Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN04G1376 Fragaria x ananassa HOM05D000548 ORTHO05D001552 8.9e-24 112.8 60 100.0
FAN18G1231 Fragaria x ananassa HOM05D000548 ORTHO05D001552 1.7e-14 82.0 60 70.0
FvH4_5g15780 Fragaria vesca HOM05D000548 ORTHO05D001552 8.1e-09 63.2 28 92.9
FAN13G2579 Fragaria x ananassa HOM05D000548 ORTHO05D001552 8.1e-09 63.2 28 92.9
FAN18G2231 Fragaria x ananassa HOM05D000548 ORTHO05D001552 8.1e-09 63.2 28 92.9
RcHm_v2.0_Chr7g0180341 Rosa chinensis HOM05D000548 ORTHO05D001552 8.1e-09 63.2 28 92.9
Prupe.5G184400 Prunus persica HOM05D000548 ORTHO05D001552 1.4e-08 62.4 28 89.3
Duzib084G0125 Durio zibethinus HOM05D000548 ORTHO05D001552 4.0e-08 60.8 28 85.7
Sc04g0002310 Simmondsia chinensis HOM05D000548 ORTHO05D001552 4.0e-08 60.8 28 89.3
Thecc.03G076900 Theobroma cacao HOM05D000548 ORTHO05D001552 4.0e-08 60.8 28 85.7
Ah.11g048840 Amaranthus hybridus HOM05D000548 ORTHO05D001552 1.5e-07 58.9 28 85.7
TWI60G0748 Tripterygium wilfordii HOM05D000548 ORTHO05D001552 1.5e-07 58.9 28 85.7
MELO3C017147.2 Cucumis melo HOM05D000548 ORTHO05D001552 2.0e-07 58.5 28 82.1
CsaV3_1G002060 Cucumis sativus L. HOM05D000548 ORTHO05D001552 2.0e-07 58.5 28 82.1
DCAR_023640 Daucus carota HOM05D000548 ORTHO05D001552 2.0e-07 58.5 27 77.8
Cpa.g.sc17.184 Carica papaya HOM05D000548 ORTHO05D001552 2.6e-07 58.2 42 64.3
MD14G1191800 Malus domestica HOM05D000548 ORTHO05D001552 2.6e-07 58.2 42 64.3
Nn4g23002 Nelumbo nucifera HOM05D000548 ORTHO05D001552 2.6e-07 58.2 28 82.1
RcHm_v2.0_Chr4g0434791 Rosa chinensis HOM05D000548 ORTHO05D001552 2.6e-07 58.2 27 77.8
Aqoxy3G00821 Aquilegia oxysepala HOM05D000548 ORTHO05D001552 3.4e-07 57.8 28 82.1
SEGI_00854 Sequoiadendron giganteum HOM05D000548 ORTHO05D001552 3.4e-07 57.8 28 78.6
Solyc03g113350.3 Solanum lycopersicum HOM05D000548 ORTHO05D001552 3.4e-07 57.8 28 82.1
Sopen03g032400 Solanum pennellii HOM05D000548 ORTHO05D001552 3.4e-07 57.8 28 82.1
MSTRG.13547 Avicennia marina HOM05D000548 ORTHO05D001552 4.4e-07 57.4 27 77.8
Manes.06G065800 Manihot esculenta HOM05D000548 ORTHO05D001552 4.4e-07 57.4 27 77.8
Medtr4g107440 Medicago truncatula HOM05D000548 ORTHO05D001552 4.4e-07 57.4 28 78.6
Prupe.1G314300 Prunus persica HOM05D000548 ORTHO05D001552 4.4e-07 57.4 27 77.8
Nitab4.5_0001616g0110 Nicotiana tabacum HOM05D000548 ORTHO05D001552 5.8e-07 57.0 27 77.8
Sed0009035 Sechium edule HOM05D000548 ORTHO05D001552 5.8e-07 57.0 28 78.6
Atru.chr9.2339 Acer truncatum HOM05D000548 ORTHO05D001552 7.6e-07 56.6 28 78.6
ATR1125G088 Amborella trichopoda HOM05D000548 ORTHO05D001552 7.6e-07 56.6 28 78.6
HanXRQChr11g0341021 Helianthus annuus HOM05D000548 ORTHO05D001552 7.6e-07 56.6 27 74.1
