Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN04G1730 Fragaria x ananassa HOM05D006202 ORTHO05D008227 6.6e-218 760.4 373 100.0
FAN08G1924 Fragaria x ananassa HOM05D006202 ORTHO05D008227 2.0e-214 748.8 373 97.9
FvH4_5g30330 Fragaria vesca HOM05D006202 ORTHO05D008227 4.4e-214 747.7 373 98.1
FAN13G0191 Fragaria x ananassa HOM05D006202 ORTHO05D008227 1.1e-212 743.0 373 97.6
FAN18G2168 Fragaria x ananassa HOM05D006202 ORTHO05D008227 2.5e-201 705.3 347 98.6
RcHm_v2.0_Chr1g0313251 Rosa chinensis HOM05D006202 ORTHO05D008227 9.6e-193 676.8 397 85.1
Prupe.1G561800 Prunus persica HOM05D006202 ORTHO05D008227 6.7e-178 627.5 346 86.4
MD02G1319400 Malus domestica HOM05D006202 ORTHO05D008227 7.4e-177 624.0 347 85.6
Manes.10G152100 Manihot esculenta HOM05D006202 ORTHO05D008227 1.8e-175 619.4 357 84.0
TWI73G0821 Tripterygium wilfordii HOM05D006202 ORTHO05D008227 2.4e-175 619.0 345 85.2
CSS0029964 Camellia sinensis var. sinensis HOM05D006202 ORTHO05D008227 5.3e-175 617.8 345 86.1
Potri.009G024100 Populus trichocarpa HOM05D006202 ORTHO05D008227 2.0e-174 615.9 345 86.4
Actinidia21584 Actinidia chinensis HOM05D006202 ORTHO05D008227 3.4e-174 615.1 364 82.1
QL04p001552 Quercus lobata HOM05D006202 ORTHO05D008227 1.3e-173 613.2 350 83.4
Dinv43939 Davidia involucrata HOM05D006202 ORTHO05D008227 1.7e-173 612.8 346 84.4
Cc02_g26930 Coffea canephora HOM05D006202 ORTHO05D008227 2.9e-173 612.1 334 87.4
TAR369G0651 Trochodendron aralioides HOM05D006202 ORTHO05D008227 2.9e-173 612.1 345 84.1
Glyma.15G268400 Glycine max HOM05D006202 ORTHO05D008227 4.9e-173 611.3 348 83.0
vmacro21164 Vaccinium macrocarpon HOM05D006202 ORTHO05D008227 2.5e-172 609.0 345 84.6
Glyma.08G157800 Glycine max HOM05D006202 ORTHO05D008227 3.2e-172 608.6 357 81.0
CiPaw.02G012300 Carya illinoinensis HOM05D006202 ORTHO05D008227 5.5e-172 607.8 346 83.5
Aqoxy1G00030 Aquilegia oxysepala HOM05D006202 ORTHO05D008227 1.6e-171 606.3 345 83.5
Medtr2g061710 Medicago truncatula HOM05D006202 ORTHO05D008227 3.5e-171 605.1 365 81.4
GSVIVG01001357001 Vitis vinifera HOM05D006202 ORTHO05D008227 3.5e-171 605.1 327 87.5
Cfa010710 Carpinus fangiana HOM05D006202 ORTHO05D008227 4.6e-171 604.7 345 83.5
Lj9C620G10 Lonicera japonica HOM05D006202 ORTHO05D008227 1.0e-170 603.6 345 84.1
Rhsim03G0068600 Rhododendron simsii HOM05D006202 ORTHO05D008227 1.3e-170 603.2 361 81.4
Lj3g0005275 Lotus japonicus HOM05D006202 ORTHO05D008227 2.3e-170 602.4 356 81.5
TPR.G16148 Trifolium pratense HOM05D006202 ORTHO05D008227 6.7e-170 600.9 368 80.2
arahy.Tifrunner.gnm1.ann1.03K86Q Arachis hypogaea HOM05D006202 ORTHO05D008227 8.7e-170 600.5 356 80.9
Haze_03268 Corylus avellana HOM05D006202 ORTHO05D008227 8.7e-170 600.5 355 81.4
arahy.Tifrunner.gnm1.ann1.Y9YBLC Arachis hypogaea HOM05D006202 ORTHO05D008227 1.1e-169 600.1 356 80.9
