Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN04G3182 Fragaria x ananassa HOM05D008426 ORTHO05D029424 7.2e-212 740.3 382 100.0
FAN18G2145 Fragaria x ananassa HOM05D008426 ORTHO05D029424 6.0e-182 641.0 379 88.1
FAN08G3568 Fragaria x ananassa HOM05D008426 ORTHO05D029424 1.4e-162 576.6 340 89.7
FvH4_5g37877 Fragaria vesca HOM05D008426 ORTHO05D029424 2.4e-154 549.3 328 89.0
FAN04G1864 Fragaria x ananassa HOM05D008426 ORTHO05D035241 8.7e-141 504.2 392 71.2
FvH4_5g37880 Fragaria vesca HOM05D008426 ORTHO05D035241 3.1e-138 495.7 391 71.4
FAN17G0058 Fragaria x ananassa HOM05D008426 ORTHO05D016292 7.1e-135 484.6 357 75.6
FAN08G3427 Fragaria x ananassa HOM05D008426 ORTHO05D035241 2.5e-132 476.1 393 70.0
FvH4_6g40020 Fragaria vesca HOM05D008426 ORTHO05D016292 1.8e-125 453.4 395 67.3
FAN13G0956 Fragaria x ananassa HOM05D008426 ORTHO05D016292 5.3e-114 415.2 381 64.6
FAN13G3287 Fragaria x ananassa HOM05D008426 ORTHO05D035773 1.2e-105 387.5 395 61.0
FvH4_5g37900 Fragaria vesca HOM05D008426 ORTHO05D046301 2.6e-105 386.3 380 61.8
FAN18G1532 Fragaria x ananassa HOM05D008426 ORTHO05D046301 8.0e-102 374.8 384 60.4
FvH4_5g37342 Fragaria vesca HOM05D008426 ORTHO05D035773 5.0e-96 355.5 399 57.1
FAN18G2946 Fragaria x ananassa HOM05D008426 ORTHO05D035773 7.5e-92 341.7 394 55.3
FAN08G1017 Fragaria x ananassa HOM05D008426 ORTHO05D016292 3.7e-91 339.3 400 55.5
FAN04G0577 Fragaria x ananassa HOM05D008426 ORTHO05D000952 1.0e-85 321.2 301 60.1
FvH4_5g27770 Fragaria vesca HOM05D008426 ORTHO05D025493 5.1e-40 169.5 245 42.0
FAN18G0699 Fragaria x ananassa HOM05D008426 ORTHO05D016292 5.1e-40 169.5 201 49.8
FAN07G1804 Fragaria x ananassa HOM05D002161 ORTHO05D002619 1.1e-37 161.8 179 58.1
FvH4_3g36290 Fragaria vesca HOM05D008426 ORTHO05D025493 3.4e-36 156.8 255 40.0
FAN18G1467 Fragaria x ananassa HOM05D008426 ORTHO05D025493 2.9e-35 153.7 368 34.5
FvH4_5g29860 Fragaria vesca HOM05D008426 ORTHO05D025493 1.4e-34 151.4 335 35.8
FAN18G0700 Fragaria x ananassa HOM05D008426 ORTHO05D025493 1.6e-33 147.9 368 34.0
FvH4_5g35252 Fragaria vesca HOM05D008426 ORTHO05D016292 3.3e-31 140.2 241 36.5
FAN18G1614 Fragaria x ananassa HOM05D008426 ORTHO05D016292 7.4e-31 139.0 241 36.5
FvH4_5g31090 Fragaria vesca HOM05D008426 ORTHO05D016292 3.0e-24 117.1 375 29.6
FAN18G3062 Fragaria x ananassa HOM05D008426 ORTHO05D016292 1.2e-20 105.1 355 31.0
FvH4_5g31083 Fragaria vesca HOM05D008426 ORTHO05D016292 2.5e-18 97.4 272 31.6
FvH4_6g51360 Fragaria vesca HOM05D008426 ORTHO05D000952 2.5e-15 87.4 169 33.7
FAN14G4734 Fragaria x ananassa HOM05D008426 ORTHO05D000952 5.7e-15 86.3 169 33.1
FAN02G3776 Fragaria x ananassa HOM05D008426 ORTHO05D000952 1.6e-14 84.7 232 29.7
RcHm_v2.0_Chr1g0333911 Rosa chinensis HOM05D008426 ORTHO05D000952 1.6e-14 84.7 163 33.1
FAN03G0629 Fragaria x ananassa HOM05D008426 ORTHO05D000952 2.8e-14 84.0 222 31.1
