Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN04G1325 Fragaria x ananassa HOM05D006891 ORTHO05D008671 5.1e-171 604.4 312 100.0
FvH4_5g09430 Fragaria vesca HOM05D006891 ORTHO05D008671 5.8e-167 590.9 315 97.1
FAN08G0367 Fragaria x ananassa HOM05D006891 ORTHO05D008671 2.4e-165 585.5 311 97.4
RcHm_v2.0_Chr7g0188761 Rosa chinensis HOM05D006891 ORTHO05D008671 4.7e-161 571.2 316 93.0
FAN18G0906 Fragaria x ananassa HOM05D006891 ORTHO05D008671 1.8e-160 569.3 318 93.7
MD14G1147900 Malus domestica HOM05D006891 ORTHO05D008671 1.3e-147 526.6 322 85.7
Prupe.5G142500 Prunus persica HOM05D006891 ORTHO05D008671 8.7e-147 523.9 321 86.0
MD06G1131500 Malus domestica HOM05D006891 ORTHO05D008671 1.4e-144 516.5 324 84.6
Dinv13725 Davidia involucrata HOM05D006891 ORTHO05D008671 1.8e-131 473.0 327 74.9
TWI39G1149 Tripterygium wilfordii HOM05D006891 ORTHO05D008671 2.3e-131 472.6 328 76.5
Cfa018711 Carpinus fangiana HOM05D006891 ORTHO05D008671 3.3e-130 468.8 325 76.3
Atru.chr6.1910 Acer truncatum HOM05D006891 ORTHO05D008671 7.4e-130 467.6 320 76.2
Haze_07102 Corylus avellana HOM05D006891 ORTHO05D008671 1.6e-129 466.5 325 76.0
Gorai.001G054400 Gossypium raimondii HOM05D006891 ORTHO05D008671 8.2e-129 464.2 326 74.8
TAR475G0005 Trochodendron aralioides HOM05D006891 ORTHO05D008671 1.1e-128 463.8 330 74.2
Actinidia18305 Actinidia chinensis HOM05D006891 ORTHO05D008671 1.8e-128 463.0 319 77.1
Nn3g16285 Nelumbo nucifera HOM05D006891 ORTHO05D008671 2.4e-128 462.6 325 74.8
Migut.D01186 Erythranthe guttata HOM05D006891 ORTHO05D008671 3.1e-128 462.2 322 74.2
Gohir.D07G051300 Gossypium hirsutum HOM05D006891 ORTHO05D008671 3.1e-128 462.2 326 74.5
Gohir.A07G047000 Gossypium hirsutum HOM05D006891 ORTHO05D008671 4.1e-128 461.8 326 74.5
MSTRG.4642 Avicennia marina HOM05D006891 ORTHO05D008671 2.0e-127 459.5 322 74.5
Ciclev10032123m.g Citrus clementina HOM05D006891 ORTHO05D008671 1.0e-126 457.2 321 74.8
Cpa.g.sc13.164 Carica papaya HOM05D006891 ORTHO05D008671 1.7e-126 456.4 324 76.5
CiPaw.12G001000 Carya illinoinensis HOM05D006891 ORTHO05D008671 2.2e-126 456.1 326 74.2
Nitab4.5_0000976g0010 Nicotiana tabacum HOM05D006891 ORTHO05D008671 2.2e-126 456.1 324 73.5
SGA_v2.0_scaffold40G15677 Striga asiatica HOM05D006891 ORTHO05D008671 2.2e-126 456.1 321 73.8
QL10p000565 Quercus lobata HOM05D006891 ORTHO05D008671 5.0e-126 454.9 327 74.3
PGSC0003DMG400014243 Solanum tuberosum HOM05D006891 ORTHO05D008671 6.5e-126 454.5 326 73.0
Solyc03g118240.4 Solanum lycopersicum HOM05D006891 ORTHO05D008671 1.4e-125 453.4 326 73.0
Thecc.03G139800 Theobroma cacao HOM05D006891 ORTHO05D008671 1.4e-125 453.4 327 74.0