Ca_03201_v3 Cicer arietinum L. HOM05D006202 ORTHO05D008227 1.5e-169 599.7 347 83.3
Cpa.g.sc189.4 Carica papaya HOM05D006202 ORTHO05D008227 2.5e-169 599.0 346 83.5
SalBow5G5675 Salvia bowleyana HOM05D006202 ORTHO05D008227 2.5e-169 599.0 345 83.2
Atru.chr11.2704 Acer truncatum HOM05D006202 ORTHO05D008227 3.3e-169 598.6 363 80.4
MBI04_g33961_MAGBIO Magnolia biondii HOM05D006202 ORTHO05D008227 3.3e-169 598.6 344 82.8
ClCG09G003710 Citrullus lanatus HOM05D006202 ORTHO05D008227 5.7e-169 597.8 345 82.9
Aa31LG5G5070 Aethionema arabicum HOM05D006202 ORTHO05D008227 7.4e-169 597.4 345 82.6
Nn2g15679 Nelumbo nucifera HOM05D006202 ORTHO05D008227 7.4e-169 597.4 345 82.9
Oeu060701.1 Olea europaea HOM05D006202 ORTHO05D008227 7.4e-169 597.4 364 80.5
Migut.B01400 Erythranthe guttata HOM05D006202 ORTHO05D008227 1.3e-168 596.7 346 82.4
THA.LOC104815880 Tarenaya hassleriana HOM05D006202 ORTHO05D008227 1.3e-168 596.7 345 82.6
Phvul.005G042000 Phaseolus vulgaris HOM05D006202 ORTHO05D008227 1.6e-168 596.3 337 84.3
PSO384G0467 Papaver somniferum HOM05D006202 ORTHO05D008227 2.1e-168 595.9 335 84.2
Sed0014986 Sechium edule HOM05D006202 ORTHO05D008227 2.1e-168 595.9 346 82.1
Lsat_1_v5_gn_4_46560 Lactuca sativa HOM05D006202 ORTHO05D008227 2.8e-168 595.5 338 82.2
VMungo1080G0924 Vigna mungo HOM05D006202 ORTHO05D008227 3.7e-168 595.1 346 82.4
Nitab4.5_0010722g0010 Nicotiana tabacum HOM05D006202 ORTHO05D008227 6.3e-168 594.3 346 81.8
PSO339G0702 Papaver somniferum HOM05D006202 ORTHO05D008227 8.2e-168 594.0 335 83.9
Sc10g0005310 Simmondsia chinensis HOM05D006202 ORTHO05D008227 8.2e-168 594.0 344 82.0
Lalb_Chr01g0015151 Lupinus albus HOM05D006202 ORTHO05D008227 1.4e-167 593.2 344 82.0
Nitab4.5_0000468g0040 Nicotiana tabacum HOM05D006202 ORTHO05D008227 2.4e-167 592.4 346 81.8
Thhalv10016791m.g Eutrema salsugineum HOM05D006202 ORTHO05D008227 3.1e-167 592.0 332 84.6
Peaxi162Scf00402g00616 Petunia axillaris HOM05D006202 ORTHO05D008227 3.1e-167 592.0 346 81.2
arahy.Tifrunner.gnm1.ann1.YK6119 Arachis hypogaea HOM05D006202 ORTHO05D008227 6.9e-167 590.9 356 79.8
Thecc.09G200100 Theobroma cacao HOM05D006202 ORTHO05D008227 6.9e-167 590.9 335 83.3
ATR0605G327 Amborella trichopoda HOM05D006202 ORTHO05D008227 9.0e-167 590.5 352 79.8
ECA234G4350 Erigeron canadensis HOM05D006202 ORTHO05D008227 9.0e-167 590.5 332 83.7
PGSC0003DMG401028974 Solanum tuberosum HOM05D006202 ORTHO05D008227 1.2e-166 590.1 346 81.5
BcaC01g05926 Brassica carinata HOM05D006202 ORTHO05D008227 1.5e-166 589.7 374 76.5
BraA03t11059Z Brassica rapa HOM05D006202 ORTHO05D008227 1.5e-166 589.7 374 77.3
Migut.I00539 Erythranthe guttata HOM05D006202 ORTHO05D008227 1.5e-166 589.7 368 77.7
Sopen01g033340 Solanum pennellii HOM05D006202 ORTHO05D008227 2.0e-166 589.3 358 78.8
