Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN04G3108 Fragaria x ananassa HOM05D002209 ORTHO05D004761 7.2e-116 420.6 218 100.0
FAN08G3349 Fragaria x ananassa HOM05D002209 ORTHO05D004761 3.0e-106 388.7 205 98.0
FvH4_5g17050 Fragaria vesca HOM05D002209 ORTHO05D004761 8.9e-106 387.1 204 97.5
FAN18G1515 Fragaria x ananassa HOM05D002209 ORTHO05D004761 2.6e-105 385.6 204 97.1
FAN13G0599 Fragaria x ananassa HOM05D002209 ORTHO05D004761 1.3e-104 383.3 205 96.6
RcHm_v2.0_Chr7g0178801 Rosa chinensis HOM05D002209 ORTHO05D004761 5.6e-100 367.9 205 91.7
MD00G1160600 Malus domestica HOM05D002209 ORTHO05D004761 1.9e-84 316.2 207 77.3
MD14G1233700 Malus domestica HOM05D002209 ORTHO05D004761 2.8e-83 312.4 207 75.4
Prupe.5G229900 Prunus persica HOM05D002209 ORTHO05D004761 8.1e-83 310.8 207 75.8
COL.COLO4_05870 Corchorus olitorius HOM05D002209 ORTHO05D004761 4.3e-76 288.5 208 70.2
Duzib205G0470 Durio zibethinus HOM05D002209 ORTHO05D004761 1.4e-74 283.5 209 68.4
Manes.06G008500 Manihot esculenta HOM05D002209 ORTHO05D004761 1.4e-74 283.5 211 69.2
Potri.012G049700 Populus trichocarpa HOM05D002209 ORTHO05D004761 1.2e-73 280.4 210 67.1
Potri.015G041700 Populus trichocarpa HOM05D002209 ORTHO05D004761 1.5e-73 280.0 210 67.1
Duzib084G0729 Durio zibethinus HOM05D002209 ORTHO05D004761 2.0e-73 279.6 208 67.8
Thecc.03G048800 Theobroma cacao HOM05D002209 ORTHO05D004761 4.4e-73 278.5 208 68.3
Thhalv10020989m.g Eutrema salsugineum HOM05D002209 ORTHO05D004761 9.9e-73 277.3 207 66.7
Lj9A421T102 Lonicera japonica HOM05D002209 ORTHO05D004761 1.3e-72 276.9 207 69.1
THA.LOC104820369 Tarenaya hassleriana HOM05D002209 ORTHO05D004761 1.3e-72 276.9 220 64.5
GSVIVG01008394001 Vitis vinifera HOM05D002209 ORTHO05D004761 1.3e-72 276.9 210 69.0
Cc04_g06630 Coffea canephora HOM05D002209 ORTHO05D004761 3.8e-72 275.4 209 66.5
PGR083G2774 Punica granatum HOM05D002209 ORTHO05D004761 1.1e-71 273.9 210 68.1
CSS0009925 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 1.9e-71 273.1 206 68.4
CSS0032919 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 1.9e-71 273.1 206 68.4
AL3G31330 Arabidopsis lyrata HOM05D002209 ORTHO05D004761 4.2e-71 271.9 207 65.7
AL1G55300 Arabidopsis lyrata HOM05D002209 ORTHO05D004761 5.4e-71 271.6 207 66.2
AT1G48635 Arabidopsis thaliana HOM05D002209 ORTHO05D004761 9.3e-71 270.8 207 65.2
Dinv24643 Davidia involucrata HOM05D002209 ORTHO05D004761 1.2e-70 270.4 207 66.7
Duzib068G1457 Durio zibethinus HOM05D002209 ORTHO05D004761 1.2e-70 270.4 208 65.9
Gohir.A09G051300 Gossypium hirsutum HOM05D002209 ORTHO05D004761 2.1e-70 269.6 208 66.3
Rhsim07G0079200 Rhododendron simsii HOM05D002209 ORTHO05D004761 2.1e-70 269.6 206 68.0
CARHR093480 Cardamine hirsuta HOM05D002209 ORTHO05D004761 3.5e-70 268.9 207 64.7
Eucgr.B00855 Eucalyptus grandis HOM05D002209 ORTHO05D004761 3.5e-70 268.9 210 65.2
Carub.0001s3778 Capsella rubella HOM05D002209 ORTHO05D004761 7.8e-70 267.7 207 65.2
