Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN04G2762 Fragaria x ananassa HOM05D007182 ORTHO05D008919 3.5e-96 355.1 206 100.0
FAN13G2785 Fragaria x ananassa HOM05D007182 ORTHO05D008919 1.3e-87 326.6 208 90.9
FAN08G1433 Fragaria x ananassa HOM05D007182 ORTHO05D008919 1.8e-87 326.2 208 93.3
FvH4_5g38830 Fragaria vesca HOM05D007182 ORTHO05D008919 3.0e-87 325.5 208 93.3
FAN18G1758 Fragaria x ananassa HOM05D007182 ORTHO05D008919 1.9e-86 322.8 208 93.3
FAN04G3126 Fragaria x ananassa HOM05D007182 ORTHO05D008919 6.9e-68 261.2 213 80.3
RcHm_v2.0_Chr7g0240831 Rosa chinensis HOM05D007182 ORTHO05D008919 7.9e-64 247.7 211 78.2
Duzib041G0557 Durio zibethinus HOM05D007182 ORTHO05D008919 5.9e-35 151.8 205 44.9
Duzib116G0693 Durio zibethinus HOM05D007182 ORTHO05D008919 3.8e-34 149.1 178 50.6
Glyma.13G084500 Glycine max HOM05D007182 ORTHO05D008919 2.1e-32 143.3 195 49.7
Glyma.14G166200 Glycine max HOM05D007182 ORTHO05D008919 1.4e-31 140.6 193 48.7
Phvul.008G168400 Phaseolus vulgaris HOM05D007182 ORTHO05D008919 1.8e-31 140.2 193 48.7
Thecc.08G116300 Theobroma cacao HOM05D007182 ORTHO05D008919 6.8e-31 138.3 206 45.6
Atru.chr13.1314 Acer truncatum HOM05D007182 ORTHO05D008919 1.5e-30 137.1 188 45.7
Atru.chr13.1358 Acer truncatum HOM05D007182 ORTHO05D008919 1.5e-30 137.1 188 45.7
Potri.002G089650 Populus trichocarpa HOM05D007182 ORTHO05D008919 1.5e-30 137.1 209 41.1
Prupe.1G506300 Prunus persica HOM05D007182 ORTHO05D008919 1.5e-30 137.1 229 46.7
Duzib093G0280 Durio zibethinus HOM05D007182 ORTHO05D008919 7.5e-30 134.8 207 42.0
Gorai.010G046800 Gossypium raimondii HOM05D007182 ORTHO05D008919 1.3e-29 134.0 191 42.9
Sabra05G0129100 Salix brachista HOM05D007182 ORTHO05D008919 1.3e-29 134.0 205 39.5
CiPaw.06G024500 Carya illinoinensis HOM05D007182 ORTHO05D008919 1.7e-29 133.7 228 42.1
Glyma.04G253900 Glycine max HOM05D007182 ORTHO05D008919 2.8e-29 132.9 202 48.0
Potri.005G171600 Populus trichocarpa HOM05D007182 ORTHO05D008919 8.3e-29 131.3 202 40.1
COL.COLO4_21819 Corchorus olitorius HOM05D007182 ORTHO05D008919 1.4e-28 130.6 198 44.4
Gohir.A06G040600 Gossypium hirsutum HOM05D007182 ORTHO05D008919 1.4e-28 130.6 189 42.9
Gohir.D06G041600 Gossypium hirsutum HOM05D007182 ORTHO05D008919 1.8e-28 130.2 191 42.4
CiPaw.05G229300 Carya illinoinensis HOM05D007182 ORTHO05D008919 2.4e-28 129.8 232 41.8
Manes.02G158600 Manihot esculenta HOM05D007182 ORTHO05D008919 4.1e-28 129.0 215 42.8
VMungo0647G1564 Vigna mungo HOM05D007182 ORTHO05D008919 4.1e-28 129.0 187 47.6
Lalb_Chr08g0241731 Lupinus albus HOM05D007182 ORTHO05D008919 7.0e-28 128.3 200 44.5
Glyma.06G108400 Glycine max HOM05D007182 ORTHO05D008919 9.2e-28 127.9 205 46.8
Rhsim06G0109300 Rhododendron simsii HOM05D007182 ORTHO05D008919 9.2e-28 127.9 200 44.0
Medtr3g073330 Medicago truncatula HOM05D007182 ORTHO05D008919 1.2e-27 127.5 200 42.5
TPR.G32946 Trifolium pratense HOM05D007182 ORTHO05D008919 1.6e-27 127.1 186 45.7