FAN06G3625 Fragaria x ananassa HOM05D008426 ORTHO05D000952 2.8e-14 84.0 165 33.9
FvH4_7g06570 Fragaria vesca HOM05D008426 ORTHO05D000952 6.3e-14 82.8 223 30.5
FAN10G4302 Fragaria x ananassa HOM05D008426 ORTHO05D000952 6.3e-14 82.8 222 31.5
Ciclev10013622m.g Citrus clementina HOM05D002630 ORTHO05D000952 1.4e-13 81.6 196 29.6
RcHm_v2.0_Chr7g0236441 Rosa chinensis HOM05D010397 ORTHO05D000952 1.4e-13 81.6 178 33.7
RcHm_v2.0_Chr7g0236511 Rosa chinensis HOM05D010397 ORTHO05D000952 1.4e-13 81.6 178 33.7
Ciclev10033719m.g Citrus clementina HOM05D002630 ORTHO05D000952 1.8e-13 81.3 221 29.0
Ciclev10033536m.g Citrus clementina HOM05D002630 ORTHO05D000952 2.4e-13 80.9 221 29.0
Ciclev10033879m.g Citrus clementina HOM05D002630 ORTHO05D000952 2.4e-13 80.9 221 28.5
FAN05G2840 Fragaria x ananassa HOM05D003655 ORTHO05D004065 2.4e-13 80.9 233 30.5
Atru.chr12.1167 Acer truncatum HOM05D002630 ORTHO05D000952 3.1e-13 80.5 225 30.2
Ciclev10033957m.g Citrus clementina HOM05D002630 ORTHO05D000952 3.1e-13 80.5 221 29.0
Ciclev10033436m.g Citrus clementina HOM05D002630 ORTHO05D000952 4.1e-13 80.1 211 28.9
Ciclev10033541m.g Citrus clementina HOM05D002630 ORTHO05D000952 5.3e-13 79.7 221 28.5
RcHm_v2.0_Chr7g0230611 Rosa chinensis HOM05D010397 ORTHO05D000952 5.3e-13 79.7 244 30.7
Ciclev10033346m.g Citrus clementina HOM05D002630 ORTHO05D000952 4.5e-12 76.6 211 28.9
Atru.chr5.431 Acer truncatum HOM05D002630 ORTHO05D000952 1.0e-11 75.5 196 29.6
TWI14G0496 Tripterygium wilfordii HOM05D002630 ORTHO05D000952 1.0e-11 75.5 195 29.7
Ciclev10033459m.g Citrus clementina HOM05D002630 ORTHO05D000952 1.3e-11 75.1 167 29.9
FvH4_5g31040 Fragaria vesca HOM05D010397 ORTHO05D000952 1.3e-11 75.1 243 28.4
RcHm_v2.0_Chr5g0045961 Rosa chinensis HOM05D008426 ORTHO05D000952 1.7e-11 74.7 226 28.3
Ciclev10013691m.g Citrus clementina HOM05D002630 ORTHO05D000952 2.2e-11 74.3 267 26.6
Ciclev10013879m.g Citrus clementina HOM05D002630 ORTHO05D000952 2.2e-11 74.3 267 26.6
Atru.chr5.447 Acer truncatum HOM05D002630 ORTHO05D000952 2.9e-11 73.9 243 28.0
Sed0001946 Sechium edule HOM05D002630 ORTHO05D000952 2.9e-11 73.9 211 26.5
Ciclev10033526m.g Citrus clementina HOM05D002630 ORTHO05D000952 3.8e-11 73.6 211 28.4
Prupe.8G097100 Prunus persica HOM05D011155 ORTHO05D000952 3.8e-11 73.6 260 30.4
RcHm_v2.0_Chr5g0045711 Rosa chinensis HOM05D008426 ORTHO05D000952 3.8e-11 73.6 220 27.3
RcHm_v2.0_Chr5g0045741 Rosa chinensis HOM05D008426 ORTHO05D000952 3.8e-11 73.6 220 27.3
FvH4_6g26310 Fragaria vesca HOM05D002630 ORTHO05D000952 5.0e-11 73.2 122 34.4
FAN02G0323 Fragaria x ananassa HOM05D002630 ORTHO05D000952 5.0e-11 73.2 122 34.4
FAN05G5746 Fragaria x ananassa HOM05D002630 ORTHO05D000952 5.0e-11 73.2 122 34.4
FAN08G0453 Fragaria x ananassa HOM05D008426 ORTHO05D010297 5.0e-11 73.2 36 86.1
FAN09G0542 Fragaria x ananassa HOM05D002630 ORTHO05D000952 5.0e-11 73.2 122 34.4