Gohir.D09G052400 Gossypium hirsutum HOM05D002209 ORTHO05D004761 1.3e-69 266.9 208 65.4
Gorai.006G057200 Gossypium raimondii HOM05D002209 ORTHO05D004761 1.3e-69 266.9 208 65.4
AT3G18160 Arabidopsis thaliana HOM05D002209 ORTHO05D004761 1.7e-69 266.5 207 63.8
CANSAT80G1163 Cannabis sativa HOM05D002209 ORTHO05D004761 2.3e-69 266.2 213 63.8
CANSAT80G2224 Cannabis sativa HOM05D002209 ORTHO05D004761 2.3e-69 266.2 213 63.8
Ciclev10008707m.g Citrus clementina HOM05D002209 ORTHO05D004761 3.9e-69 265.4 207 66.2
Dinv29939 Davidia involucrata HOM05D002209 ORTHO05D004761 5.1e-69 265.0 207 66.2
THA.LOC104821836 Tarenaya hassleriana HOM05D002209 ORTHO05D004761 5.1e-69 265.0 207 66.2
TWI81G0085 Tripterygium wilfordii HOM05D002209 ORTHO05D004761 1.1e-68 263.8 208 62.5
CSS0022680 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 1.5e-68 263.5 210 66.7
BraA01t03699Z Brassica rapa HOM05D002209 ORTHO05D007926 1.9e-68 263.1 210 61.9
Oeu017507.1 Olea europaea HOM05D002209 ORTHO05D004761 3.3e-68 262.3 210 63.8
Peaxi162Scf01127g00030 Petunia axillaris HOM05D002209 ORTHO05D004761 4.3e-68 261.9 209 65.6
Sp3g16270 Schrenkiella parvula HOM05D002209 ORTHO05D004761 4.3e-68 261.9 207 63.8
Carub.0003s1787 Capsella rubella HOM05D002209 ORTHO05D004761 7.3e-68 261.2 207 62.8
Peaxi162Scf00683g00231 Petunia axillaris HOM05D002209 ORTHO05D004761 9.6e-68 260.8 207 64.7
MSTRG.4560 Avicennia marina HOM05D002209 ORTHO05D004761 1.3e-67 260.4 207 64.3
RhsimUnG0064800 Rhododendron simsii HOM05D002209 ORTHO05D004761 1.3e-67 260.4 219 63.9
C01p46070 Brassica napus HOM05D002209 ORTHO05D007926 1.6e-67 260.0 206 63.1
ClCG06G014470 Citrullus lanatus HOM05D002209 ORTHO05D004761 2.8e-67 259.2 208 63.9
CAN.G1129.31 Capsicum annuum HOM05D002209 ORTHO05D004761 3.6e-67 258.8 207 63.8
BcaB04g20791 Brassica carinata HOM05D002209 ORTHO05D004761 4.8e-67 258.5 206 64.1
MELO3C017339.2 Cucumis melo HOM05D002209 ORTHO05D004761 6.2e-67 258.1 208 63.9
BolC1t04568H Brassica oleracea HOM05D002209 ORTHO05D007926 8.1e-67 257.7 207 62.3
BcaC09g48771 Brassica carinata HOM05D002209 ORTHO05D004761 1.4e-66 256.9 206 62.6
Solyc03g119030.4 Solanum lycopersicum HOM05D002209 ORTHO05D004761 1.4e-66 256.9 207 63.8
Atru.chr9.949 Acer truncatum HOM05D002209 ORTHO05D004761 1.8e-66 256.5 210 63.3
Hma1.2p1_0669F.1_g200340 Hydrangea macrophylla HOM05D002209 ORTHO05D004761 4.0e-66 255.4 209 63.2
Sopen03g037920 Solanum pennellii HOM05D002209 ORTHO05D004761 4.0e-66 255.4 207 63.3
PGSC0003DMG402005658 Solanum tuberosum HOM05D002209 ORTHO05D004761 5.3e-66 255.0 207 63.3
Sed0007305 Sechium edule HOM05D002209 ORTHO05D004761 6.9e-66 254.6 208 63.5
CsaV3_1G004130 Cucumis sativus L. HOM05D002209 ORTHO05D004761 9.0e-66 254.2 208 62.5
ECA246G4025 Erigeron canadensis HOM05D002209 ORTHO05D004761 9.0e-66 254.2 209 64.1
SalBow1G1036 Salvia bowleyana HOM05D002209 ORTHO05D004761 1.5e-65 253.4 211 62.1
