Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN04G2785 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.8e-210 734.9 346 100.0
FAN08G0813 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.6e-189 666.0 401 81.3
FAN18G3544 Fragaria x ananassa HOM05D006368 ORTHO05D006739 5.0e-188 661.0 401 80.8
FAN13G2475 Fragaria x ananassa HOM05D006368 ORTHO05D006739 9.5e-187 656.8 403 80.1
FvH4_5g02330 Fragaria vesca HOM05D006368 ORTHO05D006739 1.3e-180 636.3 375 82.9
RcHm_v2.0_Chr7g0197821 Rosa chinensis HOM05D006368 ORTHO05D006739 3.7e-122 442.2 342 64.0
RcHm_v2.0_Chr2g0153831 Rosa chinensis HOM05D006368 ORTHO05D006739 1.1e-54 218.0 401 36.7
FAN02G0373 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.6e-45 186.4 434 33.4
FvH4_6g47002 Fragaria vesca HOM05D006368 ORTHO05D006739 4.8e-45 186.0 454 33.5
FAN14G0640 Fragaria x ananassa HOM05D006368 ORTHO05D006739 6.2e-45 185.7 454 33.5
FAN09G3687 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.4e-44 183.7 408 37.7
FvH4_6g49281 Fragaria vesca HOM05D006368 ORTHO05D006739 3.4e-43 179.9 395 38.0
RcHm_v2.0_Chr4g0430971 Rosa chinensis HOM05D006368 ORTHO05D006739 1.7e-42 177.6 455 30.5
RcHm_v2.0_Chr5g0067081 Rosa chinensis HOM05D006368 ORTHO05D006739 2.2e-42 177.2 455 31.4
FvH4_6g47001 Fragaria vesca HOM05D006368 ORTHO05D006739 1.9e-41 174.1 447 32.9
FvH4_6g49120 Fragaria vesca HOM05D006368 ORTHO05D006739 9.3e-41 171.8 414 35.0
FAN05G1932 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.9e-39 166.4 407 33.9
FAN14G0584 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.1e-36 158.3 350 35.1
FAN14G2798 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.1e-36 158.3 350 35.1
FAN02G3903 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.4e-36 157.9 417 31.4
FAN05G4829 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.1e-36 156.8 380 34.5
FAN14G2751 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.7e-34 151.0 388 32.7
FAN02G0212 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.4e-33 147.9 447 28.6
FAN02G0769 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.9e-33 147.5 359 32.6
RcHm_v2.0_Chr2g0166171 Rosa chinensis HOM05D006368 ORTHO05D006739 5.5e-33 146.0 406 31.0
FvH4_6g49640 Fragaria vesca HOM05D006368 ORTHO05D006739 3.0e-31 140.2 436 28.7
FAN14G3911 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.0e-31 140.2 362 29.0
FAN10G0746 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.9e-31 139.8 362 29.0
FvH4_6g47170 Fragaria vesca HOM05D006368 ORTHO05D006739 4.3e-30 136.3 393 30.8
FAN14G2460 Fragaria x ananassa HOM05D006368 ORTHO05D006739 9.6e-30 135.2 436 28.2
FvH4_3g30930 Fragaria vesca HOM05D006368 ORTHO05D006739 6.2e-29 132.5 357 32.2
FAN09G4055 Fragaria x ananassa HOM05D006368 ORTHO05D006739 6.9e-28 129.0 384 28.9
FvH4_6g37552 Fragaria vesca HOM05D006368 ORTHO05D006739 1.7e-26 124.4 394 29.7
FAN02G1276 Fragaria x ananassa HOM05D005035 ORTHO05D006141 1.7e-26 124.4 364 32.4
Prupe.3G239100 Prunus persica HOM05D006368 ORTHO05D006739 1.7e-26 124.4 457 29.1
RcHm_v2.0_Chr2g0166201 Rosa chinensis HOM05D006368 ORTHO05D006739 2.2e-26 124.0 429 28.2
FAN09G0854 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.8e-26 123.2 286 35.7
FvH4_6g39721 Fragaria vesca HOM05D006368 ORTHO05D006739 2.5e-25 120.6 291 33.7
