Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN04G2281 Fragaria x ananassa HOM05D000137 ORTHO05D198941 1.2e-67 259.6 125 100.0
FAN18G4209 Fragaria x ananassa HOM05D000137 ORTHO05D013326 1.8e-47 192.6 133 75.9
FvH4_5g19350 Fragaria vesca HOM05D000137 ORTHO05D013326 2.2e-45 185.7 134 73.9
FAN04G1257 Fragaria x ananassa HOM05D000137 ORTHO05D013326 3.6e-43 178.3 133 69.9
FAN08G0479 Fragaria x ananassa HOM05D000137 ORTHO05D013326 8.0e-43 177.2 133 69.9
FAN08G3364 Fragaria x ananassa HOM05D000137 ORTHO05D025520 2.3e-37 159.1 126 67.5
FAN18G4358 Fragaria x ananassa HOM05D000137 ORTHO05D013326 1.2e-35 153.3 130 64.6
FAN13G1380 Fragaria x ananassa HOM05D000137 ORTHO05D013326 6.1e-35 151.0 122 64.8
FAN04G1096 Fragaria x ananassa HOM05D000137 ORTHO05D013326 8.3e-32 140.6 107 72.9
FAN19G2075 Fragaria x ananassa HOM05D000137 ORTHO05D013326 1.3e-29 133.3 94 75.5
FvH4_5g19360 Fragaria vesca HOM05D000084 ORTHO05D013326 2.0e-25 119.4 58 96.6
FAN13G0132 Fragaria x ananassa HOM05D000137 ORTHO05D201312 4.6e-22 108.2 88 69.3
RcHm_v2.0_Chr7g0203821 Rosa chinensis HOM05D000137 ORTHO05D013326 6.8e-18 94.4 134 48.5
RcHm_v2.0_Chr7g0203861 Rosa chinensis HOM05D000137 ORTHO05D013326 6.8e-18 94.4 134 48.5
FAN18G3768 Fragaria x ananassa HOM05D000137 ORTHO05D025520 2.6e-17 92.4 137 46.7
FvH4_5g19340 Fragaria vesca HOM05D000137 ORTHO05D025520 3.4e-17 92.0 137 46.7
RcHm_v2.0_Chr2g0120471 Rosa chinensis HOM05D000137 ORTHO05D013326 1.7e-16 89.7 135 48.1
RcHm_v2.0_Chr2g0120711 Rosa chinensis HOM05D000137 ORTHO05D013326 1.1e-15 87.0 125 47.2
FvH4_2g16890 Fragaria vesca HOM05D000137 ORTHO05D046242 5.6e-12 74.7 111 45.0
FAN24G3386 Fragaria x ananassa HOM05D000137 ORTHO05D046242 5.6e-12 74.7 111 45.0
Ciclev10024050m.g Citrus clementina HOM05D000137 ORTHO05D002305 2.0e-09 66.2 111 40.5
Cc08_g05220 Coffea canephora HOM05D000137 ORTHO05D002305 1.3e-08 63.5 116 37.9
FAN04G0480 Fragaria x ananassa HOM05D000137 ORTHO05D025520 1.7e-08 63.2 104 43.3
MD04G1061700 Malus domestica HOM05D000137 ORTHO05D002305 1.7e-08 63.2 88 43.2
MD04G1058900 Malus domestica HOM05D000137 ORTHO05D002305 2.2e-08 62.8 103 37.9
Phvul.002G131400 Phaseolus vulgaris HOM05D000137 ORTHO05D002305 2.2e-08 62.8 112 36.6
Glyma.01G149000 Glycine max HOM05D000137 ORTHO05D002305 6.4e-08 61.2 112 35.7
Glyma.09G212900 Glycine max HOM05D000137 ORTHO05D002305 6.4e-08 61.2 112 35.7
FAN06G0115 Fragaria x ananassa HOM05D000137 ORTHO05D000290 8.3e-08 60.8 88 39.8
FAN06G4533 Fragaria x ananassa HOM05D000137 ORTHO05D002305 1.1e-07 60.5 88 39.8
GSVIVG01022771001 Vitis vinifera HOM05D000137 ORTHO05D002305 1.1e-07 60.5 88 40.9
Carub.0007s2205 Capsella rubella HOM05D000137 ORTHO05D002305 1.9e-07 59.7 112 36.6
CARHR225990 Cardamine hirsuta HOM05D000137 ORTHO05D002305 1.9e-07 59.7 115 36.5
