Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN04G2461 Fragaria x ananassa HOM05D007696 ORTHO05D009719 1.4e-128 463.0 244 100.0
FAN13G0134 Fragaria x ananassa HOM05D007696 ORTHO05D009719 1.6e-95 353.2 222 86.9
FAN08G1182 Fragaria x ananassa HOM05D007696 ORTHO05D009719 3.0e-94 349.0 220 86.8
FvH4_5g12640 Fragaria vesca HOM05D007696 ORTHO05D009719 1.9e-93 346.3 224 85.7
FAN18G2008 Fragaria x ananassa HOM05D007696 ORTHO05D009719 3.1e-91 339.0 236 80.9
FAN18G3725 Fragaria x ananassa HOM05D007696 ORTHO05D009719 3.4e-90 335.5 223 84.8
RcHm_v2.0_Chr7g0184691 Rosa chinensis HOM05D007696 ORTHO05D009719 3.0e-86 322.4 223 78.0
Prupe.5G218000 Prunus persica HOM05D007696 ORTHO05D009719 3.6e-63 245.7 223 61.0
QL10p022430 Quercus lobata HOM05D007696 ORTHO05D009719 2.6e-61 239.6 220 61.8
MD14G1222400 Malus domestica HOM05D007696 ORTHO05D009719 3.3e-61 239.2 220 60.0
Manes.01G020300 Manihot esculenta HOM05D007696 ORTHO05D009719 3.7e-60 235.7 218 57.3
CiPaw.15G127500 Carya illinoinensis HOM05D007696 ORTHO05D009719 9.4e-56 221.1 220 55.5
CANSAT54G0455 Cannabis sativa HOM05D007696 ORTHO05D009719 2.7e-55 219.5 220 55.0
Atru.chr9.778 Acer truncatum HOM05D007696 ORTHO05D009719 4.7e-55 218.8 213 57.3
CANSAT54G2838 Cannabis sativa HOM05D007696 ORTHO05D009719 1.0e-54 217.6 220 55.5
GSVIVG01008244001 Vitis vinifera HOM05D007696 ORTHO05D009719 1.4e-54 217.2 220 55.0
TWI81G0276 Tripterygium wilfordii HOM05D007696 ORTHO05D009719 5.2e-54 215.3 217 56.2
Lj9A429T50 Lonicera japonica HOM05D007696 ORTHO05D009719 8.8e-54 214.5 217 57.1
Potri.015G049800 Populus trichocarpa HOM05D007696 ORTHO05D009719 8.8e-54 214.5 218 56.0
Actinidia39813 Actinidia chinensis HOM05D007696 ORTHO05D009719 1.2e-53 214.2 220 52.7
Cfa019805 Carpinus fangiana HOM05D007696 ORTHO05D009719 3.2e-48 196.1 211 53.6
Ciclev10022427m.g Citrus clementina HOM05D007696 ORTHO05D009719 1.2e-47 194.1 191 56.0
Cc04_g07460 Coffea canephora HOM05D007696 ORTHO05D009719 2.1e-47 193.4 218 51.4
Aqoxy3G03910 Aquilegia oxysepala HOM05D007696 ORTHO05D009719 1.0e-46 191.0 220 49.5
Lalb_Chr19g0140261 Lupinus albus HOM05D007696 ORTHO05D009719 1.0e-46 191.0 220 49.1
ECA232G0656 Erigeron canadensis HOM05D007696 ORTHO05D009719 2.3e-46 189.9 217 49.3
Sc04g0003700 Simmondsia chinensis HOM05D007696 ORTHO05D009719 2.3e-46 189.9 228 48.7
Lsat_1_v5_gn_4_115821 Lactuca sativa HOM05D007696 ORTHO05D009719 8.8e-46 188.0 213 50.7
Dinv07368 Davidia involucrata HOM05D007696 ORTHO05D009719 2.4e-43 179.9 217 48.8
