Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN04G1764 Fragaria x ananassa HOM05D006459 ORTHO05D008414 2.2e-197 692.2 380 100.0
FvH4_5g33360 Fragaria vesca HOM05D006459 ORTHO05D008414 6.8e-186 654.1 380 90.0
RcHm_v2.0_Chr7g0232091 Rosa chinensis HOM05D006459 ORTHO05D008414 1.2e-171 606.7 384 83.9
MD08G1213000 Malus domestica HOM05D006459 ORTHO05D008414 3.4e-161 572.0 379 79.2
Prupe.1G544300 Prunus persica HOM05D006459 ORTHO05D008414 4.6e-158 561.6 379 78.6
Manes.18G118600 Manihot esculenta HOM05D006459 ORTHO05D008414 3.9e-149 531.9 383 73.6
Actinidia29387 Actinidia chinensis HOM05D006459 ORTHO05D008414 5.1e-149 531.6 375 73.9
AL6G43830 Arabidopsis lyrata HOM05D006459 ORTHO05D008414 2.1e-147 526.2 379 72.3
AT4G10050 Arabidopsis thaliana HOM05D006459 ORTHO05D008414 8.1e-147 524.2 378 72.5
Potri.019G072900 Populus trichocarpa HOM05D006459 ORTHO05D008414 1.1e-146 523.9 382 72.5
CiPaw.03G015900 Carya illinoinensis HOM05D006459 ORTHO05D008414 1.4e-146 523.5 380 71.6
Migut.C01370 Erythranthe guttata HOM05D006459 ORTHO05D008414 1.8e-146 523.1 378 72.0
Gorai.009G266900 Gossypium raimondii HOM05D006459 ORTHO05D008414 1.8e-146 523.1 374 74.3
Potri.013G099900 Populus trichocarpa HOM05D006459 ORTHO05D008414 4.0e-146 521.9 375 73.3
CiPaw.03G015700 Carya illinoinensis HOM05D006459 ORTHO05D008414 6.9e-146 521.2 380 71.6
Gohir.D05G255500 Gossypium hirsutum HOM05D006459 ORTHO05D008414 6.9e-146 521.2 375 73.9
Thecc.08G176900 Theobroma cacao HOM05D006459 ORTHO05D008414 9.0e-146 520.8 377 72.9
THA.LOC104815846 Tarenaya hassleriana HOM05D006459 ORTHO05D008414 1.2e-145 520.4 380 71.3
Sabra19G0084300 Salix brachista HOM05D006459 ORTHO05D008414 4.4e-145 518.5 308 83.1
Gohir.A05G253500 Gossypium hirsutum HOM05D006459 ORTHO05D008414 5.8e-145 518.1 374 73.8
Atru.chr13.2479 Acer truncatum HOM05D006459 ORTHO05D008414 1.3e-144 516.9 377 72.9
MSTRG.1592 Avicennia marina HOM05D006459 ORTHO05D008414 1.3e-144 516.9 382 71.5
BcaB01g02766 Brassica carinata HOM05D006459 ORTHO05D008414 2.2e-144 516.2 377 71.4
Aa31LG9G11940 Aethionema arabicum HOM05D006459 ORTHO05D008414 2.9e-144 515.8 376 72.1
Carub.0006s2860 Capsella rubella HOM05D006459 ORTHO05D008414 3.8e-144 515.4 376 71.5
CANSAT54G1068 Cannabis sativa HOM05D006459 ORTHO05D008414 4.9e-144 515.0 376 72.1
BcaC01g04692 Brassica carinata HOM05D006459 ORTHO05D008414 6.4e-144 514.6 377 71.1
BolC3t15799H Brassica oleracea HOM05D006459 ORTHO05D008414 6.4e-144 514.6 377 71.1
Sp6g07420 Schrenkiella parvula HOM05D006459 ORTHO05D008414 6.4e-144 514.6 377 71.6
BraA03t12083Z Brassica rapa HOM05D006459 ORTHO05D008414 8.4e-144 514.2 377 71.1
