Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN04G2033 Fragaria x ananassa HOM05D006644 ORTHO05D008285 1.7e-171 605.9 304 100.0
FAN08G3361 Fragaria x ananassa HOM05D006644 ORTHO05D008285 6.7e-168 594.0 304 98.4
FvH4_5g00371 Fragaria vesca HOM05D006644 ORTHO05D008285 2.5e-167 592.0 304 98.0
RcHm_v2.0_Chr7g0202141 Rosa chinensis HOM05D006644 ORTHO05D008285 4.2e-162 574.7 304 95.7
MD04G1082000 Malus domestica HOM05D006644 ORTHO05D008285 3.3e-151 538.5 304 88.2
Prupe.5G076400 Prunus persica HOM05D006644 ORTHO05D008285 4.3e-151 538.1 304 89.5
CiPaw.12G106200 Carya illinoinensis HOM05D006644 ORTHO05D008285 1.2e-140 503.4 304 83.2
QL07p036208 Quercus lobata HOM05D006644 ORTHO05D008285 2.0e-140 502.7 303 82.8
CANSAT21G2263 Cannabis sativa HOM05D006644 ORTHO05D008285 6.5e-139 497.7 298 81.5
TWI81G0884 Tripterygium wilfordii HOM05D006644 ORTHO05D008285 2.5e-138 495.7 299 82.9
Atru.chr12.1357 Acer truncatum HOM05D006644 ORTHO05D008285 7.2e-138 494.2 299 82.6
Manes.02G035200 Manihot esculenta HOM05D006644 ORTHO05D008285 9.4e-138 493.8 299 81.3
Cfa012781 Carpinus fangiana HOM05D006644 ORTHO05D008285 2.1e-137 492.7 304 80.9
Haze_08586 Corylus avellana HOM05D006644 ORTHO05D008285 2.1e-137 492.7 304 81.2
Ciclev10024149m.g Citrus clementina HOM05D006644 ORTHO05D008285 1.8e-136 489.6 301 80.7
Potri.001G119700 Populus trichocarpa HOM05D006644 ORTHO05D008285 6.7e-136 487.6 299 81.6
CSS0029694 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 2.6e-135 485.7 304 79.6
TAR629G2969 Trochodendron aralioides HOM05D006644 ORTHO05D008285 4.4e-135 485.0 304 79.6
CSS0031485 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 5.7e-135 484.6 302 79.8
Thecc.03G258000 Theobroma cacao HOM05D006644 ORTHO05D008285 9.7e-135 483.8 298 81.9
Sabra01G0092400 Salix brachista HOM05D006644 ORTHO05D008285 1.3e-134 483.4 299 80.9
Gohir.A03G014500 Gossypium hirsutum HOM05D006644 ORTHO05D008285 3.7e-134 481.9 299 80.3
VMungo0720G3176 Vigna mungo HOM05D006644 ORTHO05D008285 4.8e-134 481.5 304 78.0
Lj2g0023084 Lotus japonicus HOM05D006644 ORTHO05D008285 8.2e-134 480.7 304 79.6
Aqoxy2G01551 Aquilegia oxysepala HOM05D006644 ORTHO05D008285 3.1e-133 478.8 304 79.3
Duzib068G0588 Durio zibethinus HOM05D006644 ORTHO05D008285 7.0e-133 477.6 298 80.9
Gohir.D03G160300 Gossypium hirsutum HOM05D006644 ORTHO05D008285 7.0e-133 477.6 300 79.3
DCAR_021556 Daucus carota HOM05D006644 ORTHO05D008285 9.1e-133 477.2 304 77.0
Sopen08g003400 Solanum pennellii HOM05D006644 ORTHO05D008285 9.1e-133 477.2 304 77.3
Cpa.g.sc29.104 Carica papaya HOM05D006644 ORTHO05D008285 1.2e-132 476.9 299 80.3
Gorai.003G168800 Gossypium raimondii HOM05D006644 ORTHO05D008285 1.2e-132 476.9 300 79.7
