananassa HOM05D007040 ORTHO05D001602 3.3e-24 118.2 605 24.6
QL02p010396 Quercus lobata HOM05D002010 ORTHO05D000502 3.3e-24 118.2 223 37.2
FAN02G3936 Fragaria x ananassa HOM05D007040 ORTHO05D001602 4.8e-23 114.4 176 37.5
FAN24G2329 Fragaria x ananassa HOM05D007040 ORTHO05D001602 4.8e-23 114.4 216 36.6
Dinv09626 Davidia involucrata HOM05D002010 ORTHO05D001602 5.3e-22 110.9 323 25.1
FAN20G0008 Fragaria x ananassa HOM05D007040 ORTHO05D001602 2.6e-21 108.6 364 28.6
Dinv08992 Davidia involucrata HOM05D002010 ORTHO05D001602 9.9e-21 106.7 247 27.1
FAN24G3215 Fragaria x ananassa HOM05D007040 ORTHO05D001602 2.9e-20 105.1 106 50.9
Dinv03360 Davidia involucrata HOM05D002010 ORTHO05D001602 6.4e-20 104.0 332 26.8
Dinv13093 Davidia involucrata HOM05D002010 ORTHO05D001602 6.4e-20 104.0 269 27.1
Dinv05229 Davidia involucrata HOM05D002010 ORTHO05D001602 8.4e-20 103.6 256 27.0
Dinv24716 Davidia involucrata HOM05D002010 ORTHO05D001602 8.4e-20 103.6 269 27.1
FAN05G2210 Fragaria x ananassa HOM05D007040 ORTHO05D013535 1.1e-19 103.2 185 43.2
Dinv00203 Davidia involucrata HOM05D002010 ORTHO05D001602 1.4e-19 102.8 247 26.7
Dinv04682 Davidia involucrata HOM05D002010 ORTHO05D001602 1.4e-19 102.8 256 26.6
Dinv10756 Davidia involucrata HOM05D002010 ORTHO05D001602 5.4e-19 100.9 269 26.4
Dinv21511 Davidia involucrata HOM05D002010 ORTHO05D001602 5.4e-19 100.9 269 26.4
Dinv03884 Davidia involucrata HOM05D002010 ORTHO05D001602 9.3e-19 100.1 269 26.0
FAN02G3795 Fragaria x ananassa HOM05D007040 ORTHO05D013535 9.3e-19 100.1 145 53.1
FAN05G4005 Fragaria x ananassa HOM05D007040 ORTHO05D001602 9.3e-19 100.1 230 33.0
Dinv39029 Davidia involucrata HOM05D002010 ORTHO05D001602 1.2e-18 99.8 269 26.0
Dinv09159 Davidia involucrata HOM05D002010 ORTHO05D001602 1.6e-18 99.4 243 27.2
Dinv14701 Davidia involucrata HOM05D002010 ORTHO05D001602 2.1e-18 99.0 269 27.1
TAR325G0002 Trochodendron aralioides HOM05D002010 ORTHO05D001602 2.1e-18 99.0 316 25.0
Dinv19302 Davidia involucrata HOM05D002010 ORTHO05D001602 3.5e-18 98.2 247 27.1
Dinv25862 Davidia involucrata HOM05D002010 ORTHO05D001602 4.6e-18 97.8 269 26.0
FvH4_1g29480 Fragaria vesca HOM05D007040 ORTHO05D013535 4.6e-18 97.8 68 77.9
Dinv36416 Davidia involucrata HOM05D002010 ORTHO05D001602 1.3e-17 96.3 269 26.0
Dinv34720 Davidia involucrata HOM05D002010 ORTHO05D001602 1.8e-17 95.9 250 28.4
Dinv26201 Davidia involucrata HOM05D002010 ORTHO05D001602 2.3e-17 95.5 243 26.3
FAN05G2679 Fragaria x ananassa HOM05D007040 ORTHO05D012106 3.0e-17 95.1 186 34.4
TAR325G0001 Trochodendron aralioides HOM05D002010 ORTHO05D001602 3.0e-17 95.1 237 29.1
Dinv13642 Davidia involucrata HOM05D002010 ORTHO05D001602 3.9e-17 94.7 245 27.3
Dinv12540 Davidia involucrata HOM05D002010 ORTHO05D001602 6.7e-17 94.0 245 27.8
Dinv22441 Davidia involucrata HOM05D002010 ORTHO05D001602 1.5e-16 92.8 247 27.5
TAR362G1336 Trochodendron aralioides HOM05D002010 ORTHO05D001602 1.5e-16 92.8 214 28.5
PSO384G4043 Papaver somniferum HOM05D002010 ORTHO05D001602 4.3e-16 91.3 242 30.2
Dinv18724 Davidia involucrata HOM05D002010 ORTHO05D001602 5.6e-16 90.9 209 30.1
Dinv36990 Davidia involucrata HOM05D002010 ORTHO05D001602 5.6e-16 90.9 209 30.1
COL.COLO4_38169 Corchorus olitorius HOM05D015334 ORTHO05D016256 7.4e-16 90.5 298 26.2
