Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN04G1438 Fragaria x ananassa HOM05D008167 ORTHO05D010296 3.1e-226 788.1 390 100.0
FvH4_5g37850 Fragaria vesca HOM05D008167 ORTHO05D010296 6.4e-216 753.8 388 96.6
FAN08G3120 Fragaria x ananassa HOM05D008167 ORTHO05D010296 6.4e-216 753.8 388 96.4
FAN13G0369 Fragaria x ananassa HOM05D008167 ORTHO05D010296 5.7e-212 740.7 389 95.6
FAN18G0166 Fragaria x ananassa HOM05D008167 ORTHO05D010296 2.8e-187 658.7 337 97.0
RcHm_v2.0_Chr7g0239831 Rosa chinensis HOM05D008167 ORTHO05D010296 7.0e-178 627.5 394 82.2
Prupe.1G513100 Prunus persica HOM05D008167 ORTHO05D010296 4.7e-150 535.0 388 69.8
Thecc.08G110600 Theobroma cacao HOM05D008167 ORTHO05D010296 1.2e-124 450.7 397 57.2
MD15G1365100 Malus domestica HOM05D008167 ORTHO05D010296 2.6e-124 449.5 296 75.3
QL12p036142 Quercus lobata HOM05D008167 ORTHO05D010296 2.9e-123 446.0 401 57.6
Actinidia10306 Actinidia chinensis HOM05D008167 ORTHO05D010296 1.9e-122 443.4 397 57.9
Dinv13035 Davidia involucrata HOM05D008167 ORTHO05D010296 7.1e-122 441.4 371 60.4
Cfa015915 Carpinus fangiana HOM05D008167 ORTHO05D010296 9.3e-122 441.0 402 57.7
COL.COLO4_16444 Corchorus olitorius HOM05D008167 ORTHO05D010296 1.1e-119 434.1 384 57.8
Gorai.002G219300 Gossypium raimondii HOM05D008167 ORTHO05D010296 1.5e-119 433.7 397 56.9
CiPaw.05G235800 Carya illinoinensis HOM05D008167 ORTHO05D010296 1.9e-119 433.3 403 55.8
Ciclev10001481m.g Citrus clementina HOM05D008167 ORTHO05D010296 7.3e-119 431.4 380 58.7
Manes.02G154800 Manihot esculenta HOM05D008167 ORTHO05D010296 7.3e-119 431.4 393 57.5
TWI56G0729 Tripterygium wilfordii HOM05D008167 ORTHO05D010296 7.3e-119 431.4 397 55.4
TAR628G0982 Trochodendron aralioides HOM05D008167 ORTHO05D010296 1.5e-116 423.7 391 55.2
Lj4C716T9 Lonicera japonica HOM05D008167 ORTHO05D010296 1.3e-115 420.6 390 56.4
Lj4C719T5 Lonicera japonica HOM05D008167 ORTHO05D010296 3.8e-115 419.1 391 56.5
arahy.Tifrunner.gnm1.ann1.R32LA5 Arachis hypogaea HOM05D008167 ORTHO05D010296 6.0e-113 411.8 374 53.7
Gohir.D01G176900 Gossypium hirsutum HOM05D008167 ORTHO05D010296 4.3e-111 405.6 363 58.1
Potri.002G093800 Populus trichocarpa HOM05D008167 ORTHO05D010296 9.6e-111 404.4 396 54.5
Nn1g05299 Nelumbo nucifera HOM05D008167 ORTHO05D010296 1.4e-109 400.6 392 53.1
Aqoxy6G00583 Aquilegia oxysepala HOM05D008167 ORTHO05D010296 1.5e-108 397.1 402 52.5
Lalb_Chr01g0013571 Lupinus albus HOM05D008167 ORTHO05D010296 1.3e-107 394.0 378 52.4
PSO541G2703 Papaver somniferum HOM05D008167 ORTHO05D010296 2.2e-107 393.3 386 52.6
Gohir.A01G186400 Gossypium hirsutum HOM05D008167 ORTHO05D010296 1.4e-106 390.6 372 55.4
PSO133G0102 Papaver somniferum HOM05D008167 ORTHO05D010296 1.4e-106 390.6 387 52.7
arahy.Tifrunner.gnm1.ann1.DD9M5F Arachis hypogaea HOM05D008167 ORTHO05D010296 1.9e-106 390.2 437 46.7
Duzib093G0044 Durio zibethinus HOM05D008167 ORTHO05D010296 1.9e-106 390.2 367 54.8
CANSAT25G1054 Cannabis sativa HOM05D008167 ORTHO05D010296 7.1e-106 388.3 347 57.9
