Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN04G1713 Fragaria x ananassa HOM05D007051 ORTHO05D008842 2.3e-123 445.7 239 100.0
FAN08G0417 Fragaria x ananassa HOM05D007051 ORTHO05D008842 1.5e-119 433.0 240 97.1
FAN18G1307 Fragaria x ananassa HOM05D007051 ORTHO05D008842 1.5e-119 433.0 240 97.1
FAN13G2377 Fragaria x ananassa HOM05D007051 ORTHO05D008842 2.2e-118 429.1 249 94.8
RcHm_v2.0_Chr7g0202061 Rosa chinensis HOM05D007051 ORTHO05D008842 8.2e-105 384.0 240 87.5
Prupe.5G077000 Prunus persica HOM05D007051 ORTHO05D008842 3.1e-104 382.1 240 84.2
MD04G1081100 Malus domestica HOM05D007051 ORTHO05D008842 1.5e-101 373.2 237 84.0
FvH4_5g00440 Fragaria vesca HOM05D007051 ORTHO05D008842 8.8e-99 364.0 204 97.1
QL12p014185 Quercus lobata HOM05D007051 ORTHO05D008842 5.0e-94 348.2 239 78.2
CANSAT21G0170 Cannabis sativa HOM05D007051 ORTHO05D008842 2.5e-93 345.9 244 77.0
Hma1.2p1_1868F.1_g305950 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 9.4e-93 344.0 242 76.9
CSS0029957 Camellia sinensis var. sinensis HOM05D007051 ORTHO05D008842 2.7e-92 342.4 241 77.6
CSS0034738 Camellia sinensis var. sinensis HOM05D007051 ORTHO05D008842 1.0e-91 340.5 241 77.2
PGR031G0283 Punica granatum HOM05D007051 ORTHO05D008842 5.2e-91 338.2 242 76.4
CiPaw.12G105800 Carya illinoinensis HOM05D007051 ORTHO05D008842 7.5e-90 334.3 241 75.9
Eucgr.D02017 Eucalyptus grandis HOM05D007051 ORTHO05D008842 1.4e-88 330.1 243 74.1
Lj2g0024450 Lotus japonicus HOM05D007051 ORTHO05D008842 1.4e-88 330.1 244 73.8
Atru.chr9.1399 Acer truncatum HOM05D007051 ORTHO05D008842 1.2e-87 327.0 243 73.7
Ciclev10021945m.g Citrus clementina HOM05D007051 ORTHO05D008842 1.2e-87 327.0 242 74.0
Ca_06694_v3 Cicer arietinum L. HOM05D007051 ORTHO05D008842 2.3e-86 322.8 242 71.9
Actinidia27438 Actinidia chinensis HOM05D007051 ORTHO05D008842 2.9e-86 322.4 235 74.5
Dinv21586 Davidia involucrata HOM05D007051 ORTHO05D008842 3.8e-86 322.0 242 73.1
Duzib205G0440 Durio zibethinus HOM05D007051 ORTHO05D008842 1.1e-85 320.5 241 72.2
Manes.01G074700 Manihot esculenta HOM05D007051 ORTHO05D008842 1.5e-85 320.1 241 71.0
GSVIVG01006029001 Vitis vinifera HOM05D007051 ORTHO05D008842 1.9e-85 319.7 244 73.0
TWI60G1677 Tripterygium wilfordii HOM05D007051 ORTHO05D008842 3.3e-85 318.9 240 71.2
Gohir.A11G020000 Gossypium hirsutum HOM05D007051 ORTHO05D008842 5.5e-85 318.2 243 72.8
TAR629G3399 Trochodendron aralioides HOM05D007051 ORTHO05D008842 5.5e-85 318.2 241 73.9
Potri.001G119100 Populus trichocarpa HOM05D007051 ORTHO05D008842 2.1e-84 316.2 237 72.6
Sabra01G0092000 Salix brachista HOM05D007051 ORTHO05D008842 3.6e-84 315.5 241 71.8
Gohir.D11G019700 Gossypium hirsutum HOM05D007051 ORTHO05D008842 4.7e-84 315.1 241 72.6
MELO3C005568.2 Cucumis melo HOM05D007051 ORTHO05D008842 6.1e-84 314.7 240 69.6
Gorai.007G021000 Gossypium raimondii HOM05D007051 ORTHO05D008842 6.1e-84 314.7 243 72.4
THA.LOC104809449 Tarenaya hassleriana HOM05D007051 ORTHO05D008842 4.0e-83 312.0 240 71.2
ATR0665G189 Amborella trichopoda HOM05D007051 ORTHO05D008842 5.2e-83 311.6 241 68.9
Glyma.11G030400 Glycine max HOM05D007051 ORTHO05D008842 5.2e-83 311.6 243 70.0
Sc01g0009270 Simmondsia chinensis HOM05D007051 ORTHO05D008842 5.2e-83 311.6 241 71.0
ClCG01G003730 Citrullus lanatus HOM05D007051 ORTHO05D008842 1.5e-82 310.1 245 69.0