FAN02G0044 Fragaria x ananassa HOM05D006368 ORTHO05D006739 7.1e-25 119.0 365 27.7
FAN14G1402 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.6e-24 117.9 365 31.0
FvH4_6g49280 Fragaria vesca HOM05D006368 ORTHO05D006739 2.7e-24 117.1 349 30.9
FAN16G0274 Fragaria x ananassa HOM05D006368 ORTHO05D006739 7.9e-24 115.5 295 31.9
FAN24G2342 Fragaria x ananassa HOM05D006368 ORTHO05D006739 7.9e-24 115.5 413 30.8
FvH4_6g46020 Fragaria vesca HOM05D006368 ORTHO05D025547 1.0e-23 115.2 372 30.9
FAN14G1520 Fragaria x ananassa HOM05D006368 ORTHO05D025547 1.0e-23 115.2 372 30.9
FAN14G5490 Fragaria x ananassa HOM05D006368 ORTHO05D025547 1.0e-23 115.2 372 30.9
MD03G1085600 Malus domestica HOM05D006368 ORTHO05D006739 2.3e-23 114.0 281 33.8
FvH4_6g36920 Fragaria vesca HOM05D006368 ORTHO05D006739 3.0e-23 113.6 350 29.7
FvH4_6g47140 Fragaria vesca HOM05D006368 ORTHO05D006739 6.7e-23 112.5 434 28.1
FAN14G0813 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.1e-22 111.7 293 32.8
FAN14G5568 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.9e-22 110.9 434 28.1
FAN02G0248 Fragaria x ananassa HOM05D006368 ORTHO05D025547 5.7e-22 109.4 372 29.8
FAN15G0762 Fragaria x ananassa HOM05D006368 ORTHO05D006739 7.4e-22 109.0 296 32.4
FAN02G2985 Fragaria x ananassa HOM05D002060 ORTHO05D002098 1.3e-21 108.2 376 29.0
FAN09G3725 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.3e-21 108.2 190 42.1
FvH4_6g47130 Fragaria vesca HOM05D006368 ORTHO05D006739 3.7e-21 106.7 422 27.5
FAN05G1788 Fragaria x ananassa HOM05D006368 ORTHO05D025547 4.8e-21 106.3 372 29.3
FAN20G1708 Fragaria x ananassa HOM05D006368 ORTHO05D006739 8.2e-21 105.5 388 30.2
FAN14G1492 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.1e-20 105.1 422 27.0
FvH4_6g47190 Fragaria vesca HOM05D006368 ORTHO05D006739 2.6e-19 100.5 356 28.4
FvH4_3g37301 Fragaria vesca HOM05D006368 ORTHO05D006739 7.7e-19 99.0 261 32.2
FvH4_2g28870 Fragaria vesca HOM05D006368 ORTHO05D006739 1.7e-18 97.8 359 31.5
FAN05G0916 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.4e-17 94.7 114 40.4
FAN05G3215 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.9e-17 94.4 277 31.8
FAN05G3822 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.5e-17 94.0 336 28.3
FAN14G3691 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.2e-17 93.6 209 34.9
FvH4_3g37281 Fragaria vesca HOM05D006368 ORTHO05D006739 9.4e-17 92.0 223 33.6
FAN22G0881 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.1e-16 90.9 135 43.0
TAR636G1638 Trochodendron aralioides HOM05D000151 ORTHO05D000074 5.1e-15 86.3 418 24.6
FAN02G1675 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.5e-14 84.7 105 43.8
MD09G1027500 Malus domestica HOM05D006368 ORTHO05D006739 2.5e-14 84.0 110 41.8
FAN09G1584 Fragaria x ananassa HOM05D006368 ORTHO05D035370 5.7e-14 82.8 327 26.3
FvH4_3g37300 Fragaria vesca HOM05D006368 ORTHO05D006739 9.7e-14 82.0 101 42.6
FAN14G4512 Fragaria x ananassa HOM05D006368 ORTHO05D006739 9.7e-14 82.0 241 34.0
FAN14G0979 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.3e-13 81.6 154 34.4
Ca_07681_v3 Cicer arietinum L. HOM05D010147 ORTHO05D006739 4.8e-13 79.7 394 25.9
FAN09G3776 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.1e-12 78.6 178 36.5