Nitab4.5_0004059g0010 Nicotiana tabacum HOM05D006644 ORTHO05D008285 1.2e-132 476.9 304 77.3
ClCG10G003030 Citrullus lanatus HOM05D006644 ORTHO05D008285 2.0e-132 476.1 304 78.9
Ca_06699_v3 Cicer arietinum L. HOM05D006644 ORTHO05D008285 2.6e-132 475.7 304 78.3
ECA232G2550 Erigeron canadensis HOM05D006644 ORTHO05D008285 2.6e-132 475.7 304 76.6
Hma1.2p1_0123F.1_g057970 Hydrangea macrophylla HOM05D006644 ORTHO05D008285 4.5e-132 474.9 297 78.1
Glyma.13G075600 Glycine max HOM05D006644 ORTHO05D008285 7.7e-132 474.2 304 77.6
CAN.G1394.30 Capsicum annuum HOM05D006644 ORTHO05D008285 1.3e-131 473.4 304 77.0
MELO3C013973.2 Cucumis melo HOM05D006644 ORTHO05D008285 1.3e-131 473.4 304 78.9
CsaV3_3G003070 Cucumis sativus L. HOM05D006644 ORTHO05D008285 1.3e-131 473.4 304 78.9
PGSC0003DMG400012507 Solanum tuberosum HOM05D006644 ORTHO05D008285 1.3e-131 473.4 304 77.0
Phvul.011G156400 Phaseolus vulgaris HOM05D006644 ORTHO05D008285 1.7e-131 473.0 304 77.3
Hund11575 Selenicereus undatus HOM05D006644 ORTHO05D008285 1.7e-131 473.0 304 77.3
MSTRG.22191 Avicennia marina HOM05D006644 ORTHO05D008285 2.2e-131 472.6 304 75.3
Medtr5g012060 Medicago truncatula HOM05D006644 ORTHO05D008285 2.2e-131 472.6 304 78.0
Lalb_Chr05g0214591 Lupinus albus HOM05D006644 ORTHO05D008285 3.8e-131 471.9 304 78.3
Solyc08g007440.2 Solanum lycopersicum HOM05D006644 ORTHO05D008285 5.0e-131 471.5 304 76.6
arahy.Tifrunner.gnm1.ann1.FSA67V Arachis hypogaea HOM05D006644 ORTHO05D008285 8.5e-131 470.7 304 77.0
arahy.Tifrunner.gnm1.ann1.TVS5XD Arachis hypogaea HOM05D006644 ORTHO05D008285 8.5e-131 470.7 304 77.0
Nitab4.5_0001707g0070 Nicotiana tabacum HOM05D006644 ORTHO05D008285 1.1e-130 470.3 304 76.3
Sed0006360 Sechium edule HOM05D006644 ORTHO05D008285 1.9e-130 469.5 304 77.6
Psat2g178760 Pisum sativum HOM05D006644 ORTHO05D008285 3.2e-130 468.8 304 77.6
TPR.G25884 Trifolium pratense HOM05D006644 ORTHO05D008285 7.2e-130 467.6 304 77.3
Oeu046413.1 Olea europaea HOM05D006644 ORTHO05D008285 3.0e-128 462.2 304 75.7
Oeu046415.1 Olea europaea HOM05D006644 ORTHO05D008285 3.0e-128 462.2 304 75.7
Cc08_g13030 Coffea canephora HOM05D006644 ORTHO05D008285 3.9e-128 461.8 304 75.3
Eucgr.E00462 Eucalyptus grandis HOM05D006644 ORTHO05D008285 2.0e-127 459.5 304 75.3
HanXRQChr16g0502401 Helianthus annuus HOM05D006644 ORTHO05D008285 2.6e-127 459.1 304 75.0
Lsat_1_v5_gn_4_110420 Lactuca sativa HOM05D006644 ORTHO05D008285 5.7e-127 458.0 300 75.7
Nn4g25799 Nelumbo nucifera HOM05D006644 ORTHO05D008285 9.7e-127 457.2 304 74.7
Lj3P740T25 Lonicera japonica HOM05D006644 ORTHO05D008285 2.8e-126 455.7 304 75.7
Sc01g0009310 Simmondsia chinensis HOM05D006644 ORTHO05D008285 5.3e-125 451.4 304 74.0
