Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN04G1278 Fragaria x ananassa HOM05D000034 ORTHO05D000037 1.9e-53 212.2 106 100.0
FAN14G2169 Fragaria x ananassa HOM05D000034 ORTHO05D000037 9.8e-26 120.2 70 84.3
Lj4P748T21 Lonicera japonica HOM05D000034 ORTHO05D000037 4.1e-24 114.8 70 74.3
Lj7P752T22 Lonicera japonica HOM05D000034 ORTHO05D000037 1.2e-23 113.2 70 71.4
Lj5P761T6 Lonicera japonica HOM05D000034 ORTHO05D000037 2.0e-23 112.5 70 72.9
FvH4_6g20420 Fragaria vesca HOM05D000034 ORTHO05D001698 6.0e-23 110.9 70 77.1
Lju470C3T13 Lonicera japonica HOM05D000034 ORTHO05D000037 3.0e-22 108.6 70 71.4
Lj2P952T8 Lonicera japonica HOM05D000034 ORTHO05D000037 4.3e-21 104.8 70 68.6
FAN23G2769 Fragaria x ananassa HOM05D000034 ORTHO05D000037 1.8e-19 99.4 70 71.4
Oeu039329.1 Olea europaea HOM05D000034 ORTHO05D000037 1.2e-18 96.7 70 65.7
Atru.chr7.11 Acer truncatum HOM05D000034 ORTHO05D000037 3.4e-18 95.1 70 65.7
Lj4P369T4 Lonicera japonica HOM05D000034 ORTHO05D000037 3.4e-18 95.1 70 68.6
Oeu015819.1 Olea europaea HOM05D000034 ORTHO05D000037 5.8e-18 94.4 70 64.3
Oeu048641.1 Olea europaea HOM05D000034 ORTHO05D000037 9.8e-18 93.6 70 62.9
TPR.G25978 Trifolium pratense HOM05D000034 ORTHO05D000037 2.2e-17 92.4 70 61.4
Atru.chr9.928 Acer truncatum HOM05D000034 ORTHO05D000037 3.7e-17 91.7 70 64.3
Oeu050498.1 Olea europaea HOM05D000034 ORTHO05D000037 3.7e-17 91.7 70 62.9
Lj5P793T12 Lonicera japonica HOM05D000034 ORTHO05D000037 4.9e-17 91.3 70 61.4
AL8G20770 Arabidopsis lyrata HOM05D000034 ORTHO05D000037 1.4e-16 89.7 70 60.0
Lj3C974T6 Lonicera japonica HOM05D000034 ORTHO05D001698 2.4e-16 89.0 70 61.4
Lj4C317T2 Lonicera japonica HOM05D000034 ORTHO05D001698 2.4e-16 89.0 73 58.9
BcaB01g00914 Brassica carinata HOM05D000034 ORTHO05D000037 5.4e-16 87.8 70 58.6
Lj2P433T6 Lonicera japonica HOM05D000034 ORTHO05D000037 5.4e-16 87.8 70 61.4
Sp1g32750 Schrenkiella parvula HOM05D000034 ORTHO05D000037 7.1e-16 87.4 69 60.9
Atru.chr1.1790 Acer truncatum HOM05D000034 ORTHO05D000037 2.1e-15 85.9 70 60.0
Atru.chr1.1798 Acer truncatum HOM05D000034 ORTHO05D000037 2.1e-15 85.9 70 60.0
Atru.chr5.2050 Acer truncatum HOM05D000034 ORTHO05D000037 2.1e-15 85.9 70 60.0
Atru.chr12.1816 Acer truncatum HOM05D000034 ORTHO05D000037 4.6e-15 84.7 70 58.6
RcHm_v2.0_Chr6g0281391 Rosa chinensis HOM05D000034 ORTHO05D000037 4.6e-15 84.7 70 60.0
RcHm_v2.0_Chr5g0050651 Rosa chinensis HOM05D000034 ORTHO05D000037 7.8e-15 84.0 70 60.0
