Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN04G2384 Fragaria x ananassa HOM05D007638 ORTHO05D009805 2.1e-118 429.1 223 100.0
FvH4_5g18700 Fragaria vesca HOM05D007638 ORTHO05D009805 8.3e-83 310.8 206 83.0
RcHm_v2.0_Chr7g0202991 Rosa chinensis HOM05D007638 ORTHO05D009805 4.1e-74 282.0 208 73.6
MD06G1060400 Malus domestica HOM05D007638 ORTHO05D009805 7.5e-68 261.2 208 63.9
Prupe.5G071400 Prunus persica HOM05D007638 ORTHO05D009805 9.8e-68 260.8 215 61.9
FAN18G0664 Fragaria x ananassa HOM05D007638 ORTHO05D009805 2.2e-67 259.6 171 84.2
FAN08G1927 Fragaria x ananassa HOM05D007638 ORTHO05D009805 5.0e-64 248.4 206 71.8
FAN13G2113 Fragaria x ananassa HOM05D007638 ORTHO05D009805 1.1e-63 247.3 173 80.3
Cfa012740 Carpinus fangiana HOM05D007638 ORTHO05D009805 3.6e-62 242.3 200 58.5
Dinv39130 Davidia involucrata HOM05D007638 ORTHO05D009805 1.4e-61 240.4 208 57.7
Thecc.03G253300 Theobroma cacao HOM05D007638 ORTHO05D009805 2.3e-61 239.6 208 57.7
QL12p012553 Quercus lobata HOM05D007638 ORTHO05D009805 9.8e-60 234.2 200 58.0
CiPaw.12G109000 Carya illinoinensis HOM05D007638 ORTHO05D009805 1.7e-59 233.4 207 56.5
Hma1.2p1_2238F.1_g317800 Hydrangea macrophylla HOM05D007638 ORTHO05D009805 3.7e-59 232.3 200 57.0
Gorai.006G213300 Gossypium raimondii HOM05D007638 ORTHO05D009805 6.4e-59 231.5 201 56.2
Sed0016401 Sechium edule HOM05D007638 ORTHO05D009805 6.4e-59 231.5 200 57.0
HanXRQChr17g0549771 Helianthus annuus HOM05D007638 ORTHO05D009805 4.1e-58 228.8 200 56.5
Lalb_Chr16g0389341 Lupinus albus HOM05D007638 ORTHO05D009805 4.1e-58 228.8 201 54.7
TAR636G1390 Trochodendron aralioides HOM05D007638 ORTHO05D009805 4.1e-58 228.8 201 56.2
Gohir.D09G190600 Gossypium hirsutum HOM05D007638 ORTHO05D009805 5.4e-58 228.4 201 55.7
Rhsim09G0039100 Rhododendron simsii HOM05D007638 ORTHO05D009805 5.4e-58 228.4 210 54.3
TPR.G37700 Trifolium pratense HOM05D007638 ORTHO05D009805 7.0e-58 228.0 209 53.6
Potri.003G110600 Populus trichocarpa HOM05D007638 ORTHO05D009805 1.2e-57 227.3 208 56.2
Ciclev10020230m.g Citrus clementina HOM05D007638 ORTHO05D009805 1.6e-57 226.9 208 53.8
Hma1.2p1_3173F.1_g333580 Hydrangea macrophylla HOM05D007638 ORTHO05D009805 1.6e-57 226.9 200 56.0
Lj4g0022413 Lotus japonicus HOM05D007638 ORTHO05D009805 1.6e-57 226.9 208 54.3
Gohir.A09G196000 Gossypium hirsutum HOM05D007638 ORTHO05D009805 3.5e-57 225.7 200 55.5
Manes.02G038700 Manihot esculenta HOM05D007638 ORTHO05D009805 3.5e-57 225.7 200 56.0
GSVIVG01001312001 Vitis vinifera HOM05D007638 ORTHO05D009805 1.7e-56 223.4 223 51.1
Glyma.05G058500 Glycine max HOM05D007638 ORTHO05D009805 2.3e-56 223.0 201 54.7
Nn1g01039 Nelumbo nucifera HOM05D007638 ORTHO05D009805 2.3e-56 223.0 201 54.2
Oeu017018.1 Olea europaea HOM05D007638 ORTHO05D009805 5.0e-56 221.9 207 51.7
Atru.chr9.1327 Acer truncatum HOM05D007638 ORTHO05D009805 1.5e-55 220.3 209 53.6
CsaV3_5G004170 Cucumis sativus L. HOM05D007638 ORTHO05D009805 1.5e-55 220.3 206 53.9
TWI15G0131 Tripterygium wilfordii HOM05D007638 ORTHO05D009805 3.3e-55 219.2 225 49.3
Ca_21958_v3 Cicer arietinum L. HOM05D007638 ORTHO05D009805 4.3e-55 218.8 209 52.6
CANSAT21G1304 Cannabis sativa HOM05D007638 ORTHO05D009805 1.2e-54 217.2 202 53.0
Peaxi162Scf00002g00171 Petunia axillaris HOM05D007638 ORTHO05D009805 2.1e-54 216.5 199 53.8
Eucgr.D02067 Eucalyptus grandis HOM05D007638 ORTHO05D009805 3.1e-53 212.6 201 53.2