COL.COLO4_37229 Corchorus olitorius HOM05D000927 ORTHO05D000850 2.6e-124 449.1 278 81.3
A09p16050 Brassica napus HOM05D006644 ORTHO05D008285 6.5e-123 444.5 306 71.6
BraA09t37241Z Brassica rapa HOM05D006644 ORTHO05D008285 8.5e-123 444.1 306 71.2
BcaC04g22441 Brassica carinata HOM05D006644 ORTHO05D008285 1.1e-122 443.7 306 71.9
BolC9t54841H Brassica oleracea HOM05D006644 ORTHO05D008285 1.1e-122 443.7 306 71.9
Migut.E00967 Erythranthe guttata HOM05D006644 ORTHO05D008285 1.1e-122 443.7 304 73.4
C09p19300 Brassica napus HOM05D006644 ORTHO05D008285 1.5e-122 443.4 306 71.9
BcaB07g31354 Brassica carinata HOM05D006644 ORTHO05D008285 2.5e-122 442.6 306 71.6
CARHR049110 Cardamine hirsuta HOM05D006644 ORTHO05D008285 3.2e-122 442.2 304 72.0
Aa31LG2G270 Aethionema arabicum HOM05D006644 ORTHO05D008285 5.5e-122 441.4 304 71.4
unitig_0.g533 Utricularia gibba HOM05D006644 ORTHO05D008285 5.5e-122 441.4 304 72.4
AL2G13060 Arabidopsis lyrata HOM05D006644 ORTHO05D008285 7.2e-122 441.0 298 73.8
AT1G62730 Arabidopsis thaliana HOM05D006644 ORTHO05D008285 9.4e-122 440.7 304 72.4
THA.LOC104818444 Tarenaya hassleriana HOM05D006644 ORTHO05D008285 1.2e-121 440.3 301 72.4
Migut.E01682 Erythranthe guttata HOM05D006644 ORTHO05D008285 1.4e-120 436.8 304 72.7
Carub.0002s0225 Capsella rubella HOM05D006644 ORTHO05D008285 2.3e-120 436.0 304 71.4
Sp2g01910 Schrenkiella parvula HOM05D006644 ORTHO05D008285 4.0e-120 435.3 304 71.4
Thhalv10023606m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 6.8e-120 434.5 304 72.0
Actinidia05183 Actinidia chinensis HOM05D006644 ORTHO05D008285 1.3e-118 430.3 289 75.8
MBI05_g39054_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 8.3e-118 427.6 305 71.5
Actinidia27444 Actinidia chinensis HOM05D006644 ORTHO05D008285 1.4e-112 410.2 262 78.2
SGA_v2.0_scaffold13G06437 Striga asiatica HOM05D006644 ORTHO05D008285 2.3e-112 409.5 301 69.8
HPP92_012043 Vanilla planifolia HOM05D006644 ORTHO05D008285 1.2e-111 407.1 301 68.1
CDE05G2087 Ceratophyllum demersum HOM05D006644 ORTHO05D008285 2.0e-111 406.4 301 66.8
Os06g0104100 Oryza sativa ssp. japonica HOM05D006644 ORTHO05D008285 2.4e-109 399.4 303 66.0
Dinv39097 Davidia involucrata HOM05D006644 ORTHO05D008285 5.4e-109 398.3 247 81.0
ATR0789G127 Amborella trichopoda HOM05D006644 ORTHO05D008285 6.6e-107 391.3 304 65.8
Zm00001eb268550 Zea mays HOM05D006644 ORTHO05D008285 4.2e-106 388.7 301 64.8
GSVIVG01000849001 Vitis vinifera HOM05D006644 ORTHO05D008285 5.2e-104 381.7 266 72.9
SalBow7G1671 Salvia bowleyana HOM05D006644 ORTHO05D008285 7.0e-101 371.3 286 66.4
SEGI_03161 Sequoiadendron giganteum HOM05D006644 ORTHO05D008285 6.1e-97 358.2 305 59.7