FAN25G0324 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.1e-12 78.6 210 33.3
Ca_07672_v3 Cicer arietinum L. HOM05D010147 ORTHO05D006739 1.4e-12 78.2 164 34.8
FAN14G3548 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.4e-12 78.2 331 26.6
FvH4_6g37591 Fragaria vesca HOM05D006368 ORTHO05D006739 1.8e-12 77.8 205 30.7
FAN15G3238 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.4e-12 77.4 297 28.3
FAN05G1009 Fragaria x ananassa HOM05D006368 ORTHO05D006739 9.1e-12 75.5 172 35.5
Prupe.1G016300 Prunus persica HOM05D006368 ORTHO05D006739 9.1e-12 75.5 204 29.9
Dinv43794 Davidia involucrata HOM05D000151 ORTHO05D000074 1.2e-11 75.1 383 21.9
FAN02G1786 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.0e-11 74.3 101 42.6
MD09G1050100 Malus domestica HOM05D006368 ORTHO05D006739 3.4e-11 73.6 215 31.2
Lj1g0005351 Lotus japonicus HOM05D010147 ORTHO05D006739 7.7e-11 72.4 227 26.0
FAN05G0250 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.3e-10 71.6 356 26.7
FAN09G0606 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.3e-10 71.6 145 34.5
RcHm_v2.0_Chr3g0476221 Rosa chinensis HOM05D024214 ORTHO05D016562 1.3e-10 71.6 169 30.8
Ca_07680_v3 Cicer arietinum L. HOM05D010147 ORTHO05D006739 1.7e-10 71.2 157 34.4
FAN28G1502 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.7e-10 71.2 111 39.6
Ca_07683_v3 Cicer arietinum L. HOM05D010147 ORTHO05D006739 2.2e-10 70.9 156 36.5
FvH4_6g22212 Fragaria vesca HOM05D010931 ORTHO05D016562 2.9e-10 70.5 176 26.7
Nn6g31858 Nelumbo nucifera HOM05D000151 ORTHO05D000074 3.8e-10 70.1 406 25.4
TPR.G21321 Trifolium pratense HOM05D010147 ORTHO05D006739 6.5e-10 69.3 172 31.4
FAN02G3800 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.1e-09 68.6 101 39.6
TPR.G25164 Trifolium pratense HOM05D010147 ORTHO05D006739 1.1e-09 68.6 201 32.3
Ca_07673_v3 Cicer arietinum L. HOM05D010147 ORTHO05D006739 1.9e-09 67.8 136 32.4
FAN02G2469 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.9e-09 67.8 168 31.0
Dinv43798 Davidia involucrata HOM05D000713 ORTHO05D000547 1.2e-08 65.1 159 25.8
Medtr7g069800 Medicago truncatula HOM05D010147 ORTHO05D006739 2.1e-08 64.3 153 31.4
TWI56G0068 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 6.1e-08 62.8 135 30.4
TPR.G38170 Trifolium pratense HOM05D010147 ORTHO05D006739 1.0e-07 62.0 120 30.8
FvH4_6g21331 Fragaria vesca HOM05D024214 ORTHO05D016562 2.3e-07 60.8 168 28.6
Medtr7g069820 Medicago truncatula HOM05D010147 ORTHO05D006739 2.3e-07 60.8 153 31.4
Glyma.15G081900 Glycine max HOM05D007879 ORTHO05D000440 3.0e-07 60.5 151 27.2
PSO724G1319 Papaver somniferum HOM05D003035 ORTHO05D000440 3.9e-07 60.1 147 30.6
Medtr7g069870 Medicago truncatula HOM05D010147 ORTHO05D006739 8.8e-07 58.9 154 29.9
FvH4_6g21291 Fragaria vesca HOM05D024214 ORTHO05D016562 1.1e-06 58.5 197 27.4
FAN14G2254 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.0e-06 57.8 103 38.8
PGSC0003DMG400030538 Solanum tuberosum HOM05D034039 ORTHO05D009044 2.6e-06 57.4 135 28.9
FAN12G2895 Fragaria x ananassa HOM05D006368 ORTHO05D006739 4.4e-06 56.6 96 38.5
Medtr1g025800 Medicago truncatula HOM05D010147 ORTHO05D006739 4.4e-06 56.6 165 28.5


User provided reference genes

Program Settings