Phvul.005G041900 Phaseolus vulgaris HOM05D006202 ORTHO05D008227 2.6e-166 589.0 327 85.6
Carub.0004s1327 Capsella rubella HOM05D006202 ORTHO05D008227 3.4e-166 588.6 332 83.7
AT2G31955 Arabidopsis thaliana HOM05D006202 ORTHO05D008227 4.5e-166 588.2 332 83.1
Sabra09G0015400 Salix brachista HOM05D006202 ORTHO05D008227 4.5e-166 588.2 400 74.0
SGA_v2.0_scaffold5G03106 Striga asiatica HOM05D006202 ORTHO05D008227 4.5e-166 588.2 372 78.0
CAN.G129.48 Capsicum annuum HOM05D006202 ORTHO05D008227 5.9e-166 587.8 345 80.6
Sp4g14320 Schrenkiella parvula HOM05D006202 ORTHO05D008227 7.6e-166 587.4 334 82.9
AL4G27290 Arabidopsis lyrata HOM05D006202 ORTHO05D008227 2.9e-165 585.5 332 82.8
Eucgr.A00275 Eucalyptus grandis HOM05D006202 ORTHO05D008227 5.0e-165 584.7 345 80.9
BolC3t14483H Brassica oleracea HOM05D006202 ORTHO05D008227 6.5e-165 584.3 375 76.0
Solyc01g073730.4 Solanum lycopersicum HOM05D006202 ORTHO05D008227 8.5e-165 583.9 358 78.2
Ciclev10031726m.g Citrus clementina HOM05D006202 ORTHO05D008227 2.5e-164 582.4 359 78.6
Eucgr.A00079 Eucalyptus grandis HOM05D006202 ORTHO05D008227 2.5e-164 582.4 353 79.6
MSTRG.28100 Avicennia marina HOM05D006202 ORTHO05D008227 7.2e-164 580.9 345 81.2
Gohir.D08G018900 Gossypium hirsutum HOM05D006202 ORTHO05D008227 9.3e-164 580.5 335 82.1
Gorai.004G013400 Gossypium raimondii HOM05D006202 ORTHO05D008227 9.3e-164 580.5 335 82.4
Ah.14g085700 Amaranthus hybridus HOM05D006202 ORTHO05D008227 1.6e-163 579.7 355 77.2
Os02g0258900 Oryza sativa ssp. japonica HOM05D006202 ORTHO05D008227 1.6e-163 579.7 348 77.6
Gohir.A08G008900 Gossypium hirsutum HOM05D006202 ORTHO05D008227 4.6e-163 578.2 335 81.2
HanXRQChr16g0520351 Helianthus annuus HOM05D006202 ORTHO05D008227 4.6e-163 578.2 332 81.3
AUR62036652 Chenopodium quinoa HOM05D006202 ORTHO05D008227 1.3e-162 576.6 352 77.6
Duzib168G0949 Durio zibethinus HOM05D006202 ORTHO05D008227 1.3e-162 576.6 335 81.5
Os12g0507000 Oryza sativa ssp. japonica HOM05D006202 ORTHO05D008227 2.3e-162 575.9 361 75.6
AUR62034625 Chenopodium quinoa HOM05D006202 ORTHO05D008227 3.0e-162 575.5 352 77.6
CsaV3_7G031490 Cucumis sativus L. HOM05D006202 ORTHO05D008227 5.1e-162 574.7 318 85.2
Zm00001eb244230 Zea mays HOM05D006202 ORTHO05D008227 5.1e-162 574.7 373 74.5
COL.COLO4_07529 Corchorus olitorius HOM05D006202 ORTHO05D008227 3.3e-161 572.0 347 79.0
DCAR_001807 Daucus carota HOM05D006202 ORTHO05D008227 3.3e-161 572.0 345 78.6
CANSAT80G0703 Cannabis sativa HOM05D006202 ORTHO05D008227 5.9e-158 561.2 349 77.4
EL10Ac3g06182 Beta vulgaris HOM05D006202 ORTHO05D008227 1.0e-157 560.5 346 76.3
unitig_749.g13486 Utricularia gibba HOM05D006202 ORTHO05D008227 1.4e-156 556.6 364 74.2
HPP92_023784 Vanilla planifolia HOM05D006202 ORTHO05D008227 8.8e-154 547.4 346 76.0