Oeu035951.1 Olea europaea HOM05D000034 ORTHO05D000037 1.0e-14 83.6 70 61.4
C05p18830 Brassica napus HOM05D001678 ORTHO05D001698 1.3e-14 83.2 73 52.1
BcaC02g10125 Brassica carinata HOM05D000034 ORTHO05D000037 1.7e-14 82.8 70 60.0
C05p38790 Brassica napus HOM05D001678 ORTHO05D001698 1.7e-14 82.8 73 52.1
C07p02270 Brassica napus HOM05D001678 ORTHO05D001698 2.3e-14 82.4 73 52.1
BolC7t40637H Brassica oleracea HOM05D001678 ORTHO05D001698 2.3e-14 82.4 73 52.1
Atru.chr3.1300 Acer truncatum HOM05D000034 ORTHO05D000037 3.0e-14 82.0 70 57.1
BolC5t32619H Brassica oleracea HOM05D001678 ORTHO05D001698 3.9e-14 81.6 73 50.7
AL6G14840 Arabidopsis lyrata HOM05D000034 ORTHO05D000037 6.6e-14 80.9 70 54.3
Atru.chr2.3567 Acer truncatum HOM05D000034 ORTHO05D000037 1.5e-13 79.7 70 57.1
BolC6t38245H Brassica oleracea HOM05D000034 ORTHO05D000037 1.5e-13 79.7 70 52.9
Atru.chr8.1129 Acer truncatum HOM05D000034 ORTHO05D000037 1.9e-13 79.3 70 54.3
Lj1P89T28 Lonicera japonica HOM05D000034 ORTHO05D000037 4.3e-13 78.2 70 55.7
BolC9t56511H Brassica oleracea HOM05D001678 ORTHO05D001698 1.2e-12 76.6 70 52.9
Thhalv10029193m.g Eutrema salsugineum HOM05D000034 ORTHO05D000037 1.2e-12 76.6 71 52.1
BolC2t11198H Brassica oleracea HOM05D000034 ORTHO05D000037 3.6e-12 75.1 70 51.4
BolC3t21566H Brassica oleracea HOM05D001678 ORTHO05D001698 3.6e-12 75.1 70 52.9
Atru.chr4.626 Acer truncatum HOM05D000034 ORTHO05D000037 4.7e-12 74.7 70 52.9
Oeu060644.1 Olea europaea HOM05D000034 ORTHO05D000037 3.1e-11 72.0 59 61.0
Atru.chr5.2759 Acer truncatum HOM05D000034 ORTHO05D000037 1.5e-10 69.7 57 59.6
Atru.chr9.764 Acer truncatum HOM05D000034 ORTHO05D000037 1.5e-10 69.7 47 70.2
Atru.chr12.2215 Acer truncatum HOM05D000034 ORTHO05D000037 4.9e-09 64.7 56 58.9
Lj1P869T41 Lonicera japonica HOM05D000034 ORTHO05D000037 1.2e-07 60.1 46 63.0
CANSAT01G0970 Cannabis sativa HOM05D000034 ORTHO05D000037 2.7e-07 58.9 70 44.3
CANSAT25G2314 Cannabis sativa HOM05D000034 ORTHO05D000037 2.7e-07 58.9 70 44.3
CANSAT54G0349 Cannabis sativa HOM05D000034 ORTHO05D000037 2.7e-07 58.9 70 44.3
Atru.chr11.923 Acer truncatum HOM05D000034 ORTHO05D000037 6.0e-07 57.8 54 53.7
Nn1g08452 Nelumbo nucifera HOM05D000034 ORTHO05D000037 6.0e-07 57.8 69 39.1
AL5G20820 Arabidopsis lyrata HOM05D000034 ORTHO05D000037 7.8e-07 57.4 53 50.9
PSO782G5727 Papaver somniferum HOM05D000034 ORTHO05D000037 1.0e-06 57.0 69 39.1