Dinv27102 Davidia involucrata HOM05D002010 ORTHO05D001602 9.6e-16 90.1 204 28.9
Dinv33750 Davidia involucrata HOM05D002010 ORTHO05D001602 9.6e-16 90.1 247 28.3
FAN10G1400 Fragaria x ananassa HOM05D007040 ORTHO05D205826 9.6e-16 90.1 72 72.2
FAN27G2232 Fragaria x ananassa HOM05D007040 ORTHO05D001602 9.6e-16 90.1 173 35.8
Dinv34094 Davidia involucrata HOM05D002010 ORTHO05D001602 1.3e-15 89.7 258 27.1
FAN03G3284 Fragaria x ananassa HOM05D007040 ORTHO05D001602 1.3e-15 89.7 83 50.6
TAR629G2840 Trochodendron aralioides HOM05D002010 ORTHO05D001602 1.3e-15 89.7 161 34.2
Dinv13009 Davidia involucrata HOM05D002010 ORTHO05D001602 2.1e-15 89.0 183 32.2
COL.COLO4_35428 Corchorus olitorius HOM05D002010 ORTHO05D001602 2.8e-15 88.6 223 30.5
CSS0041665 Camellia sinensis var. sinensis HOM05D002010 ORTHO05D001602 3.7e-15 88.2 276 28.3
Dinv07710 Davidia involucrata HOM05D002010 ORTHO05D001602 3.7e-15 88.2 251 25.1
CSS0015520 Camellia sinensis var. sinensis HOM05D002010 ORTHO05D001602 4.8e-15 87.8 276 28.3
CSS0018784 Camellia sinensis var. sinensis HOM05D002010 ORTHO05D001602 4.8e-15 87.8 276 28.3
CSS0023629 Camellia sinensis var. sinensis HOM05D002010 ORTHO05D001602 4.8e-15 87.8 276 28.3
CSS0045752 Camellia sinensis var. sinensis HOM05D002010 ORTHO05D001602 4.8e-15 87.8 276 28.3
PSO017G4629 Papaver somniferum HOM05D002010 ORTHO05D001602 1.8e-14 85.9 211 26.1
Dinv01931 Davidia involucrata HOM05D002010 ORTHO05D001602 4.0e-14 84.7 208 27.4
Dinv21136 Davidia involucrata HOM05D002010 ORTHO05D001602 6.9e-14 84.0 187 27.3
Dinv13534 Davidia involucrata HOM05D002010 ORTHO05D001602 9.0e-14 83.6 234 25.2
PSO782G1237 Papaver somniferum HOM05D002010 ORTHO05D001602 1.2e-13 83.2 230 26.5
Dinv02873 Davidia involucrata HOM05D002010 ORTHO05D001602 1.5e-13 82.8 243 25.1
Dinv05679 Davidia involucrata HOM05D002010 ORTHO05D001602 1.5e-13 82.8 155 31.0
Dinv25992 Davidia involucrata HOM05D001680 ORTHO05D001596 1.5e-13 82.8 230 28.7
CSS0003895 Camellia sinensis var. sinensis HOM05D002010 ORTHO05D001602 2.0e-13 82.4 180 33.9
CSS0012227 Camellia sinensis var. sinensis HOM05D002010 ORTHO05D001602 3.4e-13 81.6 180 33.9
CSS0030247 Camellia sinensis var. sinensis HOM05D002010 ORTHO05D001602 3.4e-13 81.6 180 33.9
FAN15G2806 Fragaria x ananassa HOM05D007040 ORTHO05D012106 4.5e-13 81.3 103 41.7
vmacro13075 Vaccinium macrocarpon HOM05D002010 ORTHO05D001602 4.5e-13 81.3 239 29.3
CSS0012880 Camellia sinensis var. sinensis HOM05D002010 ORTHO05D001602 5.8e-13 80.9 180 33.3
FAN16G2256 Fragaria x ananassa HOM05D007040 ORTHO05D001602 1.3e-12 79.7 198 26.3
TAR625G0747 Trochodendron aralioides HOM05D002010 ORTHO05D001602 1.7e-12 79.3 196 24.5
COL.COLO4_08517 Corchorus olitorius HOM05D000890 ORTHO05D000697 2.2e-12 79.0 169 29.6
Dinv18170 Davidia involucrata HOM05D002010 ORTHO05D001602 3.8e-12 78.2 104 38.5
FAN13G0440 Fragaria x ananassa HOM05D007040 ORTHO05D001602 3.8e-12 78.2 163 30.7
Dinv19806 Davidia involucrata HOM05D002010 ORTHO05D001602 4.9e-12 77.8 183 29.0
Dinv23080 Davidia involucrata HOM05D002010 ORTHO05D001602 4.9e-12 77.8 183 29.0
Dinv37000 Davidia involucrata HOM05D002010 ORTHO05D001602 4.9e-12 77.8 183 29.0
FAN05G4305 Fragaria x ananassa HOM05D007040 ORTHO05D013535 8.4e-12 77.0 121 48.8
