Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN04G1722 Fragaria x ananassa HOM05D004520 ORTHO05D005520 9.4e-148 526.9 287 100.0
FAN13G2359 Fragaria x ananassa HOM05D004520 ORTHO05D005520 7.5e-137 490.7 287 90.6
FvH4_5g38140 Fragaria vesca HOM05D004520 ORTHO05D000031 7.8e-134 480.7 287 93.7
FAN18G4472 Fragaria x ananassa HOM05D004520 ORTHO05D005520 1.0e-133 480.3 287 93.4
FAN08G3230 Fragaria x ananassa HOM05D004520 ORTHO05D005520 1.2e-131 473.4 287 92.3
RcHm_v2.0_Chr7g0240121 Rosa chinensis HOM05D004520 ORTHO05D005520 2.3e-77 293.1 242 72.7
Prupe.1G510900 Prunus persica HOM05D004520 ORTHO05D005520 9.1e-50 201.4 278 52.5
MD15G1363200 Malus domestica HOM05D004520 ORTHO05D005520 4.5e-49 199.1 297 51.2
MD15G1408400 Malus domestica HOM05D004520 ORTHO05D005520 4.5e-41 172.6 311 46.3
Prupe.1G552400 Prunus persica HOM05D004520 ORTHO05D005520 1.5e-39 167.5 254 50.0
Potri.005G166900 Populus trichocarpa HOM05D004520 ORTHO05D005520 2.5e-39 166.8 263 43.3
Cfa015929 Carpinus fangiana HOM05D004520 ORTHO05D005520 3.2e-39 166.4 215 47.0
MD08G1176500 Malus domestica HOM05D004520 ORTHO05D005520 3.2e-39 166.4 165 58.2
Potri.002G092000 Populus trichocarpa HOM05D004520 ORTHO05D005520 4.7e-38 162.5 267 46.8
Haze_00561 Corylus avellana HOM05D004520 ORTHO05D005520 9.7e-36 154.8 225 40.9
Sabra05G0127200 Salix brachista HOM05D004520 ORTHO05D005520 1.4e-34 151.0 288 39.9
QL12p035753 Quercus lobata HOM05D004520 ORTHO05D005520 4.1e-34 149.4 218 45.9
C05p21170 Brassica napus HOM05D004520 ORTHO05D005520 7.0e-34 148.7 165 53.3
BolC5t30811H Brassica oleracea HOM05D004520 ORTHO05D005520 7.0e-34 148.7 165 53.3
A09p42670 Brassica napus HOM05D004520 ORTHO05D005520 9.1e-34 148.3 174 51.7
BraA09t39742Z Brassica rapa HOM05D004520 ORTHO05D005520 9.1e-34 148.3 174 51.7
BcaC05g26135 Brassica carinata HOM05D004520 ORTHO05D005520 2.7e-33 146.7 172 50.6
Duzib093G1357 Durio zibethinus HOM05D004520 ORTHO05D005520 2.7e-33 146.7 252 40.5
Duzib041G0092 Durio zibethinus HOM05D004520 ORTHO05D005520 4.5e-33 146.0 272 38.2
A07p14760 Brassica napus HOM05D004520 ORTHO05D005520 5.9e-33 145.6 145 56.6
Duzib041G0365 Durio zibethinus HOM05D004520 ORTHO05D005520 1.0e-32 144.8 269 38.7
BcaB07g32230 Brassica carinata HOM05D004520 ORTHO05D005520 1.7e-32 144.1 163 50.9
BolC7t42702H Brassica oleracea HOM05D004520 ORTHO05D005520 2.2e-32 143.7 161 54.7
MD08G1219800 Malus domestica HOM05D004520 ORTHO05D005520 2.2e-32 143.7 278 46.4
Thecc.08G113300 Theobroma cacao HOM05D004520 ORTHO05D005520 2.9e-32 143.3 274 39.1
BcaB03g14234 Brassica carinata HOM05D004520 ORTHO05D005520 3.8e-32 142.9 161 51.6
Duzib116G0626 Durio zibethinus HOM05D004520 ORTHO05D005520 5.0e-32 142.5 275 39.3
