Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN05G0163 Fragaria x ananassa HOM05D006079 ORTHO05D008156 3.0e-243 844.7 427 100.0
FAN02G2404 Fragaria x ananassa HOM05D006079 ORTHO05D008156 3.1e-240 834.7 427 99.1
FvH4_6g12250 Fragaria vesca HOM05D006079 ORTHO05D008156 3.6e-236 821.2 427 97.4
FAN14G2872 Fragaria x ananassa HOM05D006079 ORTHO05D008156 4.7e-236 820.8 427 97.2
FAN09G0680 Fragaria x ananassa HOM05D006079 ORTHO05D008156 9.8e-234 813.1 427 96.5
RcHm_v2.0_Chr3g0464051 Rosa chinensis HOM05D006079 ORTHO05D008156 9.8e-226 786.6 428 93.0
Prupe.6G269000 Prunus persica HOM05D006079 ORTHO05D008156 2.9e-217 758.4 427 88.8
Cfa017268 Carpinus fangiana HOM05D006079 ORTHO05D008156 3.5e-207 724.9 429 83.7
MD12G1158600 Malus domestica HOM05D006079 ORTHO05D008156 1.7e-206 722.6 428 84.8
Haze_20934 Corylus avellana HOM05D006079 ORTHO05D008156 1.2e-204 716.5 433 82.0
CiPaw.10G153700 Carya illinoinensis HOM05D006079 ORTHO05D008156 3.4e-202 708.4 428 80.1
CANSAT35G1087 Cannabis sativa HOM05D006079 ORTHO05D008156 1.3e-198 696.4 427 80.6
Manes.08G086700 Manihot esculenta HOM05D006079 ORTHO05D008156 2.5e-197 692.2 427 78.0
QL07p036333 Quercus lobata HOM05D006079 ORTHO05D008156 2.6e-194 682.2 432 79.4
Dinv35521 Davidia involucrata HOM05D006079 ORTHO05D008156 3.4e-194 681.8 430 78.6
CSS0045639 Camellia sinensis var. sinensis HOM05D006079 ORTHO05D008156 1.3e-193 679.9 429 78.8
PGR031G3170 Punica granatum HOM05D006079 ORTHO05D008156 2.9e-193 678.7 432 78.9
GSVIVG01034026001 Vitis vinifera HOM05D006079 ORTHO05D008156 1.4e-192 676.4 427 77.8
Psat3g135200 Pisum sativum HOM05D006079 ORTHO05D008156 5.4e-192 674.5 430 78.1
Actinidia13795 Actinidia chinensis HOM05D006079 ORTHO05D008156 1.2e-191 673.3 429 78.6
Glyma.07G143100 Glycine max HOM05D006079 ORTHO05D008156 1.8e-190 669.5 428 79.0
Eucgr.B02761 Eucalyptus grandis HOM05D006079 ORTHO05D008156 8.7e-190 667.2 427 76.6
Cpa.g.sc56.97 Carica papaya HOM05D006079 ORTHO05D008156 2.5e-189 665.6 423 78.0
COL.COLO4_14632 Corchorus olitorius HOM05D006079 ORTHO05D008156 7.4e-189 664.1 427 76.8
Thecc.05G024000 Theobroma cacao HOM05D006079 ORTHO05D008156 1.6e-188 662.9 427 76.8
Duzib093G0682 Durio zibethinus HOM05D006079 ORTHO05D008156 9.0e-187 657.1 425 73.2
Lj1g0026135 Lotus japonicus HOM05D006079 ORTHO05D008156 1.9e-184 649.4 433 76.7
Duzib128G0993 Durio zibethinus HOM05D006079 ORTHO05D008156 5.5e-184 647.9 427 74.7
Ca_09158_v3 Cicer arietinum L. HOM05D006079 ORTHO05D008156 2.7e-183 645.6 428 76.4
Atru.chr8.2129 Acer truncatum HOM05D006079 ORTHO05D008156 7.9e-183 644.0 431 71.5
Gorai.012G110900 Gossypium raimondii HOM05D006079 ORTHO05D008156 1.0e-182 643.7 427 71.2
Gohir.A04G087500 Gossypium hirsutum HOM05D006079 ORTHO05D008156 1.3e-182 643.3 427 71.9