Hund02680 Selenicereus undatus HOM05D000548 ORTHO05D001552 7.6e-07 56.6 28 82.1
PGSC0003DMG400013184 Solanum tuberosum HOM05D000548 ORTHO05D001552 7.6e-07 56.6 28 78.6
CiPaw.06G018000 Carya illinoinensis HOM05D000548 ORTHO05D001552 9.9e-07 56.2 27 74.1
Cc11_g09850 Coffea canephora HOM05D000548 ORTHO05D001552 9.9e-07 56.2 27 74.1
Glyma.17G096900 Glycine max HOM05D000548 ORTHO05D001552 9.9e-07 56.2 28 78.6
HanXRQChr09g0271311 Helianthus annuus HOM05D000548 ORTHO05D001552 9.9e-07 56.2 28 78.6
Lalb_Chr13g0298121 Lupinus albus HOM05D000548 ORTHO05D001552 9.9e-07 56.2 28 78.6
PGR083G0643 Punica granatum HOM05D000548 ORTHO05D001552 9.9e-07 56.2 28 78.6
CAN.G610.58 Capsicum annuum HOM05D000548 ORTHO05D001552 1.3e-06 55.8 27 74.1
Migut.I00112 Erythranthe guttata HOM05D000548 ORTHO05D001552 1.3e-06 55.8 28 78.6
Eucgr.G02303 Eucalyptus grandis HOM05D000548 ORTHO05D001552 1.3e-06 55.8 27 74.1
Mapoly0021s0025 Marchantia polymorpha HOM05D000548 ORTHO05D001552 1.3e-06 55.8 24 83.3
PGSC0003DMG402014575 Solanum tuberosum HOM05D000548 ORTHO05D001552 1.3e-06 55.8 27 74.1
VMungo1215G0054 Vigna mungo HOM05D000548 ORTHO05D001552 1.3e-06 55.8 46 54.3
Cfa019016 Carpinus fangiana HOM05D000548 ORTHO05D001552 1.7e-06 55.5 28 78.6
ClCG06G016470 Citrullus lanatus HOM05D000548 ORTHO05D001552 1.7e-06 55.5 27 77.8
Haze_07396 Corylus avellana HOM05D000548 ORTHO05D001552 1.7e-06 55.5 28 78.6
Lj4g0020101 Lotus japonicus HOM05D000548 ORTHO05D001552 1.7e-06 55.5 43 58.1
Oeu039548.1 Olea europaea HOM05D000548 ORTHO05D001552 1.7e-06 55.5 28 78.6
Potri.008G123300 Populus trichocarpa HOM05D000548 ORTHO05D001552 1.7e-06 55.5 27 74.1
Potri.010G122200 Populus trichocarpa HOM05D000548 ORTHO05D001552 1.7e-06 55.5 27 74.1
Sabra08G0093600 Salix brachista HOM05D000548 ORTHO05D001552 1.7e-06 55.5 27 74.1
Sabra10G0092300 Salix brachista HOM05D000548 ORTHO05D001552 1.7e-06 55.5 27 74.1
SMO367G0153 Selaginella moellendorffii HOM05D000548 ORTHO05D001552 1.7e-06 55.5 24 83.3
Solyc05g009150.4 Solanum lycopersicum HOM05D000548 ORTHO05D001552 1.7e-06 55.5 27 74.1
Sopen05g004870 Solanum pennellii HOM05D000548 ORTHO05D001552 1.7e-06 55.5 27 74.1
CANSAT80G2220 Cannabis sativa HOM05D000548 ORTHO05D001552 2.2e-06 55.1 28 78.6
ECA232G4260 Erigeron canadensis HOM05D000548 ORTHO05D001552 2.2e-06 55.1 28 75.0
Gohir.1Z049445 Gossypium hirsutum HOM05D000548 ORTHO05D001552 2.2e-06 55.1 28 75.0
Gohir.A12G175100 Gossypium hirsutum HOM05D000548 ORTHO05D001552 2.2e-06 55.1 28 75.0
Gohir.D12G177900 Gossypium hirsutum HOM05D000548 ORTHO05D001552 2.2e-06 55.1 28 75.0
Gorai.008G190100 Gossypium raimondii HOM05D000548 ORTHO05D001552 2.2e-06 55.1 28 75.0