Aa31LG7G6090 Aethionema arabicum HOM05D004520 ORTHO05D005520 1.5e-31 141.0 137 57.7
BraA07t29221Z Brassica rapa HOM05D004520 ORTHO05D005520 2.5e-31 140.2 134 58.2
CANSAT25G0040 Cannabis sativa HOM05D004520 ORTHO05D005520 3.2e-31 139.8 129 55.8
CARHR022460 Cardamine hirsuta HOM05D004520 ORTHO05D005520 4.2e-31 139.4 171 52.6
CiPaw.06G022900 Carya illinoinensis HOM05D004520 ORTHO05D005520 4.2e-31 139.4 181 47.5
Prupe.1G096600 Prunus persica HOM05D004520 ORTHO05D005520 4.2e-31 139.4 148 58.1
C07p21720 Brassica napus HOM05D004520 ORTHO05D005520 7.2e-31 138.7 161 53.4
CANSAT25G0424 Cannabis sativa HOM05D004520 ORTHO05D005520 7.2e-31 138.7 130 56.2
CiPaw.05G232200 Carya illinoinensis HOM05D004520 ORTHO05D005520 9.4e-31 138.3 274 42.0
PGR042G0053 Punica granatum HOM05D004520 ORTHO05D005520 2.1e-30 137.1 123 58.5
TWI56G1051 Tripterygium wilfordii HOM05D004520 ORTHO05D005520 2.7e-30 136.7 180 47.2
AL1G35550 Arabidopsis lyrata HOM05D004520 ORTHO05D005520 3.6e-30 136.3 176 49.4
BolC8t49777H Brassica oleracea HOM05D004520 ORTHO05D005520 1.4e-29 134.4 144 53.5
COL.COLO4_16491 Corchorus olitorius HOM05D004520 ORTHO05D005520 1.4e-29 134.4 266 35.3
Manes.02G156600 Manihot esculenta HOM05D004520 ORTHO05D005520 1.4e-29 134.4 162 46.3
BcaB03g11898 Brassica carinata HOM05D003425 ORTHO05D003897 2.3e-29 133.7 114 61.4
AT1G22110 Arabidopsis thaliana HOM05D004520 ORTHO05D005520 3.0e-29 133.3 166 50.0
BcaC07g39145 Brassica carinata HOM05D003425 ORTHO05D003897 3.0e-29 133.3 130 56.9
Lalb_Chr10g0102151 Lupinus albus HOM05D004520 ORTHO05D005520 4.0e-29 132.9 145 54.5
Carub.0001s2166 Capsella rubella HOM05D004520 ORTHO05D005520 5.2e-29 132.5 150 54.7
Dinv44735 Davidia involucrata HOM05D004520 ORTHO05D005520 6.8e-29 132.1 137 53.3
Cc00_g24440 Coffea canephora HOM05D004520 ORTHO05D005520 1.5e-28 131.0 151 47.7
BcaC06g34928 Brassica carinata HOM05D004520 ORTHO05D005520 2.6e-28 130.2 163 50.9
TWI12G0901 Tripterygium wilfordii HOM05D004520 ORTHO05D005520 2.6e-28 130.2 280 40.7
Gorai.010G044800 Gossypium raimondii HOM05D004520 ORTHO05D005520 9.8e-28 128.3 256 36.7
Lj1g0026094 Lotus japonicus HOM05D004520 ORTHO05D005520 1.7e-27 127.5 213 38.5
Atru.chr13.1276 Acer truncatum HOM05D004520 ORTHO05D005520 2.4e-26 123.6 261 43.3
Gohir.D06G040100 Gossypium hirsutum HOM05D004520 ORTHO05D005520 3.1e-26 123.2 159 47.2
Gohir.A06G039100 Gossypium hirsutum HOM05D004520 ORTHO05D005520 5.4e-26 122.5 165 46.1
Peaxi162Scf00160g01523 Petunia axillaris HOM05D004520 ORTHO05D005520 2.7e-25 120.2 227 37.4
Psat2g075760 Pisum sativum HOM05D004520 ORTHO05D005520 3.5e-25 119.8 112 58.0
Ca_05234_v3 Cicer arietinum L. HOM05D004520 ORTHO05D005520 5.9e-25 119.0 109 56.9
