Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_5g36620 Fragaria vesca HOM05D006385 ORTHO05D007948 1.4e-47 192.6 96 100.0
FAN04G2124 Fragaria x ananassa HOM05D006385 ORTHO05D007948 1.4e-47 192.6 96 100.0
FAN08G3484 Fragaria x ananassa HOM05D000076 ORTHO05D002730 3.1e-47 191.4 96 99.0
RcHm_v2.0_Chr7g0242391 Rosa chinensis HOM05D006385 ORTHO05D007948 5.4e-47 190.7 96 99.0
FAN04G2677 Fragaria x ananassa HOM05D006385 ORTHO05D007948 2.0e-46 188.7 96 99.0
RcHm_v2.0_Chr7g0242491 Rosa chinensis HOM05D006385 ORTHO05D007948 2.3e-45 185.3 96 96.9
Aqoxy3G02613 Aquilegia oxysepala HOM05D006385 ORTHO05D007948 4.2e-44 181.0 96 92.7
Hma1.2p1_0593F.1_g185660 Hydrangea macrophylla HOM05D006385 ORTHO05D007948 5.5e-44 180.6 96 92.7
Prupe.1G522500 Prunus persica HOM05D006385 ORTHO05D007948 1.6e-43 179.1 96 90.6
Manes.18G064300 Manihot esculenta HOM05D006385 ORTHO05D007948 3.6e-43 177.9 96 91.7
Atru.chr13.1121 Acer truncatum HOM05D006385 ORTHO05D007948 6.1e-43 177.2 96 89.6
Eucgr.F00373 Eucalyptus grandis HOM05D006385 ORTHO05D007948 6.1e-43 177.2 96 90.6
CSS0041418 Camellia sinensis var. sinensis HOM05D006385 ORTHO05D007948 1.0e-42 176.4 96 89.6
MD15G1373900 Malus domestica HOM05D006385 ORTHO05D007948 1.0e-42 176.4 95 91.6
GSVIVG01009079001 Vitis vinifera HOM05D006385 ORTHO05D007948 1.0e-42 176.4 96 89.6
AUR62018967 Chenopodium quinoa HOM05D006385 ORTHO05D007948 2.3e-42 175.3 96 90.6
AUR62027809 Chenopodium quinoa HOM05D006385 ORTHO05D007948 2.3e-42 175.3 96 90.6
ClCG11G014260 Citrullus lanatus HOM05D006385 ORTHO05D007948 2.3e-42 175.3 96 88.5
Migut.C00083 Erythranthe guttata HOM05D006385 ORTHO05D007948 3.0e-42 174.9 96 89.6
QL02p002481 Quercus lobata HOM05D006385 ORTHO05D007948 3.0e-42 174.9 95 89.5
TAR629G0260 Trochodendron aralioides HOM05D006385 ORTHO05D007948 3.0e-42 174.9 96 85.4
CiPaw.16G033200 Carya illinoinensis HOM05D006385 ORTHO05D007948 4.0e-42 174.5 96 89.6
Potri.005G161900 Populus trichocarpa HOM05D006385 ORTHO05D007948 4.0e-42 174.5 96 86.5
Thecc.08G102700 Theobroma cacao HOM05D006385 ORTHO05D007948 4.0e-42 174.5 96 89.6
TWI56G0191 Tripterygium wilfordii HOM05D006385 ORTHO05D007948 4.0e-42 174.5 96 89.6
Sed0018010 Sechium edule HOM05D006385 ORTHO05D007948 8.9e-42 173.3 96 86.5
PSO063G4930 Papaver somniferum HOM05D006385 ORTHO05D007948 1.2e-41 172.9 96 87.5
PGR042G2954 Punica granatum HOM05D006385 ORTHO05D007948 2.0e-41 172.2 96 87.5
SalBow7G0771 Salvia bowleyana HOM05D006385 ORTHO05D007948 2.0e-41 172.2 96 84.4
CSS0028326 Camellia sinensis var. sinensis HOM05D006385 ORTHO05D007948 2.6e-41 171.8 96 86.5
Nn3g19220 Nelumbo nucifera HOM05D006385 ORTHO05D007948 3.4e-41 171.4 96 87.5
Nitab4.5_0010488g0040 Nicotiana tabacum HOM05D006385 ORTHO05D007948 3.4e-41 171.4 96 87.5
CAN.G857.10 Capsicum annuum HOM05D006385 ORTHO05D007948 4.4e-41 171.0 96 85.4
Sabra05G0122400 Salix brachista HOM05D000076 ORTHO05D007948 4.4e-41 171.0 96 85.4
CsaV3_3G047650 Cucumis sativus L. HOM05D006385 ORTHO05D007948 5.7e-41 170.6 96 85.4
PSO782G1429 Papaver somniferum HOM05D006385 ORTHO05D007948 5.7e-41 170.6 96 86.5
Duzib093G1818 Durio zibethinus HOM05D006385 ORTHO05D007948 7.5e-41 170.2 96 86.5
Peaxi162Scf00030g02222 Petunia axillaris HOM05D006385 ORTHO05D007948 7.5e-41 170.2 96 86.5