Sp1g35610 Schrenkiella parvula HOM05D002209 ORTHO05D004761 1.5e-65 253.4 208 62.0
Sed0027899 Sechium edule HOM05D002209 ORTHO05D004761 1.5e-65 253.4 210 60.5
CiPaw.16G090800 Carya illinoinensis HOM05D002209 ORTHO05D004761 2.6e-65 252.7 210 62.9
CARHR038280 Cardamine hirsuta HOM05D002209 ORTHO05D004761 3.4e-65 252.3 207 62.3
Aa31LG8G4990 Aethionema arabicum HOM05D002209 ORTHO05D004761 4.5e-65 251.9 207 62.8
MSTRG.9285 Avicennia marina HOM05D002209 ORTHO05D004761 5.8e-65 251.5 207 62.3
C06p03290 Brassica napus HOM05D002209 ORTHO05D004761 9.9e-65 250.8 208 62.5
Lsat_1_v5_gn_3_1001 Lactuca sativa HOM05D002209 ORTHO05D004761 1.7e-64 250.0 209 63.2
BcaC08g43072 Brassica carinata HOM05D002209 ORTHO05D004761 2.9e-64 249.2 208 62.0
Aa31LG10G5170 Aethionema arabicum HOM05D003754 ORTHO05D004530 4.9e-64 248.4 205 61.0
BolC3t17231H Brassica oleracea HOM05D002209 ORTHO05D004761 4.9e-64 248.4 206 61.2
BcaB07g33725 Brassica carinata HOM05D002209 ORTHO05D004761 6.4e-64 248.1 208 62.0
BcaB04g18980 Brassica carinata HOM05D002209 ORTHO05D004761 1.1e-63 247.3 208 61.1
BraA03t13213Z Brassica rapa HOM05D002209 ORTHO05D004761 1.1e-63 247.3 206 61.2
Nitab4.5_0001158g0020 Nicotiana tabacum HOM05D002209 ORTHO05D004761 1.1e-63 247.3 207 61.8
C03p49370 Brassica napus HOM05D002209 ORTHO05D004761 1.4e-63 246.9 206 61.2
Nn3g18057 Nelumbo nucifera HOM05D002209 ORTHO05D004761 1.4e-63 246.9 212 60.8
PSO782G2563 Papaver somniferum HOM05D002209 ORTHO05D004761 1.4e-63 246.9 210 59.5
A06p04280 Brassica napus HOM05D002209 ORTHO05D004761 1.9e-63 246.5 209 60.8
TPR.G12929 Trifolium pratense HOM05D002209 ORTHO05D004761 2.4e-63 246.1 211 61.1
A03p40560 Brassica napus HOM05D002209 ORTHO05D004761 5.4e-63 245.0 206 60.7
Thhalv10011573m.g Eutrema salsugineum HOM05D002209 ORTHO05D004761 7.1e-63 244.6 221 58.8
Sc12g0007380 Simmondsia chinensis HOM05D002209 ORTHO05D004761 7.1e-63 244.6 205 60.5
DCAR_011382 Daucus carota HOM05D002209 ORTHO05D004761 9.3e-63 244.2 205 62.0
Lalb_Chr16g0387141 Lupinus albus HOM05D002209 ORTHO05D004761 9.3e-63 244.2 210 59.0
Lj4g0012439 Lotus japonicus HOM05D002209 ORTHO05D004761 1.6e-62 243.4 210 58.6
Aqoxy3G03975 Aquilegia oxysepala HOM05D002209 ORTHO05D004761 2.1e-62 243.0 208 61.1
Glyma.05G243700 Glycine max HOM05D002209 ORTHO05D004761 3.5e-62 242.3 210 61.0
HanXRQChr05g0144521 Helianthus annuus HOM05D002209 ORTHO05D004761 3.5e-62 242.3 208 60.6
Nitab4.5_0012369g0030 Nicotiana tabacum HOM05D002209 ORTHO05D004761 3.5e-62 242.3 222 58.1
Sopen12g020100 Solanum pennellii HOM05D002209 ORTHO05D004761 3.5e-62 242.3 207 60.4
Solyc12g040500.2 Solanum lycopersicum HOM05D002209 ORTHO05D004761 4.6e-62 241.9 207 60.4
Ca_17220_v3 Cicer arietinum L. HOM05D002209 ORTHO05D004761 1.3e-61 240.4 212 59.4
Lalb_Chr09g0330521 Lupinus albus HOM05D002209 ORTHO05D004761 3.0e-61 239.2 210 58.6
Nn4g24077 Nelumbo nucifera HOM05D002209 ORTHO05D004761 3.9e-61 238.8 208 59.6