Phvul.003G194400 Phaseolus vulgaris HOM05D000548 ORTHO05D001552 2.2e-06 55.1 28 75.0
Rhsim08G0161400 Rhododendron simsii HOM05D000548 ORTHO05D001552 2.2e-06 55.1 28 78.6
TPR.G38429 Trifolium pratense HOM05D000548 ORTHO05D001552 2.2e-06 55.1 28 75.0
Aa31LG4G4990 Aethionema arabicum HOM05D000548 ORTHO05D001552 2.9e-06 54.7 28 75.0
Ciclev10018535m.g Citrus clementina HOM05D000548 ORTHO05D001552 2.9e-06 54.7 28 78.6
Dinv31615 Davidia involucrata HOM05D000548 ORTHO05D001552 2.9e-06 54.7 27 74.1
FvH4_4g26990 Fragaria vesca HOM05D000548 ORTHO05D001552 2.9e-06 54.7 27 74.1
FAN12G2934 Fragaria x ananassa HOM05D000548 ORTHO05D001552 2.9e-06 54.7 27 74.1
FAN12G3869 Fragaria x ananassa HOM05D000548 ORTHO05D001552 2.9e-06 54.7 27 74.1
Lalb_Chr07g0182361 Lupinus albus HOM05D000548 ORTHO05D001552 2.9e-06 54.7 28 75.0
Manes.06G097400 Manihot esculenta HOM05D000548 ORTHO05D001552 2.9e-06 54.7 28 78.6
Nitab4.5_0005528g0100 Nicotiana tabacum HOM05D000548 ORTHO05D001552 2.9e-06 54.7 27 74.1
PGR119G0673 Punica granatum HOM05D000548 ORTHO05D001552 2.9e-06 54.7 27 70.4
unitig_22.g6863 Utricularia gibba HOM05D000548 ORTHO05D001552 2.9e-06 54.7 27 70.4
MSTRG.856 Avicennia marina HOM05D000548 ORTHO05D001552 3.7e-06 54.3 27 70.4
A07p40440 Brassica napus HOM05D000548 ORTHO05D001552 3.7e-06 54.3 28 75.0
C06p48790 Brassica napus HOM05D000548 ORTHO05D001552 3.7e-06 54.3 28 75.0
Cpa.g.sc3.488 Carica papaya HOM05D000548 ORTHO05D001552 3.7e-06 54.3 27 74.1
Ciclev10014065m.g Citrus clementina HOM05D000548 ORTHO05D001552 3.7e-06 54.3 27 70.4
Duzib248G0424 Durio zibethinus HOM05D000548 ORTHO05D001552 3.7e-06 54.3 27 70.4
Lsat_1_v5_gn_8_40260 Lactuca sativa HOM05D000548 ORTHO05D001552 3.7e-06 54.3 27 70.4
SEGI_40476 Sequoiadendron giganteum HOM05D000548 ORTHO05D001552 3.7e-06 54.3 27 74.1
SGA_v2.0_scaffold56G20070 Striga asiatica HOM05D000548 ORTHO05D001552 3.7e-06 54.3 28 78.6
Thecc.02G224900 Theobroma cacao HOM05D000548 ORTHO05D001552 3.7e-06 54.3 27 70.4
Actinidia37668 Actinidia chinensis HOM05D000548 ORTHO05D001552 4.9e-06 53.9 24 83.3
Aa31LG7G3670 Aethionema arabicum HOM05D000548 ORTHO05D001552 4.9e-06 53.9 28 75.0
BcaB07g31915 Brassica carinata HOM05D000548 ORTHO05D001552 4.9e-06 53.9 28 75.0
CANSAT01G1036 Cannabis sativa HOM05D000548 ORTHO05D001552 4.9e-06 53.9 27 70.4
CAN.G999.33 Capsicum annuum HOM05D000548 ORTHO05D001552 4.9e-06 53.9 28 75.0
Haze_00626 Corylus avellana HOM05D000548 ORTHO05D001552 4.9e-06 53.9 27 70.4
Thhalv10006659m.g Eutrema salsugineum HOM05D000548 ORTHO05D001552 4.9e-06 53.9 28 75.0
Glyma.09G115100 Glycine max HOM05D000548 ORTHO05D001552 4.9e-06 53.9 28 71.4
