Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN04G3079 Fragaria x ananassa HOM05D006385 ORTHO05D007948 1.1e-33 146.0 72 100.0
FAN04G3219 Fragaria x ananassa HOM05D006385 ORTHO05D007948 1.1e-33 146.0 72 100.0
FvH4_5g36620 Fragaria vesca HOM05D006385 ORTHO05D007948 2.1e-27 125.2 63 96.8
FAN04G2124 Fragaria x ananassa HOM05D006385 ORTHO05D007948 2.1e-27 125.2 63 96.8
FAN08G3484 Fragaria x ananassa HOM05D000076 ORTHO05D002730 4.6e-27 124.0 63 95.2
RcHm_v2.0_Chr7g0242391 Rosa chinensis HOM05D006385 ORTHO05D007948 7.9e-27 123.2 63 95.2
FAN04G2677 Fragaria x ananassa HOM05D006385 ORTHO05D007948 3.0e-26 121.3 63 95.2
Manes.18G064300 Manihot esculenta HOM05D006385 ORTHO05D007948 8.7e-26 119.8 63 92.1
Aqoxy3G02613 Aquilegia oxysepala HOM05D006385 ORTHO05D007948 2.5e-25 118.2 63 88.9
Lalb_Chr17g0344281 Lupinus albus HOM05D006385 ORTHO05D007948 2.5e-25 118.2 66 84.8
Glyma.14G177200 Glycine max HOM05D006385 ORTHO05D007948 3.3e-25 117.9 66 84.8
MD15G1373900 Malus domestica HOM05D006385 ORTHO05D007948 3.3e-25 117.9 65 87.7
Prupe.1G522500 Prunus persica HOM05D006385 ORTHO05D007948 3.3e-25 117.9 66 83.3
RcHm_v2.0_Chr7g0242491 Rosa chinensis HOM05D006385 ORTHO05D007948 3.3e-25 117.9 63 92.1
TAR629G0260 Trochodendron aralioides HOM05D006385 ORTHO05D007948 4.3e-25 117.5 63 85.7
Medtr5g064610 Medicago truncatula HOM05D006385 ORTHO05D007948 9.6e-25 116.3 66 83.3
Phvul.008G176700 Phaseolus vulgaris HOM05D006385 ORTHO05D007948 9.6e-25 116.3 66 83.3
TWI56G0191 Tripterygium wilfordii HOM05D006385 ORTHO05D007948 9.6e-25 116.3 63 88.9
VMungo0647G2510 Vigna mungo HOM05D006385 ORTHO05D007948 9.6e-25 116.3 66 83.3
CSS0041418 Camellia sinensis var. sinensis HOM05D006385 ORTHO05D007948 1.3e-24 115.9 63 87.3
CiPaw.16G033200 Carya illinoinensis HOM05D006385 ORTHO05D007948 1.3e-24 115.9 63 87.3
Carub.0006s2759 Capsella rubella HOM05D006385 ORTHO05D007948 1.6e-24 115.5 66 83.3
AUR62018967 Chenopodium quinoa HOM05D006385 ORTHO05D007948 1.6e-24 115.5 63 88.9
AUR62027809 Chenopodium quinoa HOM05D006385 ORTHO05D007948 1.6e-24 115.5 63 88.9
Ciclev10001685m.g Citrus clementina HOM05D006385 ORTHO05D007948 1.6e-24 115.5 66 83.3
Eucgr.F00373 Eucalyptus grandis HOM05D006385 ORTHO05D007948 1.6e-24 115.5 63 87.3
Glyma.02G209000 Glycine max HOM05D006385 ORTHO05D007948 1.6e-24 115.5 66 83.3
Hma1.2p1_0593F.1_g185660 Hydrangea macrophylla HOM05D006385 ORTHO05D007948 1.6e-24 115.5 63 87.3
Potri.005G161900 Populus trichocarpa HOM05D006385 ORTHO05D007948 1.6e-24 115.5 63 85.7
Sopen04g029620 Solanum pennellii HOM05D006385 ORTHO05D007948 1.6e-24 115.5 63 87.3
PGSC0003DMG400030834 Solanum tuberosum HOM05D006385 ORTHO05D007948 1.6e-24 115.5 63 87.3
GSVIVG01009079001 Vitis vinifera HOM05D006385 ORTHO05D007948 1.6e-24 115.5 63 85.7
Atru.chr13.1121 Acer truncatum HOM05D006385 ORTHO05D007948 2.1e-24 115.2 63 87.3
AL6G41510 Arabidopsis lyrata HOM05D006385 ORTHO05D007948 2.1e-24 115.2 66 81.8
Lj1g0021451 Lotus japonicus HOM05D006385 ORTHO05D007948 2.1e-24 115.2 66 81.8
QL02p002481 Quercus lobata HOM05D006385 ORTHO05D007948 2.1e-24 115.2 63 87.3
unitig_578.g16554 Utricularia gibba HOM05D006385 ORTHO05D007948 2.1e-24 115.2 63 87.3
Nitab4.5_0010488g0040 Nicotiana tabacum HOM05D006385 ORTHO05D007948 2.8e-24 114.8 63 87.3