TWI75G0925 Tripterygium wilfordii HOM05D006459 ORTHO05D008414 8.4e-144 514.2 308 82.5
TAR628G1703 Trochodendron aralioides HOM05D006459 ORTHO05D008414 8.4e-144 514.2 376 71.8
GSVIVG01036383001 Vitis vinifera HOM05D006459 ORTHO05D008414 8.4e-144 514.2 374 72.2
CAN.G924.3 Capsicum annuum HOM05D006459 ORTHO05D008414 1.4e-143 513.5 377 71.4
Glyma.11G014000 Glycine max HOM05D006459 ORTHO05D008414 1.9e-143 513.1 382 70.2
Solyc11g042430.2 Solanum lycopersicum HOM05D006459 ORTHO05D008414 1.9e-143 513.1 377 71.4
Ciclev10020855m.g Citrus clementina HOM05D006459 ORTHO05D008414 2.4e-143 512.7 377 71.9
Thhalv10028776m.g Eutrema salsugineum HOM05D006459 ORTHO05D008414 3.2e-143 512.3 377 71.4
Sopen11g018500 Solanum pennellii HOM05D006459 ORTHO05D008414 5.4e-143 511.5 377 71.1
A03p28850 Brassica napus HOM05D006459 ORTHO05D008414 2.7e-142 509.2 377 70.6
C03p34880 Brassica napus HOM05D006459 ORTHO05D008414 3.5e-142 508.8 377 70.3
COL.COLO4_24570 Corchorus olitorius HOM05D006459 ORTHO05D008414 3.5e-142 508.8 320 81.6
Lsat_1_v5_gn_4_65220 Lactuca sativa HOM05D006459 ORTHO05D008414 4.6e-142 508.4 374 70.3
Cfa008090 Carpinus fangiana HOM05D006459 ORTHO05D008414 6.0e-142 508.1 380 70.5
CsaV3_5G040000 Cucumis sativus L. HOM05D006459 ORTHO05D008414 1.0e-141 507.3 372 72.0
Sed0024118 Sechium edule HOM05D006459 ORTHO05D008414 1.7e-141 506.5 371 72.5
CSS0029003 Camellia sinensis var. sinensis HOM05D006459 ORTHO05D008414 2.3e-141 506.1 379 70.2
LjContig00222g0004888 Lotus japonicus HOM05D006459 ORTHO05D008414 3.9e-141 505.4 367 71.1
Phvul.002G036200 Phaseolus vulgaris HOM05D006459 ORTHO05D008414 3.9e-141 505.4 382 69.6
Dinv09391 Davidia involucrata HOM05D006459 ORTHO05D008414 6.6e-141 504.6 379 70.7
Cpa.g.sc21.78 Carica papaya HOM05D006459 ORTHO05D008414 8.7e-141 504.2 365 72.6
HanXRQChr14g0455131 Helianthus annuus HOM05D006459 ORTHO05D008414 8.7e-141 504.2 373 70.8
ClCG08G001020 Citrullus lanatus HOM05D006459 ORTHO05D008414 1.5e-140 503.4 365 73.4
Oeu023200.3 Olea europaea HOM05D006459 ORTHO05D008414 2.5e-140 502.7 312 81.1
Psat2g187200 Pisum sativum HOM05D006459 ORTHO05D008414 3.3e-140 502.3 377 68.7
Eucgr.F02979 Eucalyptus grandis HOM05D006459 ORTHO05D008414 5.6e-140 501.5 368 72.3
VMungo1215G2765 Vigna mungo HOM05D006459 ORTHO05D008414 5.6e-140 501.5 378 69.3
Haze_13948 Corylus avellana HOM05D006459 ORTHO05D008414 9.6e-140 500.7 368 71.2
arahy.Tifrunner.gnm1.ann1.LVU4B6 Arachis hypogaea HOM05D006459 ORTHO05D008414 1.3e-139 500.4 381 68.2
Lalb_Chr09g0320511 Lupinus albus HOM05D006459 ORTHO05D008414 1.3e-139 500.4 351 71.2