TWI77G0608 Tripterygium wilfordii HOM05D006079 ORTHO05D008156 2.3e-182 642.5 427 73.5
Nn2g13580 Nelumbo nucifera HOM05D006079 ORTHO05D008156 3.0e-182 642.1 427 71.9
Ciclev10011790m.g Citrus clementina HOM05D006079 ORTHO05D008156 5.1e-182 641.3 430 75.6
MELO3C003219.2 Cucumis melo HOM05D006079 ORTHO05D008156 1.1e-181 640.2 427 74.5
Lalb_Chr01g0022871 Lupinus albus HOM05D006079 ORTHO05D008156 2.5e-181 639.0 429 75.5
Phvul.008G111400 Phaseolus vulgaris HOM05D006079 ORTHO05D008156 2.5e-181 639.0 428 74.8
Medtr7g066250 Medicago truncatula HOM05D006079 ORTHO05D008156 4.3e-181 638.3 429 76.0
CsaV3_4G025930 Cucumis sativus L. HOM05D006079 ORTHO05D008156 9.6e-181 637.1 427 74.0
Nitab4.5_0007539g0010 Nicotiana tabacum HOM05D006079 ORTHO05D008156 2.1e-180 636.0 433 73.9
arahy.Tifrunner.gnm1.ann1.3KU04F Arachis hypogaea HOM05D006079 ORTHO05D008156 5.3e-179 631.3 429 76.2
Sabra06G0073200 Salix brachista HOM05D006079 ORTHO05D008156 5.3e-179 631.3 429 73.2
ClCG04G007320 Citrullus lanatus HOM05D006079 ORTHO05D008156 2.0e-178 629.4 427 73.1
PGSC0003DMG400020333 Solanum tuberosum HOM05D006079 ORTHO05D008156 2.6e-178 629.0 434 72.6
Solyc09g011880.3 Solanum lycopersicum HOM05D006079 ORTHO05D008156 3.4e-178 628.6 432 73.1
Sopen09g006700 Solanum pennellii HOM05D006079 ORTHO05D008156 4.5e-178 628.2 432 72.9
Gohir.D04G127900 Gossypium hirsutum HOM05D006079 ORTHO05D008156 3.8e-177 625.2 427 70.0
Peaxi162Scf01352g00015 Petunia axillaris HOM05D006079 ORTHO05D008156 4.9e-177 624.8 423 72.1
Sc25g0003370 Simmondsia chinensis HOM05D006079 ORTHO05D008156 4.9e-177 624.8 428 73.1
Nitab4.5_0000008g0510 Nicotiana tabacum HOM05D006079 ORTHO05D008156 6.5e-177 624.4 432 71.8
MSTRG.5605 Avicennia marina HOM05D006079 ORTHO05D008156 2.5e-176 622.5 429 73.9
Potri.006G095400 Populus trichocarpa HOM05D006079 ORTHO05D008156 3.2e-176 622.1 429 71.8
SGA_v2.0_scaffold85G26780 Striga asiatica HOM05D006079 ORTHO05D008156 1.6e-175 619.8 432 71.3
Lj2A83T75 Lonicera japonica HOM05D006079 ORTHO05D008156 2.1e-175 619.4 405 77.5
Sed0002088 Sechium edule HOM05D006079 ORTHO05D008156 1.0e-174 617.1 427 71.2
arahy.Tifrunner.gnm1.ann1.GZPT0A Arachis hypogaea HOM05D006079 ORTHO05D008156 1.3e-174 616.7 453 71.7
PSO585G0039 Papaver somniferum HOM05D006079 ORTHO05D008156 1.6e-172 609.8 413 70.2
TAR633G1690 Trochodendron aralioides HOM05D006079 ORTHO05D008156 4.5e-170 601.7 437 68.4
PSO384G3626 Papaver somniferum HOM05D006079 ORTHO05D008156 3.8e-169 598.6 413 69.7
Cc06_g01790 Coffea canephora HOM05D006079 ORTHO05D008156 3.6e-167 592.0 435 70.1
ECA236G0495 Erigeron canadensis HOM05D006079 ORTHO05D008156 3.9e-166 588.6 448 65.2
Migut.J00236 Erythranthe guttata HOM05D006079 ORTHO05D008156 5.7e-165 584.7 429 67.4
