Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN04G1474 Fragaria x ananassa HOM05D008757 ORTHO05D010583 4.7e-152 541.2 277 100.0
FAN13G0940 Fragaria x ananassa HOM05D008757 ORTHO05D010583 1.6e-144 516.2 279 95.7
FAN08G1681 Fragaria x ananassa HOM05D008757 ORTHO05D010583 1.9e-137 492.7 279 92.8
FAN18G1448 Fragaria x ananassa HOM05D008757 ORTHO05D010583 3.2e-137 491.9 279 92.8
FvH4_5g39560 Fragaria vesca HOM05D008757 ORTHO05D010583 7.0e-132 474.2 279 90.7
RcHm_v2.0_Chr7g0241871 Rosa chinensis HOM05D008757 ORTHO05D010583 1.8e-111 406.4 279 77.1
MD11G1316900 Malus domestica HOM05D008757 ORTHO05D010583 5.5e-60 235.3 281 53.0
Prupe.8G269900 Prunus persica HOM05D008757 ORTHO05D010583 5.3e-55 218.8 207 58.5
Dinv10074 Davidia involucrata HOM05D008757 ORTHO05D010583 3.1e-39 166.4 221 45.2
CSS0009821 Camellia sinensis var. sinensis HOM05D008757 ORTHO05D010583 2.1e-35 153.7 272 37.9
CSS0028194 Camellia sinensis var. sinensis HOM05D008757 ORTHO05D010583 3.6e-35 152.9 272 37.9
QL12p028983 Quercus lobata HOM05D008757 ORTHO05D010583 4.7e-35 152.5 350 34.0
Cfa005830 Carpinus fangiana HOM05D008757 ORTHO05D010583 2.3e-34 150.2 353 35.1
Hma1.2p1_1302F.1_g274300 Hydrangea macrophylla HOM05D008757 ORTHO05D010583 5.2e-34 149.1 163 46.6
Gohir.A11G110800 Gossypium hirsutum HOM05D008757 ORTHO05D010583 5.7e-33 145.6 328 33.2
vmacro15123 Vaccinium macrocarpon HOM05D008757 ORTHO05D010583 3.7e-32 142.9 172 46.5
Rhsim01G0289500 Rhododendron simsii HOM05D008757 ORTHO05D010583 3.1e-31 139.8 320 34.1
Gohir.D11G115900 Gossypium hirsutum HOM05D008757 ORTHO05D010583 4.1e-31 139.4 328 32.3
COL.COLO4_23259 Corchorus olitorius HOM05D002981 ORTHO05D003725 5.0e-29 132.5 171 40.4
TAR365G0134 Trochodendron aralioides HOM05D008757 ORTHO05D010583 6.5e-29 132.1 175 40.0
Sabra02G0159400 Salix brachista HOM05D008757 ORTHO05D010583 5.5e-28 129.0 243 35.4
THA.LOC104817467 Tarenaya hassleriana HOM05D012658 ORTHO05D010583 2.1e-27 127.1 236 37.7
Actinidia25837 Actinidia chinensis HOM05D008757 ORTHO05D010583 2.7e-27 126.7 303 33.3
Haze_05014 Corylus avellana HOM05D008757 ORTHO05D010583 1.4e-26 124.4 334 32.3
TWI18G1222 Tripterygium wilfordii HOM05D008757 ORTHO05D010583 4.0e-26 122.9 183 38.3
Potri.002G198200 Populus trichocarpa HOM05D008757 ORTHO05D010583 6.8e-26 122.1 234 35.5
MSTRG.18114 Avicennia marina HOM05D008757 ORTHO05D010583 2.2e-24 117.1 187 35.3
DCAR_012364 Daucus carota HOM05D008757 ORTHO05D010583 7.0e-23 112.1 180 37.2
ATR0706G029 Amborella trichopoda HOM05D008757 ORTHO05D010583 1.6e-22 110.9 172 37.2
GSVIVG01028089001 Vitis vinifera HOM05D008757 ORTHO05D010583 8.5e-21 105.1 159 40.3
SGA_v2.0_scaffold334G49056 Striga asiatica HOM05D008757 ORTHO05D010583 1.1e-20 104.8 144 37.5
BcaC07g40779 Brassica carinata HOM05D012658 ORTHO05D010583 9.5e-20 101.7 178 34.3
Gorai.007G124100 Gossypium raimondii HOM05D008757 ORTHO05D010583 9.5e-20 101.7 293 30.0
CARHR172890 Cardamine hirsuta HOM05D012658 ORTHO05D010583 1.2e-19 101.3 218 33.9
Migut.D00097 Erythranthe guttata HOM05D008757 ORTHO05D010583 1.6e-19 100.9 231 31.6
BraA09t40861Z Brassica rapa HOM05D012658 ORTHO05D010583 2.8e-19 100.1 175 36.0
A09p54480 Brassica napus HOM05D012658 ORTHO05D010583 1.8e-18 97.4 175 36.0
Lj1A19T23 Lonicera japonica HOM05D008757 ORTHO05D010583 2.3e-18 97.1 165 35.2
AT3G62620 Arabidopsis thaliana HOM05D012658 ORTHO05D010583 4.0e-18 96.3 128 39.1
AL5G45370 Arabidopsis lyrata HOM05D012658 ORTHO05D010583 1.2e-17 94.7 256 28.5
Nitab4.5_0000116g0030 Nicotiana tabacum HOM05D008757 ORTHO05D010583 1.2e-17 94.7 142 39.4
Carub.0005s2928 Capsella rubella HOM05D012658 ORTHO05D010583 1.5e-17 94.4 221 33.0
BolC8t51315H Brassica oleracea HOM05D012658 ORTHO05D010583 3.4e-17 93.2 128 39.1
BcaC07g40736 Brassica carinata HOM05D012658 ORTHO05D010583 4.4e-17 92.8 227 32.2
Thhalv10006051m.g Eutrema salsugineum HOM05D012658 ORTHO05D010583 5.7e-17 92.4 227 28.6
C08p37370 Brassica napus HOM05D012658 ORTHO05D010583 6.3e-16 89.0 128 38.3
Thecc.01G310700 Theobroma cacao HOM05D008757 ORTHO05D010583 6.3e-16 89.0 99 49.5
A05p34600 Brassica napus HOM05D012658 ORTHO05D010583 9.2e-15 85.1 130 38.5
Nitab4.5_0000906g0100 Nicotiana tabacum HOM05D008757 ORTHO05D010583 3.5e-14 83.2 142 37.3
Sopen01g031410 Solanum pennellii HOM05D008757 ORTHO05D010583 4.5e-14 82.8 168 31.5
Solyc01g079630.3 Solanum lycopersicum HOM05D008757 ORTHO05D010583 7.7e-14 82.0 154 33.1
SEGI_31757 Sequoiadendron giganteum HOM05D008757 ORTHO05D010583 2.3e-13 80.5 129 30.2
Peaxi162Scf00001g00251 Petunia axillaris HOM05D008757 ORTHO05D010583 7.3e-12 75.5 296 28.0
PGR119G0138 Punica granatum HOM05D008757 ORTHO05D010583 1.8e-10 70.9 257 30.0
Aqoxy3G01114 Aquilegia oxysepala HOM05D008757 ORTHO05D010583 1.2e-09 68.2 175 26.3
Cc08_g11800 Coffea canephora HOM05D008757 ORTHO05D010583 7.5e-09 65.5 247 25.5


User provided reference genes

Program Settings