Thecc.08G102700 Theobroma cacao HOM05D006385 ORTHO05D007948 2.8e-24 114.8 63 87.3
AT4G09010 Arabidopsis thaliana HOM05D006385 ORTHO05D007948 3.7e-24 114.4 66 83.3
CSS0028326 Camellia sinensis var. sinensis HOM05D006385 ORTHO05D007948 3.7e-24 114.4 66 80.3
Cc10_g06720 Coffea canephora HOM05D006385 ORTHO05D007948 3.7e-24 114.4 66 80.3
DCAR_012886 Daucus carota HOM05D006385 ORTHO05D007948 3.7e-24 114.4 63 87.3
Sc23g0000390 Simmondsia chinensis HOM05D006385 ORTHO05D007948 3.7e-24 114.4 63 85.7
CAN.G857.10 Capsicum annuum HOM05D006385 ORTHO05D007948 4.8e-24 114.0 63 85.7
SGA_v2.0_scaffold69G23149 Striga asiatica HOM05D006385 ORTHO05D007948 4.8e-24 114.0 64 82.8
TPR.G31376 Trifolium pratense HOM05D006385 ORTHO05D007948 4.8e-24 114.0 66 81.8
vmacro04711 Vaccinium macrocarpon HOM05D006385 ORTHO05D007948 6.2e-24 113.6 62 87.1
ClCG11G014260 Citrullus lanatus HOM05D006385 ORTHO05D007948 8.2e-24 113.2 63 84.1
Sabra05G0122400 Salix brachista HOM05D000076 ORTHO05D007948 8.2e-24 113.2 63 84.1
Migut.C00083 Erythranthe guttata HOM05D006385 ORTHO05D007948 1.1e-23 112.8 63 85.7
Nn3g19220 Nelumbo nucifera HOM05D006385 ORTHO05D007948 1.1e-23 112.8 63 84.1
Rhsim07G0205000 Rhododendron simsii HOM05D006385 ORTHO05D007948 1.1e-23 112.8 65 78.5
CARHR260020 Cardamine hirsuta HOM05D006385 ORTHO05D007948 1.4e-23 112.5 66 80.3
Haze_18272 Corylus avellana HOM05D006385 ORTHO05D007948 1.4e-23 112.5 65 78.5
Haze_18276 Corylus avellana HOM05D006385 ORTHO05D007948 1.4e-23 112.5 65 78.5
PSO063G4930 Papaver somniferum HOM05D006385 ORTHO05D007948 1.4e-23 112.5 63 84.1
Ca_05312_v3 Cicer arietinum L. HOM05D006385 ORTHO05D007948 1.8e-23 112.1 66 77.3
PGR042G2954 Punica granatum HOM05D006385 ORTHO05D007948 1.8e-23 112.1 63 84.1
CANSAT25G3491 Cannabis sativa HOM05D006385 ORTHO05D007948 2.4e-23 111.7 63 82.5
Cfa017889 Carpinus fangiana HOM05D006385 ORTHO05D007948 2.4e-23 111.7 63 82.5
Sed0018010 Sechium edule HOM05D006385 ORTHO05D007948 2.4e-23 111.7 63 82.5
THA.LOC104813110 Tarenaya hassleriana HOM05D006385 ORTHO05D007948 2.4e-23 111.7 63 84.1
Peaxi162Scf00030g02222 Petunia axillaris HOM05D006385 ORTHO05D007948 4.0e-23 110.9 63 84.1
SalBow7G0771 Salvia bowleyana HOM05D006385 ORTHO05D007948 4.0e-23 110.9 63 79.4
Solyc04g074640.4 Solanum lycopersicum HOM05D006385 ORTHO05D007948 4.0e-23 110.9 63 82.5
Duzib093G1818 Durio zibethinus HOM05D006385 ORTHO05D007948 5.3e-23 110.5 63 82.5
Aa31LG9G14680 Aethionema arabicum HOM05D006385 ORTHO05D007948 6.9e-23 110.2 63 81.0
BcaC01g04743 Brassica carinata HOM05D006385 ORTHO05D007948 6.9e-23 110.2 63 82.5
A03p28350 Brassica napus HOM05D006385 ORTHO05D007948 6.9e-23 110.2 63 82.5
C03p34260 Brassica napus HOM05D006385 ORTHO05D007948 6.9e-23 110.2 63 82.5
BolC3t15735H Brassica oleracea HOM05D006385 ORTHO05D007948 6.9e-23 110.2 63 82.5
BraA03t12039Z Brassica rapa HOM05D006385 ORTHO05D007948 6.9e-23 110.2 63 82.5
COL.COLO4_12014 Corchorus olitorius HOM05D006385 ORTHO05D007948 6.9e-23 110.2 66 80.3
CsaV3_3G047650 Cucumis sativus L. HOM05D006385 ORTHO05D007948 6.9e-23 110.2 63 81.0
Thhalv10028739m.g Eutrema salsugineum HOM05D006385 ORTHO05D007948 6.9e-23 110.2 63 82.5