TWI75G0791 Tripterygium wilfordii HOM05D002630 ORTHO05D000952 8.5e-11 72.4 172 28.5
Atru.chr5.426 Acer truncatum HOM05D002630 ORTHO05D000952 2.5e-10 70.9 178 30.9
Prupe.4G230600 Prunus persica HOM05D002630 ORTHO05D000952 2.5e-10 70.9 222 25.2
RcHm_v2.0_Chr2g0126751 Rosa chinensis HOM05D002630 ORTHO05D000952 9.4e-10 68.9 160 29.4
FAN21G3454 Fragaria x ananassa HOM05D008426 ORTHO05D000952 2.7e-09 67.4 223 26.0
FAN09G2976 Fragaria x ananassa HOM05D008426 ORTHO05D022689 3.6e-09 67.0 256 27.3
ClCG06G017370 Citrullus lanatus HOM05D011305 ORTHO05D000952 4.6e-09 66.6 147 31.3
FAN14G3845 Fragaria x ananassa HOM05D008426 ORTHO05D022689 4.6e-09 66.6 191 28.3
FvH4_6g05730 Fragaria vesca HOM05D008426 ORTHO05D022689 6.1e-09 66.2 258 28.3
Prupe.3G111400 Prunus persica HOM05D002630 ORTHO05D000952 6.1e-09 66.2 198 25.3
Prupe.6G103600 Prunus persica HOM05D011155 ORTHO05D000952 6.1e-09 66.2 242 27.7
Prupe.8G095200 Prunus persica HOM05D011155 ORTHO05D000952 6.1e-09 66.2 260 28.8
FAN14G1534 Fragaria x ananassa HOM05D008426 ORTHO05D022689 7.9e-09 65.9 258 28.3
FAN27G0121 Fragaria x ananassa HOM05D002630 ORTHO05D000952 7.9e-09 65.9 205 25.4
RcHm_v2.0_Chr3g0454621 Rosa chinensis HOM05D002630 ORTHO05D000952 1.0e-08 65.5 265 26.8
RcHm_v2.0_Chr5g0056721 Rosa chinensis HOM05D002630 ORTHO05D000952 1.0e-08 65.5 193 29.5
FAN15G3021 Fragaria x ananassa HOM05D002630 ORTHO05D000952 1.4e-08 65.1 206 26.2
FAN18G0285 Fragaria x ananassa HOM05D008426 ORTHO05D202383 1.4e-08 65.1 87 52.9
FAN02G4283 Fragaria x ananassa HOM05D008426 ORTHO05D022689 1.8e-08 64.7 252 27.0
FAN05G0031 Fragaria x ananassa HOM05D008426 ORTHO05D022689 2.3e-08 64.3 256 27.7
Ciclev10033744m.g Citrus clementina HOM05D002630 ORTHO05D000952 3.9e-08 63.5 208 28.4
FAN24G3101 Fragaria x ananassa HOM05D002630 ORTHO05D000952 5.1e-08 63.2 274 24.8
Lj5g0002813 Lotus japonicus HOM05D002630 ORTHO05D000952 6.7e-08 62.8 227 26.0
CsaV3_1G009440 Cucumis sativus L. HOM05D011305 ORTHO05D000952 2.0e-07 61.2 156 29.5
Prupe.4G154000 Prunus persica HOM05D002630 ORTHO05D000952 2.0e-07 61.2 264 25.0
MELO3C009236.2 Cucumis melo HOM05D011305 ORTHO05D000952 4.3e-07 60.1 146 32.2
Prupe.4G153700 Prunus persica HOM05D002630 ORTHO05D000952 9.7e-07 58.9 228 26.8
Sed0020793 Sechium edule HOM05D011305 ORTHO05D000952 1.3e-06 58.5 147 29.3
MD11G1219300 Malus domestica HOM05D002630 ORTHO05D000952 2.8e-06 57.4 202 26.7
Prupe.4G151900 Prunus persica HOM05D002630 ORTHO05D000952 2.8e-06 57.4 205 25.9
Pp3c3_2470 Physcomitrium patens HOM05D000010 ORTHO05D000063 6.3e-06 56.2 190 29.5
RcHm_v2.0_Chr7g0239011 Rosa chinensis HOM05D008426 ORTHO05D341220 6.3e-06 56.2 113 40.7
Atru.chr8.1837 Acer truncatum HOM05D002630 ORTHO05D000952 8.2e-06 55.8 94 33.0


User provided reference genes

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