Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN04G2965 Fragaria x ananassa HOM05D007324 ORTHO05D007884 1.9e-41 172.6 118 100.0
FvH4_5g21830 Fragaria vesca HOM05D007324 ORTHO05D007884 8.6e-39 163.7 118 91.5
FAN18G2652 Fragaria x ananassa HOM05D007324 ORTHO05D007884 7.3e-38 160.6 118 91.5
FAN08G0008 Fragaria x ananassa HOM05D007324 ORTHO05D007884 1.1e-36 156.8 118 92.4
FAN13G0501 Fragaria x ananassa HOM05D007324 ORTHO05D007884 1.6e-32 142.9 148 60.1
Haze_08257 Corylus avellana HOM05D007324 ORTHO05D007884 2.5e-14 82.4 87 60.9
PSO478G0244 Papaver somniferum HOM05D007324 ORTHO05D007884 2.1e-13 79.3 86 54.7
Actinidia14815 Actinidia chinensis HOM05D007324 ORTHO05D007884 3.7e-13 78.6 84 56.0
arahy.Tifrunner.gnm1.ann1.0E68DR Arachis hypogaea HOM05D007324 ORTHO05D007884 1.4e-12 76.6 87 52.9
arahy.Tifrunner.gnm1.ann1.69TWVD Arachis hypogaea HOM05D007324 ORTHO05D007884 1.4e-12 76.6 87 52.9
PSO782G2910 Papaver somniferum HOM05D007324 ORTHO05D007884 1.4e-12 76.6 86 53.5
Glyma.05G112000 Glycine max HOM05D007324 ORTHO05D007884 1.8e-12 76.3 87 49.4
Glyma.17G155000 Glycine max HOM05D007324 ORTHO05D007884 2.4e-12 75.9 86 50.0
Gohir.A08G157700 Gossypium hirsutum HOM05D007324 ORTHO05D007884 2.4e-12 75.9 90 50.0
Gohir.D08G178000 Gossypium hirsutum HOM05D007324 ORTHO05D007884 4.0e-12 75.1 90 48.9
Gorai.004G186200 Gossypium raimondii HOM05D007324 ORTHO05D007884 4.0e-12 75.1 90 48.9
CiPaw.11G092000 Carya illinoinensis HOM05D007324 ORTHO05D007884 5.3e-12 74.7 80 57.5
Lj2A242T77 Lonicera japonica HOM05D007324 ORTHO05D007884 5.3e-12 74.7 94 50.0
Ciclev10033018m.g Citrus clementina HOM05D007324 ORTHO05D007884 6.9e-12 74.3 80 53.8
Eucgr.E00290 Eucalyptus grandis HOM05D007324 ORTHO05D007884 6.9e-12 74.3 89 52.8
PGR042G1904 Punica granatum HOM05D007324 ORTHO05D007884 9.0e-12 73.9 87 48.3
Phvul.003G230300 Phaseolus vulgaris HOM05D007324 ORTHO05D007884 2.0e-11 72.8 87 50.6
Sopen06g021310 Solanum pennellii HOM05D007324 ORTHO05D007884 2.0e-11 72.8 89 48.3
A08p09020 Brassica napus HOM05D007324 ORTHO05D007884 2.6e-11 72.4 79 54.4
BraA08t32903Z Brassica rapa HOM05D007324 ORTHO05D007884 2.6e-11 72.4 79 54.4
PSO782G1330 Papaver somniferum HOM05D007324 ORTHO05D007884 2.6e-11 72.4 85 51.8
Atru.chr6.1738 Acer truncatum HOM05D007324 ORTHO05D007884 4.5e-11 71.6 77 51.9
Solyc06g061110.2 Solanum lycopersicum HOM05D007324 ORTHO05D007884 4.5e-11 71.6 91 48.4
Psat4g078840 Pisum sativum HOM05D007324 ORTHO05D007884 5.8e-11 71.2 85 57.6
CDE12G0317 Ceratophyllum demersum HOM05D007324 ORTHO05D007884 1.7e-10 69.7 114 37.7
MD06G1032700 Malus domestica HOM05D007324 ORTHO05D007884 2.2e-10 69.3 70 54.3
Medtr4g098480 Medicago truncatula HOM05D007324 ORTHO05D007884 2.2e-10 69.3 86 51.2
PGSC0003DMG400002093 Solanum tuberosum HOM05D007324 ORTHO05D007884 2.9e-10 68.9 86 51.2