Phvul.011G012300 Phaseolus vulgaris HOM05D007696 ORTHO05D009719 4.1e-43 179.1 226 47.3
COL.COLO4_16235 Corchorus olitorius HOM05D007696 ORTHO05D009719 1.2e-42 177.6 187 53.5
AUR62032195 Chenopodium quinoa HOM05D007696 ORTHO05D009719 4.5e-42 175.6 217 47.9
Duzib068G0054 Durio zibethinus HOM05D007696 ORTHO05D009719 1.0e-41 174.5 189 51.9
Gohir.D08G105400 Gossypium hirsutum HOM05D007696 ORTHO05D009719 1.0e-41 174.5 189 52.4
Gorai.004G112300 Gossypium raimondii HOM05D007696 ORTHO05D009719 1.0e-41 174.5 189 52.4
arahy.Tifrunner.gnm1.ann1.ISQN6X Arachis hypogaea HOM05D007696 ORTHO05D009719 2.3e-41 173.3 214 48.1
Thecc.03G029300 Theobroma cacao HOM05D007696 ORTHO05D009719 2.9e-41 172.9 189 52.4
vmacro17668 Vaccinium macrocarpon HOM05D007696 ORTHO05D009719 2.9e-41 172.9 217 47.0
Gohir.A08G094200 Gossypium hirsutum HOM05D007696 ORTHO05D009719 8.6e-41 171.4 185 52.4
VMungo1127G1702 Vigna mungo HOM05D007696 ORTHO05D009719 1.6e-39 167.2 214 46.7
AUR62036960 Chenopodium quinoa HOM05D007696 ORTHO05D009719 2.1e-39 166.8 217 46.1
Nn4g23733 Nelumbo nucifera HOM05D007696 ORTHO05D009719 2.8e-39 166.4 220 45.5
BcaB01g01733 Brassica carinata HOM05D007696 ORTHO05D009719 4.7e-39 165.6 182 50.5
TAR622G0575 Trochodendron aralioides HOM05D007696 ORTHO05D009719 6.1e-39 165.2 185 53.0
Thhalv10027967m.g Eutrema salsugineum HOM05D007696 ORTHO05D009719 2.3e-38 163.3 182 50.5
Lj3g0018148 Lotus japonicus HOM05D007696 ORTHO05D009719 3.0e-38 162.9 214 46.7
THA.LOC104821847 Tarenaya hassleriana HOM05D007696 ORTHO05D009719 5.2e-38 162.2 182 50.0
arahy.Tifrunner.gnm1.ann1.2ZW1BF Arachis hypogaea HOM05D007696 ORTHO05D009719 6.8e-38 161.8 237 43.5
TPR.G30177 Trifolium pratense HOM05D007696 ORTHO05D009719 2.0e-37 160.2 194 47.4
MBI13_g27794_MAGBIO Magnolia biondii HOM05D007696 ORTHO05D009719 2.6e-37 159.8 191 49.7
Sp7g03680 Schrenkiella parvula HOM05D007696 ORTHO05D009719 7.5e-37 158.3 182 48.4
Eucgr.K02660 Eucalyptus grandis HOM05D007696 ORTHO05D009719 6.3e-36 155.2 191 46.6
PSO063G6876 Papaver somniferum HOM05D007696 ORTHO05D009719 6.3e-36 155.2 216 46.8
Oeu055893.1 Olea europaea HOM05D007696 ORTHO05D009719 2.4e-35 153.3 187 46.0
Glyma.09G227800 Glycine max HOM05D007696 ORTHO05D009719 7.0e-35 151.8 187 47.6
HanXRQChr09g0269891 Helianthus annuus HOM05D007696 ORTHO05D009719 2.7e-34 149.8 224 43.8
Hund10004 Selenicereus undatus HOM05D007696 ORTHO05D009719 5.9e-34 148.7 217 44.2
EL10Ac5g11256 Beta vulgaris HOM05D007696 ORTHO05D009719 2.8e-31 139.8 220 43.2
AL2G14870 Arabidopsis lyrata HOM05D007696 ORTHO05D009719 4.0e-30 136.0 182 44.5