Aqoxy1G00752 Aquilegia oxysepala HOM05D006079 ORTHO05D008156 1.4e-163 580.1 429 68.5
HanXRQChr04g0124711 Helianthus annuus HOM05D006079 ORTHO05D008156 1.4e-163 580.1 428 66.8
Actinidia29142 Actinidia chinensis HOM05D006079 ORTHO05D008156 4.1e-163 578.6 421 72.2
Oeu015011.1 Olea europaea HOM05D006079 ORTHO05D008156 7.7e-162 574.3 409 73.1
THA.LOC104823390 Tarenaya hassleriana HOM05D006079 ORTHO05D008156 1.0e-161 573.9 427 66.3
Rhsim05G0203500 Rhododendron simsii HOM05D006079 ORTHO05D008156 6.5e-161 571.2 354 79.9
Ah.11g045330 Amaranthus hybridus HOM05D006079 ORTHO05D008156 4.7e-159 565.1 435 68.7
AUR62041356 Chenopodium quinoa HOM05D006079 ORTHO05D008156 3.3e-157 558.9 396 70.7
CARHR132560 Cardamine hirsuta HOM05D006079 ORTHO05D008156 6.3e-156 554.7 431 63.6
DCAR_024040 Daucus carota HOM05D006079 ORTHO05D008156 1.8e-155 553.1 459 61.4
Sp4g20320 Schrenkiella parvula HOM05D006079 ORTHO05D008156 1.2e-154 550.4 427 64.6
BcaB02g09226 Brassica carinata HOM05D006079 ORTHO05D008156 2.0e-154 549.7 428 62.4
BcaC02g11943 Brassica carinata HOM05D006079 ORTHO05D008156 3.4e-154 548.9 428 62.6
VMungo1383G1007 Vigna mungo HOM05D006079 ORTHO05D008156 5.9e-154 548.1 383 73.9
Aa31LG5G23170 Aethionema arabicum HOM05D006079 ORTHO05D008156 1.0e-153 547.4 428 64.0
Thhalv10016725m.g Eutrema salsugineum HOM05D006079 ORTHO05D008156 1.0e-153 547.4 428 62.6
vmacro20226 Vaccinium macrocarpon HOM05D006079 ORTHO05D008156 6.5e-153 544.7 438 66.2
Lsat_1_v5_gn_8_82341 Lactuca sativa HOM05D006079 ORTHO05D008156 5.5e-152 541.6 410 70.0
MBI05_g36624_MAGBIO Magnolia biondii HOM05D006079 ORTHO05D008156 1.6e-151 540.0 329 79.0
BolC4t22573H Brassica oleracea HOM05D006079 ORTHO05D008156 3.6e-151 538.9 416 63.7
AL4G34980 Arabidopsis lyrata HOM05D006079 ORTHO05D008156 4.7e-151 538.5 427 62.5
A05p08000 Brassica napus HOM05D006079 ORTHO05D008156 6.1e-151 538.1 428 62.1
AT2G38000 Arabidopsis thaliana HOM05D006079 ORTHO05D008156 8.0e-151 537.7 428 62.4
EL10Ac5g11535 Beta vulgaris HOM05D006079 ORTHO05D008156 8.8e-150 534.3 433 61.7
Carub.0004s1997 Capsella rubella HOM05D006079 ORTHO05D008156 7.4e-149 531.2 427 61.8
BcaB02g09227 Brassica carinata HOM05D006079 ORTHO05D008156 8.2e-148 527.7 428 60.7
BraA05t19766Z Brassica rapa HOM05D006079 ORTHO05D008156 8.2e-148 527.7 414 62.3
Hma1.2p1_0763F.1_g214490 Hydrangea macrophylla HOM05D006079 ORTHO05D008156 5.3e-147 525.0 426 66.2
CDE04G0224 Ceratophyllum demersum HOM05D006079 ORTHO05D008156 5.5e-144 515.0 406 64.5
ATR0618G129 Amborella trichopoda HOM05D006079 ORTHO05D008156 1.0e-142 510.8 419 64.0
Os05g0316200 Oryza sativa ssp. japonica HOM05D006079 ORTHO05D008156 2.0e-141 506.5 403 64.8
HPP92_006654 Vanilla planifolia HOM05D006079 ORTHO05D008156 5.3e-139 498.4 429 58.3
Gohir.A13G086740 Gossypium hirsutum HOM05D006079 ORTHO05D008156 2.2e-137 493.0 425 59.1