Glyma.14G168100 Glycine max HOM05D004520 ORTHO05D005520 1.0e-24 118.2 157 49.0
TPR.G39080 Trifolium pratense HOM05D004520 ORTHO05D005520 1.3e-24 117.9 124 53.2
Glyma.13G086100 Glycine max HOM05D004520 ORTHO05D005520 2.5e-23 113.6 176 40.3
Medtr5g061650 Medicago truncatula HOM05D004520 ORTHO05D005520 2.5e-23 113.6 112 56.2
Oeu024567.1 Olea europaea HOM05D004520 ORTHO05D005520 3.3e-23 113.2 140 42.9
Migut.N02919 Erythranthe guttata HOM05D004520 ORTHO05D005520 4.2e-23 112.8 114 50.0
Gohir.D05G269800 Gossypium hirsutum HOM05D004520 ORTHO05D005520 5.5e-23 112.5 125 54.4
Phvul.008G170000 Phaseolus vulgaris HOM05D004520 ORTHO05D005520 5.5e-23 112.5 223 35.0
Ciclev10003829m.g Citrus clementina HOM05D004520 ORTHO05D005520 7.2e-23 112.1 167 44.3
Gohir.A05G268200 Gossypium hirsutum HOM05D004520 ORTHO05D005520 9.5e-23 111.7 125 52.0
Gorai.009G282400 Gossypium raimondii HOM05D004520 ORTHO05D005520 2.1e-22 110.5 125 52.8
Gohir.D02G082633 Gossypium hirsutum HOM05D004520 ORTHO05D005520 6.1e-22 109.0 129 51.2
Potri.005G169900 Populus trichocarpa HOM05D004520 ORTHO05D005520 6.1e-22 109.0 171 43.3
Gohir.A02G075405 Gossypium hirsutum HOM05D004520 ORTHO05D005520 1.4e-21 107.8 131 50.4
Manes.18G070900 Manihot esculenta HOM05D004520 ORTHO05D005520 1.4e-21 107.8 151 43.0
arahy.Tifrunner.gnm1.ann1.1581IW Arachis hypogaea HOM05D004520 ORTHO05D005520 2.3e-21 107.1 66 72.7
arahy.Tifrunner.gnm1.ann1.8K5I59 Arachis hypogaea HOM05D004520 ORTHO05D005520 2.3e-21 107.1 60 80.0
Peaxi162Scf00168g00043 Petunia axillaris HOM05D004520 ORTHO05D005520 4.0e-21 106.3 222 35.1
Gorai.005G092700 Gossypium raimondii HOM05D004520 ORTHO05D005520 5.2e-21 105.9 139 48.9
Sabra05G0127300 Salix brachista HOM05D004520 ORTHO05D005520 6.8e-21 105.5 164 41.5
Nitab4.5_0006678g0010 Nicotiana tabacum HOM05D004520 ORTHO05D005520 1.5e-20 104.4 121 51.2
PSO210G7148 Papaver somniferum HOM05D004520 ORTHO05D005520 3.4e-20 103.2 72 66.7
PSO447G0143 Papaver somniferum HOM05D004520 ORTHO05D005520 3.4e-20 103.2 72 66.7
Sed0005622 Sechium edule HOM05D004520 ORTHO05D005520 3.4e-20 103.2 104 52.9
Manes.02G156700 Manihot esculenta HOM05D004520 ORTHO05D005520 4.4e-20 102.8 132 46.2
FAN04G0088 Fragaria x ananassa HOM05D004520 ORTHO05D005520 5.7e-20 102.4 174 39.7
Nitab4.5_0002534g0030 Nicotiana tabacum HOM05D004520 ORTHO05D005520 7.5e-20 102.1 122 47.5
Gorai.009G240500 Gossypium raimondii HOM05D004520 ORTHO05D005520 1.7e-19 100.9 178 44.9
MBI02_g37831_MAGBIO Magnolia biondii HOM05D004520 ORTHO05D005520 1.7e-19 100.9 76 60.5
FAN08G0369 Fragaria x ananassa HOM05D004520 ORTHO05D005520 2.2e-19 100.5 153 43.1
FAN13G0916 Fragaria x ananassa HOM05D004520 ORTHO05D005520 3.7e-19 99.8 174 38.5
Phvul.009G027500 Phaseolus vulgaris HOM05D004520 ORTHO05D005520 4.9e-19 99.4 111 53.2