Medtr5g008450 Medicago truncatula HOM05D006459 ORTHO05D008414 1.3e-139 500.4 377 68.7
MD15G1395500 Malus domestica HOM05D006459 ORTHO05D008414 2.1e-139 499.6 380 71.6
MBI03_g28420_MAGBIO Magnolia biondii HOM05D006459 ORTHO05D008414 3.6e-139 498.8 370 70.3
Ca_24473_v3 Cicer arietinum L. HOM05D006459 ORTHO05D008414 1.1e-138 497.3 377 68.7
ECA234G2100 Erigeron canadensis HOM05D006459 ORTHO05D008414 1.1e-138 497.3 309 80.3
EL10Ac1g01666 Beta vulgaris HOM05D006459 ORTHO05D008414 1.4e-138 496.9 379 69.4
Cc10_g08780 Coffea canephora HOM05D006459 ORTHO05D008414 2.0e-137 493.0 386 68.4
MELO3C022178.2 Cucumis melo HOM05D006459 ORTHO05D008414 3.4e-137 492.3 369 71.0
Aqoxy5G00842 Aquilegia oxysepala HOM05D006459 ORTHO05D008414 9.9e-137 490.7 352 72.2
TPR.G37896 Trifolium pratense HOM05D006459 ORTHO05D008414 9.9e-137 490.7 400 64.8
QL09p002119 Quercus lobata HOM05D006459 ORTHO05D008414 1.7e-136 490.0 377 69.2
SalBow7G1102 Salvia bowleyana HOM05D006459 ORTHO05D008414 2.9e-136 489.2 369 69.9
PSO170G3138 Papaver somniferum HOM05D006459 ORTHO05D008414 4.6e-134 481.9 376 67.8
Peaxi162Scf00078g00423 Petunia axillaris HOM05D006459 ORTHO05D008414 1.8e-133 479.9 308 78.6
HPP92_005641 Vanilla planifolia HOM05D006459 ORTHO05D008414 1.1e-132 477.2 307 76.5
PSO017G7078 Papaver somniferum HOM05D006459 ORTHO05D008414 2.8e-131 472.6 375 66.1
PGR042G0716 Punica granatum HOM05D006459 ORTHO05D008414 2.8e-131 472.6 372 65.3
ATR1089G027 Amborella trichopoda HOM05D006459 ORTHO05D008414 5.8e-129 464.9 371 65.5
Nitab4.5_0000903g0050 Nicotiana tabacum HOM05D006459 ORTHO05D008414 7.6e-129 464.5 379 66.2
unitig_8.g4894 Utricularia gibba HOM05D006459 ORTHO05D008414 3.2e-127 459.1 375 64.8
Os04g0443500 Oryza sativa ssp. japonica HOM05D006459 ORTHO05D008414 1.3e-125 453.8 301 74.1
TWI12G1446 Tripterygium wilfordii HOM05D006459 ORTHO05D008414 3.9e-125 452.2 263 85.9
Zm00001eb082080 Zea mays HOM05D006459 ORTHO05D008414 6.9e-122 441.4 307 71.3
Pp3c6_4660 Physcomitrium patens HOM05D006459 ORTHO05D008414 5.8e-121 438.3 306 68.6
AagrBONN_evm.TU.Sc2ySwM_117.506 Anthoceros agrestis HOM05D006459 ORTHO05D008414 6.7e-117 424.9 352 60.2
Nitab4.5_0000999g0010 Nicotiana tabacum HOM05D006459 ORTHO05D008414 2.8e-115 419.5 379 62.0
AUR62034346 Chenopodium quinoa HOM05D006459 ORTHO05D008414 3.7e-115 419.1 255 80.8
Mapoly0007s0278 Marchantia polymorpha HOM05D006459 ORTHO05D008414 1.5e-113 413.7 307 64.5
SMO356G0681 Selaginella moellendorffii HOM05D006459 ORTHO05D008414 4.5e-113 412.1 304 65.1
Nitab4.5_0003013g0010 Nicotiana tabacum HOM05D006459 ORTHO05D008414 2.9e-104 382.9 379 58.3
