Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN04G2725 Fragaria x ananassa HOM05D008113 ORTHO05D009793 2.7e-89 332.0 172 100.0
FAN08G1006 Fragaria x ananassa HOM05D008113 ORTHO05D009793 4.7e-86 321.2 172 97.1
FvH4_5g22080 Fragaria vesca HOM05D008113 ORTHO05D009793 3.1e-77 292.0 157 96.2
RcHm_v2.0_Chr7g0209731 Rosa chinensis HOM05D008113 ORTHO05D009793 4.7e-70 268.1 168 84.5
Prupe.5G036500 Prunus persica HOM05D008113 ORTHO05D009793 1.5e-55 219.9 171 70.2
FAN18G0344 Fragaria x ananassa HOM05D008113 ORTHO05D009793 2.2e-51 206.1 125 88.0
Cfa012440 Carpinus fangiana HOM05D008113 ORTHO05D009793 4.9e-35 151.8 166 56.6
CiPaw.11G093400 Carya illinoinensis HOM05D008113 ORTHO05D009793 4.2e-34 148.7 170 55.3
QL12p005179 Quercus lobata HOM05D008113 ORTHO05D009793 6.7e-32 141.4 171 52.6
Duzib205G0546 Durio zibethinus HOM05D008113 ORTHO05D009793 8.7e-32 141.0 145 57.2
MD06G1034100 Malus domestica HOM05D008113 ORTHO05D009793 3.3e-31 139.0 155 54.2
Thecc.03G227800 Theobroma cacao HOM05D008113 ORTHO05D009793 3.7e-30 135.6 149 55.7
Atru.chr6.1709 Acer truncatum HOM05D008113 ORTHO05D009793 4.8e-30 135.2 173 52.0
MD06G1034200 Malus domestica HOM05D008113 ORTHO05D009793 6.3e-30 134.8 155 51.6
Dinv28958 Davidia involucrata HOM05D008113 ORTHO05D009793 8.2e-30 134.4 169 49.1
COL.COLO4_17032 Corchorus olitorius HOM05D008113 ORTHO05D009793 5.3e-29 131.7 171 50.9
CSS0012952 Camellia sinensis var. sinensis HOM05D008113 ORTHO05D009793 6.9e-29 131.3 172 48.3
CSS0027769 Camellia sinensis var. sinensis HOM05D008113 ORTHO05D009793 6.9e-29 131.3 172 48.3
Manes.17G015710 Manihot esculenta HOM05D008113 ORTHO05D009793 1.5e-28 130.2 168 44.0
Ciclev10012946m.g Citrus clementina HOM05D008113 ORTHO05D009793 4.5e-28 128.6 173 49.1
Gohir.A03G000900 Gossypium hirsutum HOM05D008113 ORTHO05D009793 1.7e-27 126.7 144 53.5
Haze_08228 Corylus avellana HOM05D008113 ORTHO05D009793 2.9e-27 125.9 140 55.7
Gorai.003G181900 Gossypium raimondii HOM05D008113 ORTHO05D009793 1.9e-26 123.2 148 52.0
Lj2g0011936 Lotus japonicus HOM05D008113 ORTHO05D009793 1.9e-26 123.2 173 46.2
CSS0025106 Camellia sinensis var. sinensis HOM05D008113 ORTHO05D009793 2.5e-26 122.9 161 46.6
Gohir.D03G171300 Gossypium hirsutum HOM05D008113 ORTHO05D009793 2.5e-26 122.9 148 51.4
Sabra01G0111000 Salix brachista HOM05D008113 ORTHO05D009793 4.6e-25 118.6 172 46.5
TWI60G1148 Tripterygium wilfordii HOM05D008113 ORTHO05D009793 7.9e-25 117.9 158 47.5
Glyma.09G204200 Glycine max HOM05D008113 ORTHO05D009793 3.9e-24 115.5 173 43.9
Ca_06079_v3 Cicer arietinum L. HOM05D008113 ORTHO05D009793 8.7e-24 114.4 176 43.2
Medtr5g030480 Medicago truncatula HOM05D008113 ORTHO05D009793 8.7e-24 114.4 174 44.8
Phvul.002G141700 Phaseolus vulgaris HOM05D008113 ORTHO05D009793 1.1e-23 114.0 163 47.2
VMungo1215G1592 Vigna mungo HOM05D008113 ORTHO05D009793 1.1e-23 114.0 167 47.3
Potri.001G142300 Populus trichocarpa HOM05D008113 ORTHO05D009793 1.3e-22 110.5 162 48.1
Sed0025759 Sechium edule HOM05D008113 ORTHO05D009793 2.4e-21 106.3 164 43.3