Gohir.A05G230000 Gossypium hirsutum HOM05D004520 ORTHO05D005520 6.3e-19 99.0 178 44.4
Gohir.D05G232300 Gossypium hirsutum HOM05D004520 ORTHO05D005520 6.3e-19 99.0 178 44.4
CDE10G0363 Ceratophyllum demersum HOM05D004520 ORTHO05D005520 1.4e-18 97.8 148 38.5
ClCG03G008910 Citrullus lanatus HOM05D004520 ORTHO05D005520 1.4e-18 97.8 84 57.1
FvH4_5g38160 Fragaria vesca HOM05D004520 ORTHO05D005520 1.4e-18 97.8 153 43.1
COL.COLO4_16493 Corchorus olitorius HOM05D004520 ORTHO05D005520 1.8e-18 97.4 210 37.1
CARHR071410 Cardamine hirsuta HOM05D004520 ORTHO05D005520 2.4e-18 97.1 134 44.0
CDE10G1290 Ceratophyllum demersum HOM05D004520 ORTHO05D005520 2.4e-18 97.1 62 69.4
Actinidia10294 Actinidia chinensis HOM05D004520 ORTHO05D005520 3.2e-18 96.7 113 49.6
FAN18G1022 Fragaria x ananassa HOM05D004520 ORTHO05D005520 3.2e-18 96.7 181 40.3
PGSC0003DMG400027533 Solanum tuberosum HOM05D004520 ORTHO05D005520 3.2e-18 96.7 193 35.2
CiPaw.05G232100 Carya illinoinensis HOM05D004520 ORTHO05D005520 1.2e-17 94.7 177 37.9
Aqoxy6G00530 Aquilegia oxysepala HOM05D004520 ORTHO05D005520 2.0e-17 94.0 84 57.1
Prupe.1G510300 Prunus persica HOM05D004520 ORTHO05D005520 3.5e-17 93.2 187 36.9
Solyc04g072650.1 Solanum lycopersicum HOM05D004520 ORTHO05D005520 3.5e-17 93.2 190 36.3
Sopen04g028850 Solanum pennellii HOM05D004520 ORTHO05D005520 3.5e-17 93.2 80 57.5
Thecc.08G113500 Theobroma cacao HOM05D004520 ORTHO05D005520 3.5e-17 93.2 111 47.7
A08p28610 Brassica napus HOM05D003425 ORTHO05D003897 1.7e-16 90.9 90 55.6
BraA08t34791Z Brassica rapa HOM05D003425 ORTHO05D003897 1.7e-16 90.9 90 55.6
Actinidia10293 Actinidia chinensis HOM05D001087 ORTHO05D005520 2.3e-16 90.5 144 37.5
CSS0017832 Camellia sinensis var. sinensis HOM05D004520 ORTHO05D005520 5.0e-16 89.4 150 42.0
SalBow6G4633 Salvia bowleyana HOM05D004520 ORTHO05D005520 6.6e-16 89.0 113 43.4
CSS0031359 Camellia sinensis var. sinensis HOM05D004520 ORTHO05D005520 8.6e-16 88.6 149 40.9
Rhsim06G0085800 Rhododendron simsii HOM05D004520 ORTHO05D005520 8.6e-16 88.6 141 42.6
TPR.G34 Trifolium pratense HOM05D004520 ORTHO05D005520 1.1e-15 88.2 114 47.4
AT1G77932 Arabidopsis thaliana HOM05D004520 ORTHO05D005520 1.9e-15 87.4 116 46.6
MD15G1409900 Malus domestica HOM05D004520 ORTHO05D005520 2.5e-15 87.0 200 36.5
SalBow6G1129 Salvia bowleyana HOM05D004520 ORTHO05D005520 2.5e-15 87.0 141 36.9
Atru.chr3.816 Acer truncatum HOM05D004520 ORTHO05D005520 5.6e-15 85.9 186 37.6
AL2G38200 Arabidopsis lyrata HOM05D004520 ORTHO05D005520 5.6e-15 85.9 135 43.7
Migut.C00189 Erythranthe guttata HOM05D004520 ORTHO05D005520 5.6e-15 85.9 118 41.5
Cpa.g.sc66.103 Carica papaya HOM05D004520 ORTHO05D005520 1.2e-14 84.7 176 36.9