arahy.Tifrunner.gnm1.ann1.K3NID2 Arachis hypogaea HOM05D006459 ORTHO05D008414 3.8e-104 382.5 428 53.3
Duzib268G1319 Durio zibethinus HOM05D006459 ORTHO05D008414 1.6e-102 377.1 376 58.0
DCAR_017359 Daucus carota HOM05D006459 ORTHO05D008414 6.1e-102 375.2 229 80.8
SGA_v2.0_scaffold118G32601 Striga asiatica HOM05D006459 ORTHO05D008414 2.3e-101 373.2 372 59.1
Lj9A698G57 Lonicera japonica HOM05D006459 ORTHO05D008414 1.8e-98 363.6 366 58.5
Sc25g0003010 Simmondsia chinensis HOM05D006459 ORTHO05D008414 1.5e-97 360.5 222 80.6
Rhsim02G0145500 Rhododendron simsii HOM05D006459 ORTHO05D008414 4.2e-95 352.4 555 43.8
Nn5g27277 Nelumbo nucifera HOM05D006459 ORTHO05D008414 2.0e-92 343.6 278 67.3
Hma1.2p1_0074F.1_g039070 Hydrangea macrophylla HOM05D006459 ORTHO05D008414 1.9e-87 327.0 274 65.0
SHI16717 Sapria himalayana HOM05D006459 ORTHO05D008414 2.7e-81 306.6 291 57.7
Hma1.2p1_0074F.1_g039080 Hydrangea macrophylla HOM05D006459 ORTHO05D008414 1.6e-73 280.8 167 81.4
vmacro16046 Vaccinium macrocarpon HOM05D006459 ORTHO05D008414 5.2e-69 265.8 177 76.8
CBR_g45928 Chara braunii HOM05D006459 ORTHO05D008414 2.0e-65 253.8 220 56.4
Cre12.g521250 Chlamydomonas reinhardtii HOM05D006459 ORTHO05D008414 3.9e-64 249.6 364 39.8
Haze_26337 Corylus avellana HOM05D006459 ORTHO05D008414 3.4e-60 236.5 314 43.6
HPP92_005619 Vanilla planifolia HOM05D006459 ORTHO05D008414 1.1e-55 221.5 130 82.3
Glyma.01G230800 Glycine max HOM05D006459 ORTHO05D008414 1.0e-48 198.4 127 78.0
MCO04G089 Micromonas commoda HOM05D006459 ORTHO05D008414 2.3e-45 187.2 323 38.1
PRCOL_00002994 Prasinoderma coloniale HOM05D006459 ORTHO05D008414 2.6e-44 183.7 347 34.9
SEGI_15073 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 6.4e-43 179.1 126 73.0
HPP92_005618 Vanilla planifolia HOM05D006459 ORTHO05D008414 3.3e-39 166.8 97 81.4
SMO272G0012 Selaginella moellendorffii HOM05D006459 ORTHO05D008414 1.8e-37 161.0 100 69.0
vmacro16045 Vaccinium macrocarpon HOM05D006459 ORTHO05D008414 5.4e-34 149.4 84 85.7
FAN08G1548 Fragaria x ananassa HOM05D006459 ORTHO05D008414 9.0e-29 132.1 65 96.9
CBR_g27970 Chara braunii HOM05D006459 ORTHO05D008414 2.1e-25 120.9 83 67.5
Nn179s44626 Nelumbo nucifera HOM05D006459 ORTHO05D008414 3.9e-16 90.1 56 85.7
SEGI_06082 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 5.1e-16 89.7 76 59.2
SEGI_00088 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 1.1e-10 72.0 44 68.2
Lsat_1_v5_gn_2_49420 Lactuca sativa HOM05D006459 ORTHO05D008414 8.2e-06 55.8 30 83.3


User provided reference genes

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