Psat7g166400 Pisum sativum HOM05D007696 ORTHO05D009719 5.2e-30 135.6 193 43.0
CAN.G438.120 Capsicum annuum HOM05D007696 ORTHO05D009719 2.6e-29 133.3 187 44.9
A09p26940 Brassica napus HOM05D007696 ORTHO05D009719 7.5e-29 131.7 182 43.4
BraA09t38264Z Brassica rapa HOM05D007696 ORTHO05D009719 7.5e-29 131.7 182 43.4
AT1G61415 Arabidopsis thaliana HOM05D007696 ORTHO05D009719 2.2e-28 130.2 182 43.4
CARHR051130 Cardamine hirsuta HOM05D007696 ORTHO05D009719 2.2e-28 130.2 182 42.3
BcaC04g21230 Brassica carinata HOM05D007696 ORTHO05D009719 6.4e-28 128.6 182 42.3
C09p34110 Brassica napus HOM05D007696 ORTHO05D009719 6.4e-28 128.6 182 42.3
BolC9t56248H Brassica oleracea HOM05D007696 ORTHO05D009719 6.4e-28 128.6 182 42.3
AL2G14920 Arabidopsis lyrata HOM05D007696 ORTHO05D009719 1.2e-26 124.4 182 41.8
Carub.0002s0377 Capsella rubella HOM05D007696 ORTHO05D009719 5.0e-25 119.0 182 41.8
Medtr0085s0020 Medicago truncatula HOM05D007696 ORTHO05D009719 8.0e-23 111.7 130 45.4
Zm00001eb347780 Zea mays HOM05D007696 ORTHO05D009719 4.0e-22 109.4 216 37.5
CSS0029722 Camellia sinensis var. sinensis HOM05D007696 ORTHO05D009719 6.8e-22 108.6 126 56.3
Rhsim08G0136100 Rhododendron simsii HOM05D007696 ORTHO05D009719 3.4e-21 106.3 307 30.9
DCAR_011551 Daucus carota HOM05D007696 ORTHO05D009719 5.8e-21 105.5 111 56.8
Cpa.g.sc13.41 Carica papaya HOM05D007696 ORTHO05D009719 9.8e-21 104.8 123 49.6
Hma1.2p1_0340F.1_g129840 Hydrangea macrophylla HOM05D007696 ORTHO05D009719 4.1e-19 99.4 93 51.6
Hma1.2p1_0340F.1_g129846 Hydrangea macrophylla HOM05D007696 ORTHO05D009719 4.1e-19 99.4 93 51.6
Hma1.2p1_0340F.1_g129830 Hydrangea macrophylla HOM05D007696 ORTHO05D009719 1.0e-17 94.7 90 58.9
Hma1.2p1_0340F.1_g129843 Hydrangea macrophylla HOM05D007696 ORTHO05D009719 1.0e-17 94.7 90 58.9
Sabra15G0078100 Salix brachista HOM05D007696 ORTHO05D009719 8.6e-17 91.7 98 50.0
Os05g0275600 Oryza sativa ssp. japonica HOM05D007696 ORTHO05D009719 1.1e-16 91.3 216 36.1
CDE02G2124 Ceratophyllum demersum HOM05D007696 ORTHO05D009719 2.1e-15 87.0 121 44.6
Haze_18634 Corylus avellana HOM05D007696 ORTHO05D009719 2.3e-14 83.6 87 57.5
Aa31LG8G5380 Aethionema arabicum HOM05D007696 ORTHO05D009719 2.4e-11 73.6 138 34.1
Lsat_1_v5_gn_9_67701 Lactuca sativa HOM05D007696 ORTHO05D009719 3.2e-11 73.2 71 60.6
AT1G61450 Arabidopsis thaliana HOM05D007696 ORTHO05D009719 1.6e-10 70.9 121 39.7
VMungo0251G1113 Vigna mungo HOM05D007696 ORTHO05D009719 4.3e-08 62.8 107 40.2


User provided reference genes

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