MBI01_g01223_MAGBIO Magnolia biondii HOM05D000548 ORTHO05D001552 4.9e-06 53.9 28 75.0
Nn1g00632 Nelumbo nucifera HOM05D000548 ORTHO05D001552 4.9e-06 53.9 27 74.1
QL10p014814 Quercus lobata HOM05D000548 ORTHO05D001552 4.9e-06 53.9 27 77.8
vmacro19420 Vaccinium macrocarpon HOM05D000548 ORTHO05D001552 4.9e-06 53.9 28 78.6
AL2G34650 Arabidopsis lyrata HOM05D000548 ORTHO05D001552 6.4e-06 53.5 28 71.4
arahy.Tifrunner.gnm1.ann1.02RLW9 Arachis hypogaea HOM05D000548 ORTHO05D001552 6.4e-06 53.5 28 75.0
arahy.Tifrunner.gnm1.ann1.IQ8A0Z Arachis hypogaea HOM05D000548 ORTHO05D001552 6.4e-06 53.5 28 75.0
MSTRG.11406 Avicennia marina HOM05D000548 ORTHO05D001552 6.4e-06 53.5 28 78.6
BcaC08g46917 Brassica carinata HOM05D000548 ORTHO05D001552 6.4e-06 53.5 28 71.4
CAN.G1425.22 Capsicum annuum HOM05D000548 ORTHO05D001552 6.4e-06 53.5 27 70.4
Thhalv10018022m.g Eutrema salsugineum HOM05D000548 ORTHO05D001552 6.4e-06 53.5 28 71.4
FAN07G2112 Fragaria x ananassa HOM05D000548 ORTHO05D001552 6.4e-06 53.5 27 70.4
Medtr8g104410 Medicago truncatula HOM05D000548 ORTHO05D001552 6.4e-06 53.5 27 70.4
Oeu034218.1 Olea europaea HOM05D000548 ORTHO05D001552 6.4e-06 53.5 27 70.4
Psat7g010880 Pisum sativum HOM05D000548 ORTHO05D001552 6.4e-06 53.5 27 70.4
Rhsim08G0131900 Rhododendron simsii HOM05D000548 ORTHO05D001552 6.4e-06 53.5 27 74.1
Sp1g16890 Schrenkiella parvula HOM05D000548 ORTHO05D001552 6.4e-06 53.5 28 75.0
TPR.G32705 Trifolium pratense HOM05D000548 ORTHO05D001552 6.4e-06 53.5 27 70.4
AT3G18290 Arabidopsis thaliana HOM05D000548 ORTHO05D001552 8.4e-06 53.1 27 70.4
EL10Ac5g10918 Beta vulgaris HOM05D000548 ORTHO05D001552 8.4e-06 53.1 28 78.6
BcaC08g46902 Brassica carinata HOM05D000548 ORTHO05D001552 8.4e-06 53.1 28 71.4
Carub.0003s1807 Capsella rubella HOM05D000548 ORTHO05D001552 8.4e-06 53.1 27 70.4
CARHR093650 Cardamine hirsuta HOM05D000548 ORTHO05D001552 8.4e-06 53.1 27 70.4
CiPaw.12G019300 Carya illinoinensis HOM05D000548 ORTHO05D001552 8.4e-06 53.1 26 76.9
Cc04_g15950 Coffea canephora HOM05D000548 ORTHO05D001552 8.4e-06 53.1 28 75.0
Cc06_g20530 Coffea canephora HOM05D000548 ORTHO05D001552 8.4e-06 53.1 28 75.0
Oeu057740.1 Olea europaea HOM05D000548 ORTHO05D001552 8.4e-06 53.1 27 66.7
Pp3c25_14500 Physcomitrium patens HOM05D000548 ORTHO05D001552 8.4e-06 53.1 24 79.2
Pp3c25_14501 Physcomitrium patens HOM05D000548 ORTHO05D001552 8.4e-06 53.1 24 79.2
Pp3c6_1960 Physcomitrium patens HOM05D000548 ORTHO05D001552 8.4e-06 53.1 24 79.2
Sp5g29880 Schrenkiella parvula HOM05D000548 ORTHO05D001552 8.4e-06 53.1 28 67.9
SGA_v2.0_scaffold38G14966 Striga asiatica HOM05D000548 ORTHO05D001552 8.4e-06 53.1 27 70.4


User provided reference genes

Program Settings