CSS0004907 Camellia sinensis var. sinensis HOM05D006891 ORTHO05D008671 2.5e-125 452.6 321 72.9
Sopen03g037150 Solanum pennellii HOM05D006891 ORTHO05D008671 2.5e-125 452.6 326 73.0
COL.COLO4_37249 Corchorus olitorius HOM05D006891 ORTHO05D008671 3.2e-125 452.2 324 75.0
Duzib205G0665 Durio zibethinus HOM05D006891 ORTHO05D008671 3.2e-125 452.2 324 75.6
Rhsim08G0196800 Rhododendron simsii HOM05D006891 ORTHO05D008671 4.2e-125 451.8 320 74.1
VMungo0251G3529 Vigna mungo HOM05D006891 ORTHO05D008671 4.2e-125 451.8 326 74.8
Glyma.05G200500 Glycine max HOM05D006891 ORTHO05D008671 1.2e-124 450.3 326 73.9
Eucgr.G02043 Eucalyptus grandis HOM05D006891 ORTHO05D008671 1.6e-124 449.9 328 72.9
Sabra12G0078900 Salix brachista HOM05D006891 ORTHO05D008671 1.0e-123 447.2 341 70.7
Glyma.08G007900 Glycine max HOM05D006891 ORTHO05D008671 1.8e-123 446.4 327 73.1
Phvul.002G281900 Phaseolus vulgaris HOM05D006891 ORTHO05D008671 1.8e-123 446.4 326 73.6
CAN.G843.14 Capsicum annuum HOM05D006891 ORTHO05D008671 8.7e-123 444.1 319 71.8
PGR142G3013 Punica granatum HOM05D006891 ORTHO05D008671 1.1e-122 443.7 293 78.8
DCAR_025652 Daucus carota HOM05D006891 ORTHO05D008671 1.9e-122 443.0 320 72.5
Lsat_1_v5_gn_4_84561 Lactuca sativa HOM05D006891 ORTHO05D008671 2.5e-122 442.6 316 72.5
Lj4g0024376 Lotus japonicus HOM05D006891 ORTHO05D008671 2.5e-122 442.6 325 71.7
Aa31LG7G10590 Aethionema arabicum HOM05D006891 ORTHO05D008671 7.4e-122 441.0 317 74.4
Lj9C486T5 Lonicera japonica HOM05D006891 ORTHO05D008671 2.8e-121 439.1 323 71.2
MELO3C026160.2 Cucumis melo HOM05D006891 ORTHO05D008671 8.2e-121 437.6 305 76.1
HanXRQChr09g0273851 Helianthus annuus HOM05D006891 ORTHO05D008671 1.1e-120 437.2 310 73.5
HanXRQChr11g0350211 Helianthus annuus HOM05D006891 ORTHO05D008671 2.4e-120 436.0 310 73.5
Lalb_Chr13g0296991 Lupinus albus HOM05D006891 ORTHO05D008671 2.4e-120 436.0 323 72.1
vmacro19179 Vaccinium macrocarpon HOM05D006891 ORTHO05D008671 3.1e-120 435.6 325 72.3
Sed0026594 Sechium edule HOM05D006891 ORTHO05D008671 5.3e-120 434.9 304 74.3
CARHR232470 Cardamine hirsuta HOM05D006891 ORTHO05D008671 6.9e-120 434.5 269 81.8
ClCG06G018350 Citrullus lanatus HOM05D006891 ORTHO05D008671 9.0e-120 434.1 309 74.4
PSO017G2699 Papaver somniferum HOM05D006891 ORTHO05D008671 2.6e-119 432.6 329 69.6
Carub.0007s1596 Capsella rubella HOM05D006891 ORTHO05D008671 3.4e-119 432.2 269 81.0
CsaV3_1G000080 Cucumis sativus L. HOM05D006891 ORTHO05D008671 4.5e-119 431.8 267 81.6
Peaxi162Scf00314g00625 Petunia axillaris HOM05D006891 ORTHO05D008671 4.5e-119 431.8 319 70.2