Lsat_1_v5_gn_3_2541 Lactuca sativa HOM05D007051 ORTHO05D008842 1.5e-82 310.1 242 67.8
CsaV3_5G003870 Cucumis sativus L. HOM05D007051 ORTHO05D008842 5.7e-82 308.1 240 68.8
Cc08_g13070 Coffea canephora HOM05D007051 ORTHO05D008842 7.5e-82 307.8 220 73.6
Migut.A00866 Erythranthe guttata HOM05D007051 ORTHO05D008842 7.5e-82 307.8 225 69.3
SGA_v2.0_scaffold120G32840 Striga asiatica HOM05D007051 ORTHO05D008842 7.5e-82 307.8 237 68.4
Haze_08593 Corylus avellana HOM05D007051 ORTHO05D008842 4.9e-81 305.1 219 74.4
CDE02G0603 Ceratophyllum demersum HOM05D007051 ORTHO05D008842 6.3e-81 304.7 240 69.2
vmacro14055 Vaccinium macrocarpon HOM05D007051 ORTHO05D008842 6.3e-81 304.7 229 71.2
SalBow6G1069 Salvia bowleyana HOM05D007051 ORTHO05D008842 8.3e-81 304.3 225 69.8
unitig_699.g19761 Utricularia gibba HOM05D001703 ORTHO05D007194 1.8e-80 303.1 231 69.3
DCAR_006807 Daucus carota HOM05D007051 ORTHO05D008842 4.1e-80 302.0 241 65.6
arahy.Tifrunner.gnm1.ann1.2BY1CI Arachis hypogaea HOM05D007051 ORTHO05D008842 2.7e-79 299.3 246 66.3
Medtr5g011990 Medicago truncatula HOM05D007051 ORTHO05D008842 1.3e-78 297.0 252 66.7
arahy.Tifrunner.gnm1.ann1.BK8PZK Arachis hypogaea HOM05D007051 ORTHO05D008842 2.3e-78 296.2 246 65.9
Nitab4.5_0004482g0060 Nicotiana tabacum HOM05D007051 ORTHO05D008842 2.9e-78 295.8 207 73.9
Psat2g179120 Pisum sativum HOM05D007051 ORTHO05D008842 6.6e-78 294.7 244 66.0
CAN.G1337.17 Capsicum annuum HOM05D007051 ORTHO05D008842 8.6e-78 294.3 246 65.9
Solyc08g079240.4 Solanum lycopersicum HOM05D007051 ORTHO05D008842 8.6e-78 294.3 247 65.6
Sopen08g027680 Solanum pennellii HOM05D007051 ORTHO05D008842 1.9e-77 293.1 247 65.2
Nn6g34078 Nelumbo nucifera HOM05D007051 ORTHO05D008842 4.3e-77 292.0 206 73.8
PSO717G0094 Papaver somniferum HOM05D007051 ORTHO05D008842 4.3e-77 292.0 242 65.7
AL2G13010 Arabidopsis lyrata HOM05D007051 ORTHO05D008842 5.6e-77 291.6 241 66.4
PSO675G3044 Papaver somniferum HOM05D007051 ORTHO05D008842 5.6e-77 291.6 242 65.7
Nitab4.5_0010733g0020 Nicotiana tabacum HOM05D007051 ORTHO05D008842 7.3e-77 291.2 207 72.9
PGSC0003DMG400004734 Solanum tuberosum HOM05D007051 ORTHO05D008842 7.3e-77 291.2 207 73.4
MSTRG.12072 Avicennia marina HOM05D007051 ORTHO05D008842 6.1e-76 288.1 238 64.7
Aa31LG2G320 Aethionema arabicum HOM05D007051 ORTHO05D008842 8.0e-76 287.7 241 65.6
Aqoxy7G00687 Aquilegia oxysepala HOM05D007051 ORTHO05D008842 8.0e-76 287.7 239 67.4
Sp2g01860 Schrenkiella parvula HOM05D007051 ORTHO05D008842 1.0e-75 287.3 240 65.8
Peaxi162Scf00002g00416 Petunia axillaris HOM05D007051 ORTHO05D008842 1.4e-75 287.0 207 71.5
Hund11573 Selenicereus undatus HOM05D007051 ORTHO05D008842 1.4e-75 287.0 242 66.1
AT1G62780 Arabidopsis thaliana HOM05D007051 ORTHO05D008842 1.8e-75 286.6 241 65.6
Thhalv10023664m.g Eutrema salsugineum HOM05D007051 ORTHO05D008842 1.8e-75 286.6 241 66.0
VMungo1215G1548 Vigna mungo HOM05D007051 ORTHO05D008842 1.8e-75 286.6 243 64.6
C09p19230 Brassica napus HOM05D007051 ORTHO05D008842 2.3e-75 286.2 241 66.0
BcaB07g31359 Brassica carinata HOM05D007051 ORTHO05D008842 5.2e-75 285.0 241 66.0
BcaC04g22447 Brassica carinata HOM05D007051 ORTHO05D008842 5.2e-75 285.0 241 65.6
A09p15970 Brassica napus HOM05D007051 ORTHO05D008842 5.2e-75 285.0 241 66.0