C03p21020 Brassica napus HOM05D000200 ORTHO05D000262 1.7e-149 533.1 351 74.4
A03p17940 Brassica napus HOM05D000200 ORTHO05D000262 6.5e-149 531.2 351 74.1
SEGI_40145 Sequoiadendron giganteum HOM05D006202 ORTHO05D008227 1.3e-144 516.9 346 72.8
SMO361G0213 Selaginella moellendorffii HOM05D006202 ORTHO05D008227 4.1e-143 511.9 330 73.3
Pp3c5_22480 Physcomitrium patens HOM05D006202 ORTHO05D008227 1.6e-142 510.0 335 70.4
Mapoly0045s0149 Marchantia polymorpha HOM05D006202 ORTHO05D008227 1.3e-141 506.9 337 72.1
CDE06G1615 Ceratophyllum demersum HOM05D006202 ORTHO05D008227 2.5e-140 502.7 345 71.6
Actinidia15848 Actinidia chinensis HOM05D006202 ORTHO05D008227 6.1e-139 498.0 359 71.3
CBR_g36677 Chara braunii HOM05D006202 ORTHO05D008227 6.3e-136 488.0 361 64.5
Potri.001G230604 Populus trichocarpa HOM05D006202 ORTHO05D008227 6.1e-131 471.5 345 70.4
arahy.Tifrunner.gnm1.ann1.JS3HL2 Arachis hypogaea HOM05D006202 ORTHO05D008227 3.7e-128 462.2 347 67.1
AL80U10060 Arabidopsis lyrata HOM05D006202 ORTHO05D008227 1.2e-123 447.2 332 68.1
MCO15G349 Micromonas commoda HOM05D006202 ORTHO05D008227 4.4e-121 438.7 329 63.2
Cre13.g602901 Chlamydomonas reinhardtii HOM05D006202 ORTHO05D008227 8.0e-115 417.9 376 57.2
TAR369G1105 Trochodendron aralioides HOM05D006202 ORTHO05D008227 9.8e-113 411.0 233 82.8
MELO3C023505.2 Cucumis melo HOM05D006202 ORTHO05D008227 1.3e-109 400.6 230 82.2
PRCOL_00002201 Prasinoderma coloniale HOM05D006202 ORTHO05D008227 1.3e-109 400.6 331 57.7
CARHR125690 Cardamine hirsuta HOM05D006202 ORTHO05D008227 4.3e-108 395.6 217 85.7
Psat1g128920 Pisum sativum HOM05D006202 ORTHO05D008227 4.3e-108 395.6 254 76.4
Hund12940 Selenicereus undatus HOM05D006202 ORTHO05D008227 5.6e-108 395.2 231 79.7
Pp3c6_6420 Physcomitrium patens HOM05D006202 ORTHO05D008227 4.9e-104 382.1 327 58.1
Cfa022704 Carpinus fangiana HOM05D006202 ORTHO05D008227 2.3e-98 363.2 371 49.9
Haze_27006 Corylus avellana HOM05D006202 ORTHO05D008699 1.0e-69 268.1 287 45.6
SHI12244 Sapria himalayana HOM05D006202 ORTHO05D008227 4.8e-67 259.2 190 68.4
SHI12251 Sapria himalayana HOM05D006202 ORTHO05D008227 8.1e-67 258.5 166 74.1
AagrBONN_evm.TU.Sc2ySwM_344.4902 Anthoceros agrestis HOM05D006202 ORTHO05D008227 5.1e-61 239.2 164 68.9
SHI12245 Sapria himalayana HOM05D006202 ORTHO05D008227 6.9e-50 202.2 201 56.2
ATR0605G108 Amborella trichopoda HOM05D006202 ORTHO05D008227 5.0e-48 196.1 131 72.5
A05p13580 Brassica napus HOM05D006202 ORTHO05D033532 3.2e-15 87.0 90 52.2
BraA05t20295Z Brassica rapa HOM05D006202 ORTHO05D033532 3.2e-15 87.0 90 52.2
SHI34064 Sapria himalayana HOM05D006202 ORTHO05D367267 3.2e-15 87.0 59 74.6
TAR623G0116 Trochodendron aralioides HOM05D006202 ORTHO05D414173 1.6e-09 68.2 35 80.0


User provided reference genes

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