A01p16330 Brassica napus HOM05D006891 ORTHO05D008671 7.7e-119 431.0 271 80.8
Manes.06G126400 Manihot esculenta HOM05D006891 ORTHO05D008671 7.7e-119 431.0 320 71.9
BraA01t01588Z Brassica rapa HOM05D006891 ORTHO05D008671 1.0e-118 430.6 271 80.8
CDE11G0769 Ceratophyllum demersum HOM05D006891 ORTHO05D008671 1.7e-118 429.9 316 70.9
MBI04_g35563_MAGBIO Magnolia biondii HOM05D006891 ORTHO05D008671 2.2e-118 429.5 326 70.6
Sp7g23060 Schrenkiella parvula HOM05D006891 ORTHO05D008671 2.2e-118 429.5 269 79.6
BcaC09g50812 Brassica carinata HOM05D006891 ORTHO05D008671 2.9e-118 429.1 271 80.1
BcaNung03997 Brassica carinata HOM05D006891 ORTHO05D008671 3.8e-118 428.7 271 80.4
Thhalv10025780m.g Eutrema salsugineum HOM05D006891 ORTHO05D008671 5.0e-118 428.3 300 74.7
AL7G28070 Arabidopsis lyrata HOM05D006891 ORTHO05D008671 6.5e-118 427.9 269 80.3
C01p20480 Brassica napus HOM05D006891 ORTHO05D008671 8.5e-118 427.6 271 79.7
BolC1t01979H Brassica oleracea HOM05D006891 ORTHO05D008671 8.5e-118 427.6 271 79.7
AT4G25080 Arabidopsis thaliana HOM05D006891 ORTHO05D008671 1.1e-117 427.2 320 73.8
PSO478G3300 Papaver somniferum HOM05D006891 ORTHO05D008671 1.9e-117 426.4 329 68.7
Aqoxy5G03144 Aquilegia oxysepala HOM05D006891 ORTHO05D008671 3.2e-117 425.6 315 68.3
BraA03t14640Z Brassica rapa HOM05D006891 ORTHO05D008671 4.2e-117 425.2 269 79.6
C07p53960 Brassica napus HOM05D006891 ORTHO05D008671 1.6e-116 423.3 318 71.7
A03p55730 Brassica napus HOM05D006891 ORTHO05D008671 4.6e-116 421.8 269 79.2
Sc04g0000210 Simmondsia chinensis HOM05D006891 ORTHO05D008671 4.6e-116 421.8 331 68.3
SalBow1G6359 Salvia bowleyana HOM05D006891 ORTHO05D008671 1.3e-113 413.7 315 71.1
arahy.Tifrunner.gnm1.ann1.5G0V08 Arachis hypogaea HOM05D006891 ORTHO05D008671 4.8e-113 411.8 330 67.9
BolC7t45886H Brassica oleracea HOM05D006891 ORTHO05D008671 8.2e-113 411.0 318 70.8
ECA232G2217 Erigeron canadensis HOM05D006891 ORTHO05D008671 5.3e-112 408.3 315 69.2
Medtr8g100120 Medicago truncatula HOM05D006891 ORTHO05D008671 7.7e-111 404.4 326 67.2
Psat7g039320 Pisum sativum HOM05D006891 ORTHO05D008671 4.7e-108 395.2 324 66.4
Potri.012G106600 Populus trichocarpa HOM05D006891 ORTHO05D008671 1.8e-107 393.3 228 84.2
CANSAT56G0245 Cannabis sativa HOM05D006891 ORTHO05D008671 2.3e-107 392.9 320 66.6
CANSAT56G1732 Cannabis sativa HOM05D006891 ORTHO05D008671 2.3e-107 392.9 320 66.6
AUR62009532 Chenopodium quinoa HOM05D006891 ORTHO05D008671 3.9e-107 392.1 258 75.2
GSVIVG01008643001 Vitis vinifera HOM05D006891 ORTHO05D008671 6.7e-107 391.3 328 67.1
HPP92_020658 Vanilla planifolia HOM05D006891 ORTHO05D008671 1.5e-106 390.2 319 65.8