BraA09t37232Z Brassica rapa HOM05D007051 ORTHO05D008842 5.2e-75 285.0 241 66.0
CARHR049060 Cardamine hirsuta HOM05D007051 ORTHO05D008842 6.8e-75 284.6 241 65.1
Lalb_Chr09g0324461 Lupinus albus HOM05D007051 ORTHO05D008842 1.2e-74 283.9 247 63.2
Oeu024055.1 Olea europaea HOM05D007051 ORTHO05D008842 2.0e-74 283.1 227 67.8
Os04g0105700 Oryza sativa ssp. japonica HOM05D007051 ORTHO05D008842 2.0e-74 283.1 222 66.7
BolC9t54830H Brassica oleracea HOM05D007051 ORTHO05D008842 3.4e-74 282.3 241 65.6
AUR62007459 Chenopodium quinoa HOM05D007051 ORTHO05D008842 4.4e-74 282.0 241 66.8
Phvul.002G060700 Phaseolus vulgaris HOM05D007051 ORTHO05D008842 5.8e-74 281.6 243 64.2
AUR62039918 Chenopodium quinoa HOM05D007051 ORTHO05D008842 1.7e-73 280.0 241 66.8
MBI04_g42034_MAGBIO Magnolia biondii HOM05D007051 ORTHO05D008842 2.9e-73 279.3 236 66.1
Sed0010491 Sechium edule HOM05D007051 ORTHO05D008842 1.8e-72 276.6 220 66.4
Zm00001eb300480 Zea mays HOM05D007051 ORTHO05D008842 7.0e-72 274.6 221 66.1
MBI04_g32270_MAGBIO Magnolia biondii HOM05D007051 ORTHO05D008842 2.0e-71 273.1 233 66.1
HanXRQChr17g0549011 Helianthus annuus HOM05D007051 ORTHO05D008842 1.7e-70 270.0 242 59.5
Carub.0002s0220 Capsella rubella HOM05D007051 ORTHO05D008842 3.0e-70 269.2 250 60.4
ECA246G0398 Erigeron canadensis HOM05D007051 ORTHO05D008842 1.1e-64 250.8 231 58.0
Hma1.2p1_1868F.1_g305940 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 2.4e-64 249.6 172 76.2
Thecc.03G259200 Theobroma cacao HOM05D007051 ORTHO05D008842 1.6e-63 246.9 190 70.0
HPP92_015062 Vanilla planifolia HOM05D007051 ORTHO05D008842 3.0e-62 242.7 220 58.6
AagrBONN_evm.TU.Sc2ySwM_362.1892 Anthoceros agrestis HOM05D007051 ORTHO05D008842 4.0e-59 232.3 209 60.3
SEGI_34604 Sequoiadendron giganteum HOM05D007051 ORTHO05D008842 2.0e-58 229.9 216 57.9
TPR.G820 Trifolium pratense HOM05D007051 ORTHO05D008842 3.4e-58 229.2 246 57.3
Pp3c10_11840 Physcomitrium patens HOM05D007051 ORTHO05D008842 4.1e-56 222.2 213 55.4
SMO367G0716 Selaginella moellendorffii HOM05D007051 ORTHO05D008842 1.3e-49 200.7 227 49.3
Glyma.01G211400 Glycine max HOM05D007051 ORTHO05D008842 2.4e-40 169.9 157 63.1
Mapoly0062s0102 Marchantia polymorpha HOM05D007051 ORTHO05D008842 3.2e-40 169.5 227 47.1
Duzib084G0812 Durio zibethinus HOM05D007051 ORTHO05D008842 5.6e-37 158.7 183 55.2
Cpa.g.sc29.111 Carica papaya HOM05D007051 ORTHO05D008842 1.1e-35 154.5 119 68.1
Hma1.2p1_2244F.1_g317930 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 1.3e-33 147.5 99 81.8
Cre13.g579550 Chlamydomonas reinhardtii HOM05D007051 ORTHO05D008842 7.4e-29 131.7 247 39.7
EL10Ac5g12994 Beta vulgaris HOM05D007051 ORTHO05D008842 1.3e-28 131.0 117 65.0
vmacro16051 Vaccinium macrocarpon HOM05D007051 ORTHO05D008842 4.6e-23 112.5 79 78.5
PRCOL_00000809 Prasinoderma coloniale HOM05D007051 ORTHO05D008842 1.5e-18 97.4 205 33.2
MCO02G329 Micromonas commoda HOM05D007051 ORTHO05D008842 4.8e-12 75.9 151 32.5
Oeu056087.1 Olea europaea HOM05D007051 ORTHO05D008842 9.0e-11 71.6 52 69.2
arahy.Tifrunner.gnm1.ann1.VE7KXP Arachis hypogaea HOM05D007051 ORTHO05D008842 1.7e-09 67.4 56 64.3
Glyma.05G077300 Glycine max HOM05D007051 ORTHO05D008842 2.1e-07 60.5 46 69.6


User provided reference genes

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