Glyma.14G177200 Glycine max HOM05D006385 ORTHO05D007948 9.8e-41 169.9 96 86.5
Gorai.010G038200 Gossypium raimondii HOM05D006385 ORTHO05D007948 9.8e-41 169.9 96 85.4
QL02p002520 Quercus lobata HOM05D006385 ORTHO05D007948 9.8e-41 169.9 95 87.4
Sc23g0000390 Simmondsia chinensis HOM05D006385 ORTHO05D007948 9.8e-41 169.9 96 85.4
Actinidia33123 Actinidia chinensis HOM05D006385 ORTHO05D007948 1.7e-40 169.1 96 85.4
Actinidia37405 Actinidia chinensis HOM05D006385 ORTHO05D007948 1.7e-40 169.1 96 85.4
Sopen04g029620 Solanum pennellii HOM05D006385 ORTHO05D007948 1.7e-40 169.1 96 85.4
PGSC0003DMG400030834 Solanum tuberosum HOM05D006385 ORTHO05D007948 1.7e-40 169.1 96 85.4
Medtr5g064610 Medicago truncatula HOM05D006385 ORTHO05D007948 2.2e-40 168.7 96 85.4
EL10Ac1g01150 Beta vulgaris HOM05D006385 ORTHO05D007948 2.8e-40 168.3 96 86.5
BcaC01g04743 Brassica carinata HOM05D006385 ORTHO05D007948 2.8e-40 168.3 96 84.4
A03p28350 Brassica napus HOM05D006385 ORTHO05D007948 2.8e-40 168.3 96 84.4
C03p34260 Brassica napus HOM05D006385 ORTHO05D007948 2.8e-40 168.3 96 84.4
BolC3t15735H Brassica oleracea HOM05D006385 ORTHO05D007948 2.8e-40 168.3 96 84.4
CANSAT25G3491 Cannabis sativa HOM05D006385 ORTHO05D007948 2.8e-40 168.3 96 84.4
DCAR_012886 Daucus carota HOM05D006385 ORTHO05D007948 2.8e-40 168.3 96 85.4
Thhalv10028739m.g Eutrema salsugineum HOM05D006385 ORTHO05D007948 2.8e-40 168.3 96 84.4
Phvul.008G176700 Phaseolus vulgaris HOM05D006385 ORTHO05D007948 2.8e-40 168.3 96 85.4
Sp6g08630 Schrenkiella parvula HOM05D006385 ORTHO05D007948 2.8e-40 168.3 96 84.4
Ciclev10001685m.g Citrus clementina HOM05D006385 ORTHO05D007948 3.7e-40 167.9 96 84.4
ECA247G1006 Erigeron canadensis HOM05D006385 ORTHO05D007948 3.7e-40 167.9 96 84.4
VMungo0647G2510 Vigna mungo HOM05D006385 ORTHO05D007948 3.7e-40 167.9 96 85.4
Cfa017889 Carpinus fangiana HOM05D006385 ORTHO05D007948 4.9e-40 167.5 96 84.4
Glyma.02G209000 Glycine max HOM05D006385 ORTHO05D007948 4.9e-40 167.5 96 85.4
BcaB01g02829 Brassica carinata HOM05D006385 ORTHO05D007948 6.3e-40 167.2 96 84.4
Gohir.A06G033800 Gossypium hirsutum HOM05D006385 ORTHO05D007948 6.3e-40 167.2 96 84.4
Lalb_Chr17g0344281 Lupinus albus HOM05D006385 ORTHO05D007948 6.3e-40 167.2 96 85.4
THA.LOC104813110 Tarenaya hassleriana HOM05D006385 ORTHO05D007948 6.3e-40 167.2 96 84.4
MSTRG.24988 Avicennia marina HOM05D006385 ORTHO05D007948 8.3e-40 166.8 96 85.4
Rhsim07G0205000 Rhododendron simsii HOM05D006385 ORTHO05D007948 8.3e-40 166.8 96 82.3
ATR0829G184 Amborella trichopoda HOM05D006385 ORTHO05D007948 1.1e-39 166.4 96 83.3
BraA03t12039Z Brassica rapa HOM05D006385 ORTHO05D007948 1.1e-39 166.4 96 83.3
COL.COLO4_12014 Corchorus olitorius HOM05D006385 ORTHO05D007948 1.8e-39 165.6 96 84.4
CDE11G0329 Ceratophyllum demersum HOM05D006385 ORTHO05D007948 2.4e-39 165.2 96 83.3
Lj1g0021451 Lotus japonicus HOM05D006385 ORTHO05D007948 2.4e-39 165.2 96 83.3
Carub.0006s2759 Capsella rubella HOM05D006385 ORTHO05D007948 3.2e-39 164.9 96 83.3
Haze_18272 Corylus avellana HOM05D006385 ORTHO05D007948 3.2e-39 164.9 96 82.3
Haze_18276 Corylus avellana HOM05D006385 ORTHO05D007948 3.2e-39 164.9 96 82.3
Gohir.D06G034700 Gossypium hirsutum HOM05D006385 ORTHO05D007948 3.2e-39 164.9 96 84.4