BcaC01g00590 Brassica carinata HOM05D000137 ORTHO05D002305 2.4e-07 59.3 115 37.4
A08p14130 Brassica napus HOM05D000137 ORTHO05D002305 2.4e-07 59.3 115 37.4
C03p81710 Brassica napus HOM05D000137 ORTHO05D002305 2.4e-07 59.3 115 37.4
BolC3t20442H Brassica oleracea HOM05D000137 ORTHO05D002305 2.4e-07 59.3 88 42.0
BraA08t33407Z Brassica rapa HOM05D000137 ORTHO05D002305 2.4e-07 59.3 88 42.0
FvH4_7g27810 Fragaria vesca HOM05D000137 ORTHO05D002305 2.4e-07 59.3 88 38.6
Thecc.03G316900 Theobroma cacao HOM05D000137 ORTHO05D002305 5.4e-07 58.2 115 33.0
AL7G34980 Arabidopsis lyrata HOM05D000137 ORTHO05D002305 7.1e-07 57.8 88 39.8
AT4G19110 Arabidopsis thaliana HOM05D000137 ORTHO05D002305 7.1e-07 57.8 115 35.7
BcaB04g18521 Brassica carinata HOM05D000137 ORTHO05D002305 9.2e-07 57.4 115 36.5
Thhalv10000881m.g Eutrema salsugineum HOM05D000137 ORTHO05D002305 1.2e-06 57.0 88 42.0
A09p21800 Brassica napus HOM05D000137 ORTHO05D002305 1.6e-06 56.6 88 39.8
CARHR176640 Cardamine hirsuta HOM05D000137 ORTHO05D002305 1.6e-06 56.6 88 40.9
RcHm_v2.0_Chr7g0209011 Rosa chinensis HOM05D000137 ORTHO05D002305 1.6e-06 56.6 100 39.0
Sp2g10410 Schrenkiella parvula HOM05D000137 ORTHO05D002305 1.6e-06 56.6 88 39.8
Ciclev10018127m.g Citrus clementina HOM05D000137 ORTHO05D002305 2.7e-06 55.8 100 38.0
Sp7g17810 Schrenkiella parvula HOM05D000137 ORTHO05D002305 2.7e-06 55.8 115 34.8
BcaC04g21760 Brassica carinata HOM05D000137 ORTHO05D002305 3.5e-06 55.5 88 38.6
BcaNung03082 Brassica carinata HOM05D000137 ORTHO05D002305 3.5e-06 55.5 88 39.8
C07p50210 Brassica napus HOM05D000137 ORTHO05D002305 3.5e-06 55.5 88 39.8
C09p27910 Brassica napus HOM05D000137 ORTHO05D002305 3.5e-06 55.5 88 38.6
BraA03t14258Z Brassica rapa HOM05D000452 ORTHO05D000647 3.5e-06 55.5 88 39.8
Carub.0008s0267 Capsella rubella HOM05D000137 ORTHO05D002305 3.5e-06 55.5 88 39.8
PSO675G2842 Papaver somniferum HOM05D000137 ORTHO05D011786 3.5e-06 55.5 86 39.5
BcaC06g30616 Brassica carinata HOM05D000137 ORTHO05D002305 4.6e-06 55.1 88 39.8
BolC9t55654H Brassica oleracea HOM05D000137 ORTHO05D002305 4.6e-06 55.1 88 37.5
Ciclev10017752m.g Citrus clementina HOM05D000137 ORTHO05D002305 4.6e-06 55.1 100 39.0
THA.LOC104806970 Tarenaya hassleriana HOM05D000137 ORTHO05D002305 4.6e-06 55.1 88 38.6
SalBow8G1450 Salvia bowleyana HOM05D000137 ORTHO05D002305 6.0e-06 54.7 148 30.4
AL8G13360 Arabidopsis lyrata HOM05D000137 ORTHO05D002305 7.8e-06 54.3 88 38.6
AT5G45430 Arabidopsis thaliana HOM05D000137 ORTHO05D002305 7.8e-06 54.3 88 38.6
BolC7t45524H Brassica oleracea HOM05D000137 ORTHO05D002305 7.8e-06 54.3 127 34.6
Potri.003G190200 Populus trichocarpa HOM05D000137 ORTHO05D002305 7.8e-06 54.3 88 40.9


User provided reference genes

Program Settings