MBI02_g36661_MAGBIO Magnolia biondii HOM05D008167 ORTHO05D010296 1.8e-104 383.6 387 51.7
Cpa.g.sc66.82 Carica papaya HOM05D008167 ORTHO05D010296 2.1e-102 376.7 358 52.5
Lj3g0012000 Lotus japonicus HOM05D008167 ORTHO05D010296 4.0e-101 372.5 348 54.6
Medtr8g020400 Medicago truncatula HOM05D008167 ORTHO05D010296 7.6e-100 368.2 369 52.3
Lsat_1_v5_gn_0_9700 Lactuca sativa HOM05D008167 ORTHO05D010296 2.9e-99 366.3 374 52.4
Atru.chr13.1254 Acer truncatum HOM05D008167 ORTHO05D010296 6.5e-99 365.2 289 61.6
VMungo0331G0414 Vigna mungo HOM05D008167 ORTHO05D010296 9.3e-98 361.3 380 52.6
HanXRQChr04g0111501 Helianthus annuus HOM05D008167 ORTHO05D010296 1.2e-97 360.9 376 50.8
EL10Ac1g01257 Beta vulgaris HOM05D008167 ORTHO05D010296 1.5e-95 354.0 350 50.3
AUR62027724 Chenopodium quinoa HOM05D008167 ORTHO05D010296 1.5e-92 344.0 339 51.6
GSVIVG01009002001 Vitis vinifera HOM05D008167 ORTHO05D010296 2.2e-91 340.1 277 61.4
Os06g0222800 Oryza sativa ssp. japonica HOM05D008167 ORTHO05D010296 9.3e-90 334.7 374 48.7
DCAR_008714 Daucus carota HOM05D008167 ORTHO05D010296 2.2e-86 323.6 312 53.2
Sabra02G0073900 Salix brachista HOM05D008167 ORTHO05D010296 5.9e-84 315.5 377 47.2
ECA232G3852 Erigeron canadensis HOM05D008167 ORTHO05D010296 1.3e-78 297.7 258 57.0
TPR.G32489 Trifolium pratense HOM05D008167 ORTHO05D010296 4.8e-78 295.8 301 49.5
Psat4g183040 Pisum sativum HOM05D008167 ORTHO05D010296 5.3e-77 292.4 264 56.4
Ca_23370_v3 Cicer arietinum L. HOM05D008167 ORTHO05D010296 9.1e-77 291.6 263 54.8
vmacro21234 Vaccinium macrocarpon HOM05D008167 ORTHO05D010296 1.4e-72 277.7 297 52.9
Eucgr.F02444 Eucalyptus grandis HOM05D008167 ORTHO05D010296 4.1e-69 266.2 309 49.5
ATR0564G341 Amborella trichopoda HOM05D008167 ORTHO05D010296 8.5e-59 231.9 248 44.8
Glyma.16G006900 Glycine max HOM05D008167 ORTHO05D010296 1.0e-48 198.4 266 45.5
Pp3c20_15640 Physcomitrium patens HOM05D008167 ORTHO05D010296 6.1e-41 172.6 365 33.7
Haze_17026 Corylus avellana HOM05D000028 ORTHO05D010296 5.7e-39 166.0 169 52.7
SEGI_30626 Sequoiadendron giganteum HOM05D008167 ORTHO05D010296 3.7e-38 163.3 254 39.0
Haze_00155 Corylus avellana HOM05D008167 ORTHO05D010296 8.3e-38 162.2 112 70.5
Haze_24435 Corylus avellana HOM05D006271 ORTHO05D008237 4.1e-37 159.8 111 70.3
vmacro21235 Vaccinium macrocarpon HOM05D008167 ORTHO05D010296 4.3e-34 149.8 119 57.1
Haze_15967 Corylus avellana HOM05D008167 ORTHO05D010296 5.4e-29 132.9 127 54.3
Haze_08650 Corylus avellana HOM05D008167 ORTHO05D010296 2.2e-22 110.9 82 62.2
MD15G1365000 Malus domestica HOM05D008167 ORTHO05D010296 1.8e-16 91.3 85 60.0
Glyma.07G037500 Glycine max HOM05D008167 ORTHO05D010296 1.2e-15 88.6 120 45.8
Medtr8g020410 Medicago truncatula HOM05D008167 ORTHO05D010296 1.9e-10 71.2 54 57.4
PSO017G0187 Papaver somniferum HOM05D006671 ORTHO05D008637 2.9e-06 57.4 326 22.4
Ciclev10025368m.g Citrus clementina HOM05D006671 ORTHO05D008637 6.4e-06 56.2 330 23.0


User provided reference genes

Program Settings