Gorai.010G038200 Gossypium raimondii HOM05D006385 ORTHO05D007948 6.9e-23 110.2 63 81.0
PSO782G1429 Papaver somniferum HOM05D006385 ORTHO05D007948 6.9e-23 110.2 63 82.5
QL02p002520 Quercus lobata HOM05D006385 ORTHO05D007948 6.9e-23 110.2 63 84.1
Sp6g08630 Schrenkiella parvula HOM05D006385 ORTHO05D007948 6.9e-23 110.2 63 82.5
Actinidia33123 Actinidia chinensis HOM05D006385 ORTHO05D007948 1.2e-22 109.4 63 81.0
Actinidia37405 Actinidia chinensis HOM05D006385 ORTHO05D007948 1.2e-22 109.4 63 81.0
MSTRG.24988 Avicennia marina HOM05D006385 ORTHO05D007948 1.2e-22 109.4 63 82.5
EL10Ac1g01150 Beta vulgaris HOM05D006385 ORTHO05D007948 1.2e-22 109.4 63 84.1
Ah.05g169700 Amaranthus hybridus HOM05D006385 ORTHO05D007948 1.5e-22 109.0 63 84.1
BcaB01g02829 Brassica carinata HOM05D006385 ORTHO05D007948 1.5e-22 109.0 63 82.5
CDE11G0329 Ceratophyllum demersum HOM05D006385 ORTHO05D007948 2.0e-22 108.6 63 81.0
Lsat_1_v5_gn_1_3240 Lactuca sativa HOM05D006385 ORTHO05D007948 2.0e-22 108.6 63 81.0
Lj4A97T74 Lonicera japonica HOM05D006385 ORTHO05D007948 2.0e-22 108.6 63 81.0
ECA247G1006 Erigeron canadensis HOM05D006385 ORTHO05D007948 2.6e-22 108.2 63 81.0
HanXRQChr05g0149631 Helianthus annuus HOM05D006385 ORTHO05D007948 2.6e-22 108.2 63 79.4
ATR0829G184 Amborella trichopoda HOM05D006385 ORTHO05D007948 3.4e-22 107.8 63 77.8
Gohir.A06G033800 Gossypium hirsutum HOM05D006385 ORTHO05D007948 4.5e-22 107.5 63 79.4
arahy.Tifrunner.gnm1.ann1.5I6DN4 Arachis hypogaea HOM05D006385 ORTHO05D007948 5.8e-22 107.1 66 77.3
arahy.Tifrunner.gnm1.ann1.A6MVZL Arachis hypogaea HOM05D006385 ORTHO05D007948 5.8e-22 107.1 66 77.3
Gohir.D06G034700 Gossypium hirsutum HOM05D006385 ORTHO05D007948 2.2e-21 105.1 63 79.4
CSS0032215 Camellia sinensis var. sinensis HOM05D006385 ORTHO05D007948 5.0e-21 104.0 66 77.3
HPP92_021090 Vanilla planifolia HOM05D006385 ORTHO05D007948 1.4e-20 102.4 63 76.2
Nitab4.5_0000786g0090 Nicotiana tabacum HOM05D006385 ORTHO05D007948 4.2e-20 100.9 53 90.6
vmacro04724 Vaccinium macrocarpon HOM05D006385 ORTHO05D007948 5.5e-20 100.5 68 73.5
Zm00001eb071800 Zea mays HOM05D006385 ORTHO05D007948 7.1e-20 100.1 63 76.2
Hund16889 Selenicereus undatus HOM05D006385 ORTHO05D007948 9.3e-20 99.8 77 67.5
Pp3c1_18860 Physcomitrium patens HOM05D006385 ORTHO05D007948 2.7e-19 98.2 66 68.2
CBR_g39625 Chara braunii HOM05D006385 ORTHO05D007948 3.5e-19 97.8 62 74.2
Os04g0602100 Oryza sativa ssp. japonica HOM05D006385 ORTHO05D007948 6.1e-19 97.1 63 74.6
Oeu029745.1 Olea europaea HOM05D006385 ORTHO05D007948 1.3e-18 95.9 80 63.8
Pp3c2_15430 Physcomitrium patens HOM05D006385 ORTHO05D007948 2.3e-18 95.1 66 65.2
Mapoly0019s0014 Marchantia polymorpha HOM05D006385 ORTHO05D007948 1.4e-15 85.9 66 59.1
SMO331G0009 Selaginella moellendorffii HOM05D006385 ORTHO05D007948 1.2e-14 82.8 64 62.5
Dinv44802 Davidia involucrata HOM05D006385 ORTHO05D007948 5.9e-14 80.5 46 80.4
AagrBONN_evm.TU.Sc2ySwM_368.1614 Anthoceros agrestis HOM05D006385 ORTHO05D007948 1.0e-13 79.7 66 54.5
Cpa.g.sc36.176 Carica papaya HOM05D006385 ORTHO05D007948 2.2e-08 62.0 44 65.9
SGA_v2.0_scaffold105G30294 Striga asiatica HOM05D006385 ORTHO05D007948 3.7e-08 61.2 40 67.5


User provided reference genes

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