CAN.G201.20 Capsicum annuum HOM05D007324 ORTHO05D007884 3.8e-10 68.6 86 54.7
BolC8t47935H Brassica oleracea HOM05D007324 ORTHO05D007884 4.9e-10 68.2 79 51.9
CSS0048146 Camellia sinensis var. sinensis HOM05D007324 ORTHO05D007884 4.9e-10 68.2 87 49.4
Lalb_Chr16g0386011 Lupinus albus HOM05D007324 ORTHO05D007884 8.4e-10 67.4 74 52.7
Thhalv10009848m.g Eutrema salsugineum HOM05D007324 ORTHO05D007884 1.1e-09 67.0 116 42.2
HanXRQChr03g0084061 Helianthus annuus HOM05D007324 ORTHO05D007884 3.2e-09 65.5 91 47.3
Cfa012419 Carpinus fangiana HOM05D007324 ORTHO05D007884 4.2e-09 65.1 85 54.1
Migut.E01386 Erythranthe guttata HOM05D007324 ORTHO05D007884 5.5e-09 64.7 88 42.0
BcaB07g32955 Brassica carinata HOM05D007324 ORTHO05D007884 9.3e-09 63.9 115 46.1
CSS0008196 Camellia sinensis var. sinensis HOM05D007324 ORTHO05D007884 9.3e-09 63.9 87 47.1
CsaV3_3G001850 Cucumis sativus L. HOM05D007324 ORTHO05D007884 9.3e-09 63.9 112 38.4
Ah.07g200240 Amaranthus hybridus HOM05D007324 ORTHO05D007884 1.2e-08 63.5 87 49.4
ECA240G0465 Erigeron canadensis HOM05D007324 ORTHO05D007884 1.2e-08 63.5 83 47.0
Manes.15G168800 Manihot esculenta HOM05D007324 ORTHO05D007884 1.6e-08 63.2 74 48.6
TWI81G0167 Tripterygium wilfordii HOM05D007324 ORTHO05D007884 1.6e-08 63.2 74 50.0
Prupe.5G039300 Prunus persica HOM05D007324 ORTHO05D007884 2.7e-08 62.4 106 40.6
Lsat_1_v5_gn_6_78560 Lactuca sativa HOM05D007324 ORTHO05D007884 4.6e-08 61.6 91 45.1
Oeu047787.1 Olea europaea HOM05D007324 ORTHO05D007884 4.6e-08 61.6 87 43.7
BolC5t31929H Brassica oleracea HOM05D007324 ORTHO05D007884 1.3e-07 60.1 79 50.6
BcaB04g17953 Brassica carinata HOM05D007324 ORTHO05D007884 1.8e-07 59.7 79 46.8
HanXRQChr02g0043531 Helianthus annuus HOM05D007324 ORTHO05D007884 1.8e-07 59.7 85 43.5
MELO3C032260.2 Cucumis melo HOM05D007324 ORTHO05D007884 6.7e-07 57.8 126 35.7
C05p32030 Brassica napus HOM05D007324 ORTHO05D007884 1.9e-06 56.2 79 49.4
Lj4g0022663 Lotus japonicus HOM05D007324 ORTHO05D007884 1.9e-06 56.2 87 49.4
Nn6g33613 Nelumbo nucifera HOM05D007324 ORTHO05D007884 2.5e-06 55.8 80 50.0
C05p32110 Brassica napus HOM05D007324 ORTHO05D007884 3.3e-06 55.5 79 46.8
BolC5t31940H Brassica oleracea HOM05D007324 ORTHO05D007884 3.3e-06 55.5 79 46.8
ClCG10G001740 Citrullus lanatus HOM05D007324 ORTHO05D007884 3.3e-06 55.5 73 47.9
Cpa.g.sc18.65 Carica papaya HOM05D007324 ORTHO05D007884 4.3e-06 55.1 64 51.6
MBI04_g22943_MAGBIO Magnolia biondii HOM05D007324 ORTHO05D007884 4.3e-06 55.1 85 42.4
Aa31LG2G13400 Aethionema arabicum HOM05D007324 ORTHO05D007884 5.6e-06 54.7 86 47.7
CARHR129450 Cardamine hirsuta HOM05D011082 ORTHO05D007884 5.6e-06 54.7 79 45.6
SGA_v2.0_scaffold144G35830 Striga asiatica HOM05D007324 ORTHO05D007884 9.6e-06 53.9 71 42.3


User provided reference genes

Program Settings