unitig_26.g9105 Utricularia gibba HOM05D006079 ORTHO05D008156 2.9e-137 492.7 400 60.2
C04p09660 Brassica napus HOM05D006079 ORTHO05D008156 1.1e-136 490.7 397 61.5
Zm00001eb169630 Zea mays HOM05D006079 ORTHO05D008156 6.1e-135 485.0 403 60.5
SEGI_08405 Sequoiadendron giganteum HOM05D006079 ORTHO05D008156 1.3e-124 450.7 326 69.0
TPR.G29287 Trifolium pratense HOM05D006079 ORTHO05D008156 2.0e-114 416.8 264 79.2
CAN.G338.65 Capsicum annuum HOM05D006079 ORTHO05D008156 7.3e-112 408.3 304 70.1
CDE07G0746 Ceratophyllum demersum HOM05D006079 ORTHO05D008156 1.1e-107 394.4 420 50.5
AagrBONN_evm.TU.Sc2ySwM_117.3694 Anthoceros agrestis HOM05D006079 ORTHO05D008156 6.0e-98 362.1 319 55.5
Migut.J00237 Erythranthe guttata HOM05D006079 ORTHO05D008156 8.9e-94 348.2 398 48.7
Mapoly0040s0094 Marchantia polymorpha HOM05D006079 ORTHO05D008156 8.7e-89 331.6 424 44.8
SMO172G0100 Selaginella moellendorffii HOM05D006079 ORTHO05D008156 2.5e-88 330.1 320 56.6
BcaC02g11941 Brassica carinata HOM05D006079 ORTHO05D008156 1.3e-87 327.8 218 69.7
Pp3c16_16710 Physcomitrium patens HOM05D006079 ORTHO05D008156 9.3e-83 311.6 423 42.8
HPP92_006629 Vanilla planifolia HOM05D006079 ORTHO05D008156 5.3e-78 295.8 305 50.5
Gohir.D13G085200 Gossypium hirsutum HOM05D006079 ORTHO05D008156 1.4e-75 287.7 200 65.5
MD04G1144700 Malus domestica HOM05D006079 ORTHO05D008156 1.2e-66 258.1 156 80.1
Gohir.A01G178136 Gossypium hirsutum HOM05D006079 ORTHO05D008156 8.7e-57 225.3 166 60.2
Lsat_1_v5_gn_5_162881 Lactuca sativa HOM05D006079 ORTHO05D008156 6.3e-55 219.2 135 72.6
CAN.G686.13 Capsicum annuum HOM05D006079 ORTHO05D008156 8.2e-55 218.8 130 80.0
Thhalv10017300m.g Eutrema salsugineum HOM05D006079 ORTHO05D008156 3.4e-45 186.8 223 44.8
Gorai.006G157700 Gossypium raimondii HOM05D006079 ORTHO05D008156 1.7e-39 167.9 122 63.1
Gohir.D09G137350 Gossypium hirsutum HOM05D006079 ORTHO05D008156 3.7e-39 166.8 122 63.1
QL07p036284 Quercus lobata HOM05D006079 ORTHO05D338014 8.2e-39 165.6 98 76.5
TAR636G2503 Trochodendron aralioides HOM05D006079 ORTHO05D008156 2.8e-31 140.6 82 84.1
MD04G1144600 Malus domestica HOM05D006079 ORTHO05D032748 2.6e-29 134.0 92 82.6
Cc02_g12960 Coffea canephora HOM05D006079 ORTHO05D008156 1.0e-28 132.1 134 55.2
TPR.G34865 Trifolium pratense HOM05D006079 ORTHO05D008156 1.5e-27 128.3 109 62.4
MBI05_g36625_MAGBIO Magnolia biondii HOM05D006079 ORTHO05D008156 2.5e-19 100.9 95 56.8
BraA05t21464Z Brassica rapa HOM05D006079 ORTHO05D032748 2.4e-14 84.3 53 67.9
BcaC04g24204 Brassica carinata HOM05D006079 ORTHO05D032748 5.5e-11 73.2 67 53.7
QL05p054729 Quercus lobata HOM05D006079 ORTHO05D338210 6.8e-09 66.2 60 61.7


User provided reference genes

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