Glyma.08G051500 Glycine max HOM05D002209 ORTHO05D004761 5.1e-61 238.4 210 60.0
MBI10_g07297_MAGBIO Magnolia biondii HOM05D002209 ORTHO05D004761 5.1e-61 238.4 208 57.2
Medtr8g106780 Medicago truncatula HOM05D002209 ORTHO05D004761 8.7e-61 237.7 211 58.8
PSO063G7528 Papaver somniferum HOM05D002209 ORTHO05D004761 1.1e-60 237.3 204 59.3
Phvul.002G327400 Phaseolus vulgaris HOM05D002209 ORTHO05D004761 2.5e-60 236.1 210 59.0
VMungo0251G1482 Vigna mungo HOM05D002209 ORTHO05D004761 2.5e-60 236.1 210 58.6
Lalb_Chr05g0221871 Lupinus albus HOM05D002209 ORTHO05D004761 3.3e-60 235.7 210 57.1
BolC6t35461H Brassica oleracea HOM05D002209 ORTHO05D004761 5.6e-60 235.0 241 54.4
BraA06t23631Z Brassica rapa HOM05D002209 ORTHO05D004761 8.1e-59 231.1 245 52.7
SHI19025 Sapria himalayana HOM05D002209 ORTHO05D000001 3.1e-58 229.2 211 54.5
arahy.Tifrunner.gnm1.ann1.6WJC3X Arachis hypogaea HOM05D002209 ORTHO05D004761 4.0e-58 228.8 257 49.8
EL10Ac8g19603 Beta vulgaris HOM05D002209 ORTHO05D004761 2.6e-57 226.1 241 51.5
BcaC01g03707 Brassica carinata HOM05D002209 ORTHO05D004761 4.5e-57 225.3 207 57.0
Migut.D01447 Erythranthe guttata HOM05D002209 ORTHO05D004761 4.5e-57 225.3 207 56.5
CDE02G4061 Ceratophyllum demersum HOM05D002209 ORTHO05D004761 2.2e-56 223.0 211 56.4
Nitab4.5_0000150g0110 Nicotiana tabacum HOM05D002209 ORTHO05D004761 5.5e-55 218.4 228 53.9
Hund22655 Selenicereus undatus HOM05D002209 ORTHO05D004761 7.1e-55 218.0 199 57.8
CSS0012524 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 2.1e-54 216.5 160 70.6
Sabra15G0063000 Salix brachista HOM05D002209 ORTHO05D004761 1.8e-53 213.4 326 41.1
Actinidia35110 Actinidia chinensis HOM05D002209 ORTHO05D004761 8.7e-53 211.1 161 67.1
CSS0005213 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 8.7e-53 211.1 160 69.4
Gorai.007G186700 Gossypium raimondii HOM05D002209 ORTHO05D004761 4.3e-52 208.8 176 63.1
vmacro16528 Vaccinium macrocarpon HOM05D002209 ORTHO05D004761 7.4e-52 208.0 206 55.8
Gohir.D08G140100 Gossypium hirsutum HOM05D002209 ORTHO05D004761 9.6e-52 207.6 176 63.1
HPP92_008203 Vanilla planifolia HOM05D002209 ORTHO05D004761 1.6e-51 206.8 208 51.0
Hma1.2p1_0669F.1_g200330 Hydrangea macrophylla HOM05D002209 ORTHO05D004761 2.8e-51 206.1 166 64.5
Gorai.008G042300 Gossypium raimondii HOM05D002209 ORTHO05D004761 4.8e-51 205.3 176 62.5
Nitab4.5_0012395g0010 Nicotiana tabacum HOM05D002209 ORTHO05D004761 1.1e-50 204.1 175 62.9
Sabra15G0055400 Salix brachista HOM05D002209 ORTHO05D004761 1.4e-50 203.8 348 38.2
Gorai.004G122400 Gossypium raimondii HOM05D002209 ORTHO05D004761 4.0e-50 202.2 170 63.5
Haze_18790 Corylus avellana HOM05D002209 ORTHO05D004761 6.9e-50 201.4 178 63.5
TAR629G1642 Trochodendron aralioides HOM05D002209 ORTHO05D004761 1.3e-48 197.2 153 66.7
Cpa.g.sc3.426 Carica papaya HOM05D002209 ORTHO05D004761 4.9e-48 195.3 150 66.0