MELO3C003410.2 Cucumis melo HOM05D008113 ORTHO05D009793 4.1e-21 105.5 155 45.8
CsaV3_3G049170 Cucumis sativus L. HOM05D008113 ORTHO05D009793 5.3e-21 105.1 155 45.8
Sed0024146 Sechium edule HOM05D008113 ORTHO05D009793 5.3e-21 105.1 164 42.7
Psat2g135920 Pisum sativum HOM05D008113 ORTHO05D009793 6.9e-21 104.8 173 42.2
DCAR_008271 Daucus carota HOM05D008113 ORTHO05D009793 1.2e-20 104.0 162 45.7
Hma1.2p1_1063F.1_g253560 Hydrangea macrophylla HOM05D008113 ORTHO05D009793 1.2e-20 104.0 168 40.5
Rhsim07G0125800 Rhododendron simsii HOM05D008113 ORTHO05D009793 1.0e-19 100.9 171 41.5
Nn1g08044 Nelumbo nucifera HOM05D008113 ORTHO05D009793 1.3e-19 100.5 168 41.1
Rhsim07G0126900 Rhododendron simsii HOM05D008113 ORTHO05D009793 1.7e-19 100.1 171 40.9
Hma1.2p1_2704F.1_g327140 Hydrangea macrophylla HOM05D008113 ORTHO05D009793 2.2e-19 99.8 168 39.9
Glyma.01G018600 Glycine max HOM05D008113 ORTHO05D009793 2.5e-18 96.3 175 40.6
Actinidia09200 Actinidia chinensis HOM05D008113 ORTHO05D009793 3.6e-17 92.4 159 42.8
CANSAT21G0751 Cannabis sativa HOM05D008113 ORTHO05D009793 4.7e-17 92.0 178 42.1
Actinidia09205 Actinidia chinensis HOM05D008113 ORTHO05D009793 7.9e-17 91.3 115 45.2
Aqoxy3G02349 Aquilegia oxysepala HOM05D008113 ORTHO05D009793 3.0e-16 89.4 155 41.9
MSTRG.1985 Avicennia marina HOM05D008113 ORTHO05D009793 1.1e-15 87.4 168 39.3
Ah.12g055040 Amaranthus hybridus HOM05D008113 ORTHO05D009793 2.2e-14 83.2 138 42.0
MBI04_g23600_MAGBIO Magnolia biondii HOM05D008113 ORTHO05D009793 1.8e-13 80.1 155 38.1
Sc22g0001540 Simmondsia chinensis HOM05D008113 ORTHO05D009793 3.1e-13 79.3 141 37.6
PSO063G7600 Papaver somniferum HOM05D008113 ORTHO05D009793 2.0e-12 76.6 170 37.1
ECA233G2707 Erigeron canadensis HOM05D008113 ORTHO05D009793 3.4e-12 75.9 144 40.3
PSO782G0685 Papaver somniferum HOM05D008113 ORTHO05D009793 3.4e-12 75.9 168 35.7
SGA_v2.0_scaffold20G09258 Striga asiatica HOM05D008113 ORTHO05D009793 3.8e-11 72.4 167 36.5
Lalb_Chr16g0381371 Lupinus albus HOM05D008113 ORTHO05D009793 1.1e-10 70.9 164 36.6
CARHR032060 Cardamine hirsuta HOM05D012772 ORTHO05D009793 1.4e-10 70.5 85 45.9
EL10Ac5g12119 Beta vulgaris HOM05D008113 ORTHO05D009793 1.9e-10 70.1 94 45.7
Migut.E00933 Erythranthe guttata HOM05D008113 ORTHO05D009793 6.1e-09 65.1 172 33.7
THA.LOC104814445 Tarenaya hassleriana HOM05D008113 ORTHO05D009793 8.0e-09 64.7 159 37.7
AUR62007292 Chenopodium quinoa HOM05D008113 ORTHO05D009793 1.0e-08 64.3 80 47.5
AUR62018715 Chenopodium quinoa HOM05D008113 ORTHO05D009793 1.4e-08 63.9 101 43.6
Sopen08g001050 Solanum pennellii HOM05D023668 ORTHO05D009793 3.3e-07 59.3 211 29.9
TPR.G1024 Trifolium pratense HOM05D008113 ORTHO05D009793 3.3e-07 59.3 177 34.5
Thhalv10009063m.g Eutrema salsugineum HOM05D012772 ORTHO05D009793 5.7e-07 58.5 171 32.2
PGSC0003DMG400001153 Solanum tuberosum HOM05D023668 ORTHO05D009793 5.7e-07 58.5 200 31.0
unitig_22.g5500 Utricularia gibba HOM05D008113 ORTHO05D009793 2.8e-06 56.2 166 34.9
Carub.0001s3101 Capsella rubella HOM05D012772 ORTHO05D009793 8.2e-06 54.7 164 30.5


User provided reference genes

Program Settings