AT1G36940 Arabidopsis thaliana HOM05D007182 ORTHO05D008919 2.7e-27 126.3 173 45.1
MELO3C022789.2 Cucumis melo HOM05D007182 ORTHO05D008919 2.7e-27 126.3 241 39.0
Thhalv10004990m.g Eutrema salsugineum HOM05D007182 ORTHO05D008919 3.5e-27 125.9 177 45.8
Psat5g134040 Pisum sativum HOM05D007182 ORTHO05D008919 7.8e-27 124.8 203 42.9
Manes.18G072600 Manihot esculenta HOM05D007182 ORTHO05D008919 1.3e-26 124.0 180 43.3
ClCG03G009070 Citrullus lanatus HOM05D007182 ORTHO05D008919 2.9e-26 122.9 241 37.3
Phvul.009G025900 Phaseolus vulgaris HOM05D007182 ORTHO05D008919 8.6e-26 121.3 201 46.8
Hma1.2p1_0221F.1_g093130 Hydrangea macrophylla HOM05D007182 ORTHO05D008919 1.1e-25 120.9 218 45.4
AL1G51080 Arabidopsis lyrata HOM05D007182 ORTHO05D008919 1.9e-25 120.2 172 44.8
Lj1g0017374 Lotus japonicus HOM05D007182 ORTHO05D008919 1.9e-25 120.2 241 41.9
Carub.0001s3387 Capsella rubella HOM05D007182 ORTHO05D008919 2.5e-25 119.8 171 45.6
Lalb_Chr11g0065671 Lupinus albus HOM05D007182 ORTHO05D008919 3.3e-25 119.4 226 42.5
TWI36G1401 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 5.6e-25 118.6 212 41.5
Ciclev10002385m.g Citrus clementina HOM05D007182 ORTHO05D008919 2.8e-24 116.3 209 42.6
Sabra02G0070600 Salix brachista HOM05D007182 ORTHO05D008919 2.8e-24 116.3 174 43.1
TWI56G1442 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 2.8e-24 116.3 183 39.9
VMungo1309G0514 Vigna mungo HOM05D007182 ORTHO05D008919 3.6e-24 115.9 185 45.4
TPR.G30417 Trifolium pratense HOM05D007182 ORTHO05D008919 8.0e-24 114.8 198 46.0
BcaB03g13641 Brassica carinata HOM05D007182 ORTHO05D008919 2.3e-23 113.2 181 43.1
CARHR034810 Cardamine hirsuta HOM05D007182 ORTHO05D008919 2.3e-23 113.2 171 45.6
Eucgr.F03740 Eucalyptus grandis HOM05D007182 ORTHO05D008919 3.0e-23 112.8 201 43.3
Dinv26722 Davidia involucrata HOM05D007182 ORTHO05D008919 5.2e-23 112.1 160 46.9
Lalb_Chr10g0102011 Lupinus albus HOM05D007182 ORTHO05D008919 6.8e-23 111.7 218 38.5
Sed0021526 Sechium edule HOM05D007182 ORTHO05D008919 8.9e-23 111.3 250 36.0
PGR042G1174 Punica granatum HOM05D007182 ORTHO05D008919 1.2e-22 110.9 207 42.0
Cc00_g10670 Coffea canephora HOM05D007182 ORTHO05D008919 2.6e-22 109.8 219 39.3
TWI12G0744 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 2.6e-22 109.8 220 35.9
Lj1g0021904 Lotus japonicus HOM05D007182 ORTHO05D008919 2.2e-21 106.7 252 37.3
THA.LOC104813133 Tarenaya hassleriana HOM05D007182 ORTHO05D008919 2.2e-21 106.7 177 40.7
CsaV3_5G023550 Cucumis sativus L. HOM05D007182 ORTHO05D008919 2.9e-21 106.3 216 36.6
PGSC0003DMG400027800 Solanum tuberosum HOM05D007182 ORTHO05D008919 2.9e-21 106.3 214 37.4
Aa31LG6G9060 Aethionema arabicum HOM05D007182 ORTHO05D008919 3.7e-21 105.9 173 39.9
A05p23400 Brassica napus HOM05D007182 ORTHO05D008919 8.3e-21 104.8 187 40.1
BraA05t21203Z Brassica rapa HOM05D007182 ORTHO05D008919 8.3e-21 104.8 187 40.1
TAR197G0002 Trochodendron aralioides HOM05D007182 ORTHO05D008919 5.4e-20 102.1 197 35.0