Aa31LG9G14680 Aethionema arabicum HOM05D006385 ORTHO05D007948 4.1e-39 164.5 96 81.2
AL6G41510 Arabidopsis lyrata HOM05D006385 ORTHO05D007948 4.1e-39 164.5 96 82.3
Solyc04g074640.4 Solanum lycopersicum HOM05D006385 ORTHO05D007948 4.1e-39 164.5 96 82.3
Ah.05g169700 Amaranthus hybridus HOM05D006385 ORTHO05D007948 5.4e-39 164.1 96 84.4
AT4G09010 Arabidopsis thaliana HOM05D006385 ORTHO05D007948 7.0e-39 163.7 96 83.3
Ca_05312_v3 Cicer arietinum L. HOM05D006385 ORTHO05D007948 9.2e-39 163.3 95 81.1
Lsat_1_v5_gn_1_3240 Lactuca sativa HOM05D006385 ORTHO05D007948 1.6e-38 162.5 96 81.2
CSS0032215 Camellia sinensis var. sinensis HOM05D006385 ORTHO05D007948 2.7e-38 161.8 96 84.4
TPR.G31376 Trifolium pratense HOM05D006385 ORTHO05D007948 2.7e-38 161.8 96 82.3
CARHR260020 Cardamine hirsuta HOM05D006385 ORTHO05D007948 3.5e-38 161.4 96 80.2
HanXRQChr05g0149631 Helianthus annuus HOM05D006385 ORTHO05D007948 3.5e-38 161.4 96 81.2
HPP92_021090 Vanilla planifolia HOM05D006385 ORTHO05D007948 5.9e-38 160.6 96 81.2
unitig_578.g16554 Utricularia gibba HOM05D006385 ORTHO05D007948 1.0e-37 159.8 87 89.7
Lj4A97T74 Lonicera japonica HOM05D006385 ORTHO05D007948 1.3e-37 159.5 96 81.2
Hund16889 Selenicereus undatus HOM05D006385 ORTHO05D007948 1.3e-37 159.5 110 75.5
vmacro04711 Vaccinium macrocarpon HOM05D006385 ORTHO05D007948 5.0e-37 157.5 133 64.7
arahy.Tifrunner.gnm1.ann1.5I6DN4 Arachis hypogaea HOM05D006385 ORTHO05D007948 1.5e-36 156.0 96 80.2
arahy.Tifrunner.gnm1.ann1.A6MVZL Arachis hypogaea HOM05D006385 ORTHO05D007948 1.5e-36 156.0 96 80.2
Zm00001eb071800 Zea mays HOM05D006385 ORTHO05D007948 1.9e-36 155.6 96 79.2
Nitab4.5_0000786g0090 Nicotiana tabacum HOM05D006385 ORTHO05D007948 1.6e-35 152.5 96 81.2
Os04g0602100 Oryza sativa ssp. japonica HOM05D006385 ORTHO05D007948 1.6e-35 152.5 96 78.1
Dinv44802 Davidia involucrata HOM05D006385 ORTHO05D007948 3.2e-31 138.3 78 85.9
CBR_g39625 Chara braunii HOM05D006385 ORTHO05D007948 1.3e-29 132.9 87 75.9
Pp3c1_18860 Physcomitrium patens HOM05D006385 ORTHO05D007948 9.5e-28 126.7 87 71.3
FAN04G3079 Fragaria x ananassa HOM05D006385 ORTHO05D007948 4.7e-27 124.4 63 96.8
FAN04G3219 Fragaria x ananassa HOM05D006385 ORTHO05D007948 4.7e-27 124.4 63 96.8
Pp3c2_15430 Physcomitrium patens HOM05D006385 ORTHO05D007948 1.4e-26 122.9 87 67.8
SMO331G0009 Selaginella moellendorffii HOM05D006385 ORTHO05D007948 1.2e-25 119.8 94 67.0
Mapoly0019s0014 Marchantia polymorpha HOM05D006385 ORTHO05D007948 2.6e-25 118.6 87 64.4
Cc10_g06720 Coffea canephora HOM05D006385 ORTHO05D007948 5.4e-23 110.9 59 88.1
SGA_v2.0_scaffold69G23149 Striga asiatica HOM05D006385 ORTHO05D007948 7.1e-23 110.5 67 77.6
AagrBONN_evm.TU.Sc2ySwM_368.1614 Anthoceros agrestis HOM05D006385 ORTHO05D007948 1.7e-21 105.9 83 59.0
vmacro04724 Vaccinium macrocarpon HOM05D006385 ORTHO05D007948 4.7e-19 97.8 66 72.7
Oeu029745.1 Olea europaea HOM05D006385 ORTHO05D007948 3.1e-18 95.1 80 63.8
SGA_v2.0_scaffold105G30294 Striga asiatica HOM05D006385 ORTHO05D007948 2.8e-11 72.0 44 75.0
Cc10_g06730 Coffea canephora HOM05D006385 ORTHO05D007948 6.8e-10 67.4 37 86.5
Cpa.g.sc36.176 Carica papaya HOM05D006385 ORTHO05D007948 2.9e-08 62.0 44 65.9


User provided reference genes

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