AUR62010133 Chenopodium quinoa HOM05D006644 ORTHO05D008285 3.1e-96 355.9 242 72.3
Ah.12g056410 Amaranthus hybridus HOM05D000927 ORTHO05D000850 9.5e-90 334.3 230 72.6
SEGI_02663 Sequoiadendron giganteum HOM05D006644 ORTHO05D008285 9.5e-90 334.3 292 58.6
Lalb_Chr16g0379761 Lupinus albus HOM05D006644 ORTHO05D008285 5.2e-88 328.6 220 75.0
Peaxi162Scf00102g01130 Petunia axillaris HOM05D006644 ORTHO05D008285 2.0e-87 326.6 295 60.7
Zm00001eb268530 Zea mays HOM05D006644 ORTHO05D008285 3.2e-85 319.3 265 62.3
Zm00001eb201480 Zea mays HOM05D006644 ORTHO05D008285 5.1e-83 312.0 256 62.9
Pp3c14_3830 Physcomitrium patens HOM05D006644 ORTHO05D008285 6.6e-83 311.6 302 54.0
CSS0049876 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.2e-81 307.4 196 76.0
Mapoly0004s0255 Marchantia polymorpha HOM05D006644 ORTHO05D008285 1.4e-80 303.9 299 53.8
Thhalv10029515m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 1.4e-72 277.3 302 52.6
SMO358G0371 Selaginella moellendorffii HOM05D006644 ORTHO05D008285 3.1e-72 276.2 302 49.0
Zm00001eb270010 Zea mays HOM05D006644 ORTHO05D008285 1.4e-69 267.3 196 66.8
CBR_g24133 Chara braunii HOM05D006644 ORTHO05D008285 1.3e-65 254.2 311 45.3
ATR0789G122 Amborella trichopoda HOM05D006644 ORTHO05D008285 9.9e-63 244.6 214 62.6
CSS0012505 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 4.2e-53 212.6 143 75.5
CSS0030048 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 3.0e-51 206.5 144 74.3
CSS0030367 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 5.6e-50 202.2 144 72.2
QL12p014121 Quercus lobata HOM05D006644 ORTHO05D008285 4.8e-49 199.1 303 43.9
MCO14G155 Micromonas commoda HOM05D006644 ORTHO05D008285 6.9e-48 195.3 317 38.2
CSS0018627 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 4.2e-45 186.0 144 69.4
AagrBONN_evm.TU.Sc2ySwM_362.950 Anthoceros agrestis HOM05D006644 ORTHO05D008285 9.6e-42 174.9 164 50.6
Thhalv10022385m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 6.9e-40 168.7 115 70.4
Cre03.g194300 Chlamydomonas reinhardtii HOM05D006644 ORTHO05D008285 1.0e-38 164.9 364 31.6
CSS0020508 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 5.5e-37 159.1 91 80.2
PRCOL_00006235 Prasinoderma coloniale HOM05D006644 ORTHO05D008285 1.8e-35 154.1 319 33.9
BcaC06g31907 Brassica carinata HOM05D006644 ORTHO05D008285 1.6e-33 147.5 263 40.7
Cfa023787 Carpinus fangiana HOM05D006644 ORTHO05D008285 2.2e-30 137.1 338 31.7
MBI05_g43359_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 2.8e-25 120.2 80 75.0
MBI05_g43358_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 4.7e-12 76.3 43 81.4


User provided reference genes

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