Dinv27387 Davidia involucrata HOM05D007182 ORTHO05D008919 7.0e-20 101.7 89 62.9
Sp1g31070 Schrenkiella parvula HOM05D007182 ORTHO05D008919 7.0e-20 101.7 138 45.7
Solyc11g013500.1 Solanum lycopersicum HOM05D007182 ORTHO05D008919 7.0e-20 101.7 184 39.7
Gorai.009G242300 Gossypium raimondii HOM05D007182 ORTHO05D008919 9.2e-20 101.3 185 40.0
Sopen11g008530 Solanum pennellii HOM05D007182 ORTHO05D008919 9.2e-20 101.3 212 37.3
Sc23g0000930 Simmondsia chinensis HOM05D007182 ORTHO05D008919 6.0e-19 98.6 245 33.5
Nitab4.5_0009801g0010 Nicotiana tabacum HOM05D007182 ORTHO05D008919 1.7e-18 97.1 168 42.3
Gohir.D05G234100 Gossypium hirsutum HOM05D007182 ORTHO05D008919 3.0e-18 96.3 186 38.7
DCAR_023125 Daucus carota HOM05D007182 ORTHO05D008919 5.0e-18 95.5 165 40.0
Peaxi162Scf00476g00051 Petunia axillaris HOM05D007182 ORTHO05D008919 5.0e-18 95.5 176 38.6
THA.LOC104806807 Tarenaya hassleriana HOM05D007182 ORTHO05D008919 5.0e-18 95.5 176 37.5
Gohir.A05G231800 Gossypium hirsutum HOM05D007182 ORTHO05D008919 6.6e-18 95.1 183 39.3
TAR628G0731 Trochodendron aralioides HOM05D007182 ORTHO05D008919 1.1e-17 94.4 141 45.4
Migut.N03323 Erythranthe guttata HOM05D007182 ORTHO05D008919 1.9e-17 93.6 187 36.4
Nn5g27955 Nelumbo nucifera HOM05D007182 ORTHO05D008919 4.3e-17 92.4 207 34.8
TAR127G0001 Trochodendron aralioides HOM05D007182 ORTHO05D008919 5.6e-17 92.0 167 40.1
Oeu043797.1 Olea europaea HOM05D000316 ORTHO05D008919 1.2e-16 90.9 178 37.6
Oeu043798.1 Olea europaea HOM05D000316 ORTHO05D008919 1.2e-16 90.9 178 37.6
Medtr5g060450 Medicago truncatula HOM05D007182 ORTHO05D008919 1.6e-16 90.5 163 39.9
SGA_v2.0_scaffold28G12033 Striga asiatica HOM05D007182 ORTHO05D008919 2.8e-16 89.7 179 37.4
EL10Ac1g00042 Beta vulgaris HOM05D007182 ORTHO05D008919 6.2e-16 88.6 230 31.7
DCAR_014791 Daucus carota HOM05D007182 ORTHO05D008919 8.0e-16 88.2 168 38.1
Oeu017862.1 Olea europaea HOM05D007182 ORTHO05D008919 2.0e-14 83.6 173 35.8
Nn1g08539 Nelumbo nucifera HOM05D007182 ORTHO05D008919 1.3e-13 80.9 181 37.0
Nitab4.5_0000051g0140 Nicotiana tabacum HOM05D007182 ORTHO05D008919 3.7e-13 79.3 121 43.8
SGA_v2.0_scaffold118G32440 Striga asiatica HOM05D007182 ORTHO05D008919 3.7e-13 79.3 176 35.8
MSTRG.1489 Avicennia marina HOM05D007182 ORTHO05D008919 7.0e-12 75.1 149 35.6
Lsat_1_v5_gn_4_133360 Lactuca sativa HOM05D007182 ORTHO05D008919 1.2e-11 74.3 186 37.6
Ah.05g172700 Amaranthus hybridus HOM05D007182 ORTHO05D008919 1.3e-10 70.9 219 29.7
SalBow7G0102 Salvia bowleyana HOM05D007182 ORTHO05D008919 3.3e-09 66.2 189 32.8
SalBow7G3005 Salvia bowleyana HOM05D007182 ORTHO05D008919 3.3e-09 66.2 189 32.8
AUR62004689 Chenopodium quinoa HOM05D007182 ORTHO05D008919 2.1e-08 63.5 169 37.3
DCAR_014280 Daucus carota HOM05D007182 ORTHO05D008919 2.1e-08 63.5 174 34.5
ECA247G3744 Erigeron canadensis HOM05D007182 ORTHO05D008919 2.8e-08 63.2 173 31.8
Lsat_1_v5_gn_1_25160 Lactuca sativa HOM05D007182 ORTHO05D008919 1.1e-07 61.2 193 30.6


User provided reference genes

Program Settings