FAN10G2286 Fragaria x ananassa HOM05D007040 ORTHO05D204381 1.4e-11 76.3 66 68.2
Dinv05343 Davidia involucrata HOM05D002010 ORTHO05D001602 2.5e-11 75.5 109 35.8
FAN08G0984 Fragaria x ananassa HOM05D007040 ORTHO05D202313 5.5e-11 74.3 59 67.8
Dinv05135 Davidia involucrata HOM05D002010 ORTHO05D001602 7.1e-11 73.9 217 24.4
Dinv11446 Davidia involucrata HOM05D002010 ORTHO05D001602 7.1e-11 73.9 130 33.8
Dinv01698 Davidia involucrata HOM05D002010 ORTHO05D001602 9.3e-11 73.6 129 31.8
Dinv06448 Davidia involucrata HOM05D002010 ORTHO05D001602 9.3e-11 73.6 121 31.4
vmacro11007 Vaccinium macrocarpon HOM05D002010 ORTHO05D001602 9.3e-11 73.6 258 26.7
PSO832G3401 Papaver somniferum HOM05D002010 ORTHO05D001602 1.2e-10 73.2 145 30.3
Dinv10265 Davidia involucrata HOM05D002010 ORTHO05D001602 1.6e-10 72.8 120 32.5
Dinv18128 Davidia involucrata HOM05D002010 ORTHO05D001602 4.6e-10 71.2 250 24.0
TAR622G0226 Trochodendron aralioides HOM05D002010 ORTHO05D001602 7.9e-10 70.5 108 35.2
TAR371G0532 Trochodendron aralioides HOM05D002010 ORTHO05D001602 1.0e-09 70.1 159 29.6
Dinv02877 Davidia involucrata HOM05D002010 ORTHO05D001602 1.3e-09 69.7 111 29.7
Dinv19284 Davidia involucrata HOM05D002010 ORTHO05D001602 1.3e-09 69.7 147 27.2
COL.COLO4_24693 Corchorus olitorius HOM05D016055 ORTHO05D016256 3.0e-09 68.6 122 35.2
Dinv15370 Davidia involucrata HOM05D002010 ORTHO05D001602 3.9e-09 68.2 106 34.9
Dinv18909 Davidia involucrata HOM05D002010 ORTHO05D001602 5.1e-09 67.8 233 24.0
COL.COLO4_07073 Corchorus olitorius HOM05D016055 ORTHO05D016256 6.7e-09 67.4 122 36.1
COL.COLO4_31370 Corchorus olitorius HOM05D016055 ORTHO05D016256 6.7e-09 67.4 124 33.9
Dinv38959 Davidia involucrata HOM05D002010 ORTHO05D001602 6.7e-09 67.4 203 27.1
QL02p034770 Quercus lobata HOM05D002010 ORTHO05D016256 6.7e-09 67.4 105 36.2
FAN23G0445 Fragaria x ananassa HOM05D007040 ORTHO05D001602 8.7e-09 67.0 170 28.8
TAR633G1996 Trochodendron aralioides HOM05D002010 ORTHO05D001602 8.7e-09 67.0 223 24.7
FAN13G1914 Fragaria x ananassa HOM05D007040 ORTHO05D013535 1.1e-08 66.6 37 91.9
Rhsim13G0108400 Rhododendron simsii HOM05D008460 ORTHO05D001602 3.3e-08 65.1 223 24.7
FAN02G2163 Fragaria x ananassa HOM05D007040 ORTHO05D001602 4.3e-08 64.7 50 58.0
TAR374G0327 Trochodendron aralioides HOM05D002546 ORTHO05D002671 7.4e-08 63.9 197 25.9
COL.COLO4_24703 Corchorus olitorius HOM05D016055 ORTHO05D016256 1.3e-07 63.2 119 31.9
Dinv28157 Davidia involucrata HOM05D002010 ORTHO05D001602 2.8e-07 62.0 117 30.8
Thecc.05G161900 Theobroma cacao HOM05D002010 ORTHO05D001602 2.8e-07 62.0 106 34.9
TAR636G0802 Trochodendron aralioides HOM05D002010 ORTHO05D001602 8.2e-07 60.5 145 30.3
FAN17G2358 Fragaria x ananassa HOM05D007040 ORTHO05D001602 1.1e-06 60.1 39 64.1
FAN15G2267 Fragaria x ananassa HOM05D007040 ORTHO05D001602 1.4e-06 59.7 57 47.4
Dinv20759 Davidia involucrata HOM05D002010 ORTHO05D001602 1.8e-06 59.3 104 31.7
Dinv44681 Davidia involucrata HOM05D002010 ORTHO05D001602 2.4e-06 58.9 79 36.7
TAR374G0888 Trochodendron aralioides HOM05D002010 ORTHO05D001602 4.0e-06 58.2 107 29.9
Zm00001eb163540 Zea mays HOM05D001371 ORTHO05D001319 5.3e-06 57.8 187 28.9


User provided reference genes

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