PSO170G2678 Papaver somniferum HOM05D000034 ORTHO05D000037 1.3e-06 56.6 69 39.1
VMungo0464G0508 Vigna mungo HOM05D000034 ORTHO05D000037 1.3e-06 56.6 69 43.5
Cc07_g19730 Coffea canephora HOM05D000034 ORTHO05D000037 1.7e-06 56.2 68 41.2
Oeu035072.1 Olea europaea HOM05D000034 ORTHO05D000037 1.7e-06 56.2 72 37.5
PSO063G3806 Papaver somniferum HOM05D000034 ORTHO05D000037 1.7e-06 56.2 69 40.6
Atru.chr2.1460 Acer truncatum HOM05D000034 ORTHO05D000037 2.3e-06 55.8 52 53.8
PSO017G6925 Papaver somniferum HOM05D000034 ORTHO05D000037 2.3e-06 55.8 69 39.1
PSO782G5444 Papaver somniferum HOM05D000034 ORTHO05D000037 2.3e-06 55.8 69 40.6
GSVIVG01000254001 Vitis vinifera HOM05D000034 ORTHO05D000037 3.0e-06 55.5 69 39.1
Nn7g37677 Nelumbo nucifera HOM05D000034 ORTHO05D000037 3.9e-06 55.1 70 41.4
PSO017G5821 Papaver somniferum HOM05D000034 ORTHO05D000037 3.9e-06 55.1 69 39.1
PSO063G2661 Papaver somniferum HOM05D000034 ORTHO05D000037 3.9e-06 55.1 69 39.1
PSO170G3831 Papaver somniferum HOM05D000034 ORTHO05D000037 3.9e-06 55.1 69 39.1
PSO732G0275 Papaver somniferum HOM05D000034 ORTHO05D000037 3.9e-06 55.1 69 39.1
EL10Ac6g13234 Beta vulgaris HOM05D000034 ORTHO05D002688 5.1e-06 54.7 76 36.8
Lj2g0028014 Lotus japonicus HOM05D000034 ORTHO05D000037 5.1e-06 54.7 69 43.5
PSO675G0372 Papaver somniferum HOM05D000034 ORTHO05D000037 5.1e-06 54.7 69 39.1
EL10Ac8g20166 Beta vulgaris HOM05D000034 ORTHO05D000037 6.6e-06 54.3 70 40.0
Dinv18425 Davidia involucrata HOM05D000034 ORTHO05D000037 6.6e-06 54.3 69 42.0
PSO210G1286 Papaver somniferum HOM05D000034 ORTHO05D000037 6.6e-06 54.3 69 39.1
PSO339G5100 Papaver somniferum HOM05D000034 ORTHO05D000037 6.6e-06 54.3 69 39.1
PSO339G5127 Papaver somniferum HOM05D000034 ORTHO05D000037 6.6e-06 54.3 69 39.1
PSO541G0261 Papaver somniferum HOM05D000034 ORTHO05D000037 6.6e-06 54.3 69 39.1
PSO541G3074 Papaver somniferum HOM05D000034 ORTHO05D000037 6.6e-06 54.3 69 39.1
PSO541G3789 Papaver somniferum HOM05D000034 ORTHO05D000037 6.6e-06 54.3 69 39.1
THA.LOC104800545 Tarenaya hassleriana HOM05D000034 ORTHO05D000037 6.6e-06 54.3 69 39.1
arahy.Tifrunner.gnm1.ann1.TW33UK Arachis hypogaea HOM05D000034 ORTHO05D000037 8.6e-06 53.9 69 36.2
Lalb_Chr22g0353531 Lupinus albus HOM05D000034 ORTHO05D000037 8.6e-06 53.9 69 42.0
MD06G1227900 Malus domestica HOM05D000034 ORTHO05D000037 8.6e-06 53.9 69 43.5


User provided reference genes

Program Settings