A01p36240 Brassica napus HOM05D002209 ORTHO05D007926 1.9e-47 193.4 152 63.2
MBI16_g47222_MAGBIO Magnolia biondii HOM05D002209 ORTHO05D004761 7.1e-47 191.4 208 50.5
TAR622G1360 Trochodendron aralioides HOM05D002209 ORTHO05D004761 6.0e-46 188.3 153 65.4
PGSC0003DMG400015821 Solanum tuberosum HOM05D002209 ORTHO05D004761 7.9e-46 188.0 154 63.0
Gohir.D13G126266 Gossypium hirsutum HOM05D002209 ORTHO05D004761 1.8e-45 186.8 176 59.1
Psat7g003880 Pisum sativum HOM05D002209 ORTHO05D004761 4.3e-44 182.2 154 61.7
AUR62002654 Chenopodium quinoa HOM05D002209 ORTHO05D004761 5.9e-41 171.8 148 60.8
SGA_v2.0_scaffold171G38932 Striga asiatica HOM05D002209 ORTHO05D004761 4.8e-35 152.1 315 34.6
CSS0050298 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 2.4e-34 149.8 151 56.3
CSS0034654 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 3.4e-33 146.0 106 72.6
Gorai.008G062000 Gossypium raimondii HOM05D002209 ORTHO05D004761 1.9e-31 140.2 128 58.6
CAN.G197.13 Capsicum annuum HOM05D002209 ORTHO05D004761 3.2e-31 139.4 124 58.9
Mapoly0003s0191 Marchantia polymorpha HOM05D002209 ORTHO05D004761 5.5e-31 138.7 224 35.7
SEGI_04696 Sequoiadendron giganteum HOM05D002209 ORTHO05D004761 9.4e-31 137.9 166 45.2
AagrBONN_evm.TU.Sc2ySwM_344.1865 Anthoceros agrestis HOM05D002209 ORTHO05D004761 1.6e-30 137.1 211 37.4
SEGI_01637 Sequoiadendron giganteum HOM05D002209 ORTHO05D004761 1.6e-30 137.1 169 45.6
MBI16_g47372_MAGBIO Magnolia biondii HOM05D002209 ORTHO05D004761 3.6e-30 136.0 130 58.5
Zm00001eb098030 Zea mays HOM05D002209 ORTHO05D004761 2.0e-28 130.2 152 44.1
Pp3c24_12050 Physcomitrium patens HOM05D002209 ORTHO05D004761 1.7e-27 127.1 214 36.4
CBR_g38112 Chara braunii HOM05D002209 ORTHO05D004761 6.3e-27 125.2 210 33.3
Pp3c8_16550 Physcomitrium patens HOM05D002209 ORTHO05D004761 5.3e-26 122.1 217 37.8
Os09g0314300 Oryza sativa ssp. japonica HOM05D002209 ORTHO05D004761 2.0e-25 120.2 135 43.0
SMO367G0254 Selaginella moellendorffii HOM05D002209 ORTHO05D004761 7.7e-25 118.2 213 34.3
Pp3c20_5170 Physcomitrium patens HOM05D002209 ORTHO05D004761 5.0e-24 115.5 216 32.9
CSS0016222 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 5.5e-23 112.1 99 62.6
Psat0s3278g0200 Pisum sativum HOM05D002209 ORTHO05D004761 5.5e-23 112.1 187 42.2
AUR62040790 Chenopodium quinoa HOM05D002209 ORTHO05D004761 5.3e-18 95.5 148 40.5
PRCOL_00001207 Prasinoderma coloniale HOM05D006727 ORTHO05D008408 1.7e-16 90.5 194 29.9
AagrBONN_evm.TU.Sc2ySwM_368.2096 Anthoceros agrestis HOM05D002209 ORTHO05D004761 1.2e-12 77.8 142 34.5
CSS0038011 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 3.1e-10 69.7 57 56.1
CSS0040553 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 3.1e-10 69.7 57 56.1
QL10p027517 Quercus lobata HOM05D002209 ORTHO05D004761 3.8e-08 62.8 50 56.0
unitig_0.g802 Utricularia gibba HOM05D002209 ORTHO05D004761 1.1e-07 61.2 43 60.5


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