arahy.Tifrunner.gnm1.ann1.0QZ944 Arachis hypogaea HOM05D006891 ORTHO05D008671 2.2e-105 386.3 330 65.8
unitig_736.g22830 Utricularia gibba HOM05D002810 ORTHO05D003983 1.4e-104 383.6 311 67.5
TPR.G12963 Trifolium pratense HOM05D006891 ORTHO05D008671 2.0e-103 379.8 286 70.6
Hund02505 Selenicereus undatus HOM05D006891 ORTHO05D008671 5.0e-102 375.2 231 80.5
THA.LOC104811559 Tarenaya hassleriana HOM05D006891 ORTHO05D008671 1.5e-101 373.6 320 64.4
ATR0579G076 Amborella trichopoda HOM05D006891 ORTHO05D008671 7.2e-101 371.3 239 77.8
SEGI_33809 Sequoiadendron giganteum HOM05D006891 ORTHO05D008671 3.6e-100 369.0 304 63.5
AUR62041695 Chenopodium quinoa HOM05D006891 ORTHO05D008671 6.7e-99 364.8 309 63.4
AagrBONN_evm.TU.Sc2ySwM_368.2875 Anthoceros agrestis HOM05D006891 ORTHO05D008671 1.7e-97 360.1 266 68.8
Pp3c12_24890 Physcomitrium patens HOM05D006891 ORTHO05D008671 4.1e-96 355.5 264 68.2
SMO115G0098 Selaginella moellendorffii HOM05D006891 ORTHO05D008671 5.3e-96 355.1 312 61.5
Ah.11g046860 Amaranthus hybridus HOM05D006891 ORTHO05D008671 6.8e-91 338.2 207 79.2
Mapoly0112s0034 Marchantia polymorpha HOM05D006891 ORTHO05D008671 1.8e-88 330.1 261 63.2
Cre12.g498550 Chlamydomonas reinhardtii HOM05D006891 ORTHO05D008671 8.5e-86 321.2 266 60.9
EL10Ac5g11293 Beta vulgaris HOM05D006891 ORTHO05D008671 2.5e-85 319.7 271 61.3
Zm00001eb269720 Zea mays HOM05D006891 ORTHO05D008671 3.1e-80 302.8 305 55.4
MCO11G158 Micromonas commoda HOM05D006891 ORTHO05D008671 1.8e-75 287.0 274 54.7
Ca_16812_v3 Cicer arietinum L. HOM05D006891 ORTHO05D008671 3.6e-68 262.7 226 65.5
unitig_899.g14822 Utricularia gibba HOM05D002810 ORTHO05D003983 4.7e-68 262.3 303 54.1
Hma1.2p1_0577F.1_g182340 Hydrangea macrophylla HOM05D006891 ORTHO05D008671 8.1e-60 235.0 198 64.1
Potri.015G105702 Populus trichocarpa HOM05D006891 ORTHO05D008671 1.2e-58 231.1 230 57.8
AUR62044303 Chenopodium quinoa HOM05D006891 ORTHO05D008671 6.4e-57 225.3 239 51.9
Dinv23219 Davidia involucrata HOM05D006891 ORTHO05D008671 1.1e-51 208.0 154 74.0
Os06g0132400 Oryza sativa ssp. japonica HOM05D006891 ORTHO05D008671 1.7e-38 164.1 104 71.2
SGA_v2.0_scaffold377G50317 Striga asiatica HOM05D006891 ORTHO05D008671 4.3e-21 106.3 129 50.4
CBR_g32078 Chara braunii HOM05D006891 ORTHO05D008671 1.4e-19 101.3 72 66.7
Eucgr.G02044 Eucalyptus grandis HOM05D006891 ORTHO05D008671 1.7e-09 67.8 64 57.8
BraA03t14643Z Brassica rapa HOM05D006891 ORTHO05D033303 7.2e-08 62.4 64 57.8
Ca_29372_v3 Cicer arietinum L. HOM05D004373 ORTHO05D005203 3.9e-06 56.6 131 33.6


User provided reference genes

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