C08p21380 Brassica napus HOM05D003425 ORTHO05D003897 1.6e-14 84.3 90 53.3
ATR0564G398 Amborella trichopoda HOM05D004520 ORTHO05D005520 2.1e-14 84.0 58 65.5
SalBow7G1906 Salvia bowleyana HOM05D004520 ORTHO05D005520 2.1e-14 84.0 135 38.5
MELO3C022816.2 Cucumis melo HOM05D004520 ORTHO05D005520 2.8e-14 83.6 110 44.5
Lsat_1_v5_gn_9_44740 Lactuca sativa HOM05D004520 ORTHO05D005520 8.0e-14 82.0 136 38.2
QL12p035728 Quercus lobata HOM05D004520 ORTHO05D005520 8.9e-13 78.6 201 34.3
CsaV3_5G023810 Cucumis sativus L. HOM05D004520 ORTHO05D005520 1.2e-12 78.2 107 43.9
Sp1g19610 Schrenkiella parvula HOM05D004520 ORTHO05D005520 3.4e-12 76.6 88 50.0
SGA_v2.0_scaffold315G48386 Striga asiatica HOM05D004520 ORTHO05D005520 4.4e-12 76.3 110 44.5
CAN.G535.13 Capsicum annuum HOM05D004520 ORTHO05D005520 5.8e-12 75.9 49 67.3
Carub.0002s2483 Capsella rubella HOM05D004520 ORTHO05D005520 7.5e-12 75.5 92 53.3
TAR381G0361 Trochodendron aralioides HOM05D004520 ORTHO05D005520 3.7e-11 73.2 68 55.9
Cfa015930 Carpinus fangiana HOM05D004520 ORTHO05D005520 6.4e-11 72.4 76 50.0
Haze_00560 Corylus avellana HOM05D004520 ORTHO05D005520 8.3e-11 72.0 75 52.0
Haze_00569 Corylus avellana HOM05D004520 ORTHO05D005520 8.3e-11 72.0 75 52.0
Nitab4.5_0001216g0120 Nicotiana tabacum HOM05D004622 ORTHO05D005431 1.9e-10 70.9 171 32.2
SEGI_20648 Sequoiadendron giganteum HOM05D004520 ORTHO05D005520 7.0e-10 68.9 50 62.0
Nitab4.5_0003661g0010 Nicotiana tabacum HOM05D004622 ORTHO05D005431 3.5e-09 66.6 169 32.5
ClCG03G008900 Citrullus lanatus HOM05D004520 ORTHO05D005520 3.0e-08 63.5 148 37.2
Oeu061390.1 Olea europaea HOM05D004520 ORTHO05D005520 3.0e-08 63.5 45 60.0
Glyma.04G106800 Glycine max HOM05D016564 ORTHO05D019006 5.0e-08 62.8 198 32.8
MELO3C022817.2 Cucumis melo HOM05D004520 ORTHO05D005520 6.6e-08 62.4 113 38.1
Dinv44734 Davidia involucrata HOM05D001087 ORTHO05D001846 8.6e-08 62.0 218 32.6
THA.LOC104816921 Tarenaya hassleriana HOM05D004520 ORTHO05D005520 8.6e-08 62.0 71 49.3
Lj4P108T23 Lonicera japonica HOM05D004520 ORTHO05D005520 1.9e-07 60.8 118 36.4
CsaV3_5G023830 Cucumis sativus L. HOM05D004520 ORTHO05D005520 2.5e-07 60.5 115 37.4
Dinv13052 Davidia involucrata HOM05D004520 ORTHO05D005520 2.5e-07 60.5 168 34.5
Atru.chr3.63 Acer truncatum HOM05D004520 ORTHO05D005520 2.1e-06 57.4 114 38.6
ECA248G3754 Erigeron canadensis HOM05D006357 ORTHO05D007925 3.6e-06 56.6 140 31.4
ECA232G0105 Erigeron canadensis HOM05D004520 ORTHO05D005520 6.2e-06 55.8 104 38.5
CiPaw.13G134900 Carya illinoinensis HOM05D004622 ORTHO05D005431 8.0e-06 55.5 148 33.1
VMungo1309G1791 Vigna mungo HOM05D016564 ORTHO05D019006 8.0e-06 55.5 179 31.8


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