arahy.Tifrunner.gnm1.ann1.UY0NCU Arachis hypogaea HOM05D007638 ORTHO05D009805 4.0e-53 212.2 201 53.2
EL10Ac5g13054 Beta vulgaris HOM05D007638 ORTHO05D009805 4.0e-53 212.2 201 53.2
Sabra03G0076700 Salix brachista HOM05D007638 ORTHO05D009805 4.0e-53 212.2 208 53.8
MSTRG.25529 Avicennia marina HOM05D007638 ORTHO05D009805 1.2e-52 210.7 208 51.0
Sopen08g027220 Solanum pennellii HOM05D007638 ORTHO05D009805 1.2e-52 210.7 207 52.2
Solyc08g078750.4 Solanum lycopersicum HOM05D007638 ORTHO05D009805 1.5e-52 210.3 207 52.2
CAN.G1218.20 Capsicum annuum HOM05D007638 ORTHO05D009805 2.6e-52 209.5 207 52.7
Migut.A00967 Erythranthe guttata HOM05D007638 ORTHO05D009805 1.7e-51 206.8 202 51.0
Lsat_1_v5_gn_3_541 Lactuca sativa HOM05D007638 ORTHO05D009805 2.2e-51 206.5 203 50.7
Cc08_g12610 Coffea canephora HOM05D007638 ORTHO05D009805 1.1e-50 204.1 201 51.2
DCAR_008488 Daucus carota HOM05D007638 ORTHO05D009805 5.4e-50 201.8 208 57.2
Hund14529 Selenicereus undatus HOM05D007638 ORTHO05D009805 5.4e-50 201.8 201 51.2
Sc07g0009320 Simmondsia chinensis HOM05D007638 ORTHO05D009805 9.2e-50 201.1 204 49.0
PSO781G0038 Papaver somniferum HOM05D007638 ORTHO05D009805 1.2e-49 200.7 210 49.5
AUR62007504 Chenopodium quinoa HOM05D007638 ORTHO05D009805 2.7e-49 199.5 197 50.8
Ah.02g116770 Amaranthus hybridus HOM05D007638 ORTHO05D009805 4.6e-49 198.7 201 49.8
AUR62039957 Chenopodium quinoa HOM05D007638 ORTHO05D009805 3.0e-48 196.1 197 50.3
CDE11G1220 Ceratophyllum demersum HOM05D007638 ORTHO05D009805 8.6e-48 194.5 211 54.5
PSO541G0423 Papaver somniferum HOM05D007638 ORTHO05D009805 9.5e-47 191.0 210 48.1
Aa31LG2G12650 Aethionema arabicum HOM05D007638 ORTHO05D009805 1.5e-44 183.7 190 45.3
arahy.Tifrunner.gnm1.ann1.E4IRCP Arachis hypogaea HOM05D007638 ORTHO05D009805 4.4e-44 182.2 157 56.1
ATR1153G083 Amborella trichopoda HOM05D007638 ORTHO05D009805 1.3e-43 180.6 199 45.7
THA.LOC104812781 Tarenaya hassleriana HOM05D007638 ORTHO05D009805 2.2e-43 179.9 198 43.9
Sp7g15100 Schrenkiella parvula HOM05D007638 ORTHO05D009805 4.9e-43 178.7 190 43.2
PGR031G3001 Punica granatum HOM05D007638 ORTHO05D009805 1.4e-42 177.2 211 49.8
SEGI_06661 Sequoiadendron giganteum HOM05D007638 ORTHO05D009805 5.1e-40 168.7 200 44.5
Aqoxy7G00749 Aquilegia oxysepala HOM05D007638 ORTHO05D009805 6.6e-40 168.3 158 50.6
Nitab4.5_0008481g0020 Nicotiana tabacum HOM05D007638 ORTHO05D009805 2.8e-38 162.9 191 46.6
SGA_v2.0_scaffold120G32873 Striga asiatica HOM05D007638 ORTHO05D009805 1.1e-37 161.0 195 45.6
CSS0011551 Camellia sinensis var. sinensis HOM05D007638 ORTHO05D009805 1.2e-36 157.5 104 69.2
vmacro00554 Vaccinium macrocarpon HOM05D007638 ORTHO05D009805 1.7e-35 153.7 105 65.7
Psat4g071600 Pisum sativum HOM05D007638 ORTHO05D009805 4.9e-35 152.1 137 53.3
ClCG01G003990 Citrullus lanatus HOM05D007638 ORTHO05D009805 1.3e-32 144.1 133 56.4
Nitab4.5_0000312g0180 Nicotiana tabacum HOM05D007638 ORTHO05D009805 1.3e-32 144.1 142 53.5
Pp3c9_14850 Physcomitrium patens HOM05D007638 ORTHO05D009805 2.5e-31 139.8 190 36.8
CBR_g20284 Chara braunii HOM05D007638 ORTHO05D009805 7.1e-26 121.7 194 32.0
AagrBONN_evm.TU.Sc2ySwM_228.4592 Anthoceros agrestis HOM05D007638 ORTHO05D009805 1.2e-25 120.9 149 43.6
Haze_07890 Corylus avellana HOM05D007638 ORTHO05D009805 4.5e-12 75.9 37 86.5


User provided reference genes

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