Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN04G1212 Fragaria x ananassa HOM05D000086 ORTHO05D004422 1.2e-32 142.5 70 100.0
FvH4_5g10171 Fragaria vesca HOM05D000086 ORTHO05D004422 2.0e-27 125.2 70 90.0
FAN18G0327 Fragaria x ananassa HOM05D000086 ORTHO05D004422 3.8e-26 120.9 71 88.7
FAN01G0686 Fragaria x ananassa HOM05D000086 ORTHO05D004422 4.7e-16 87.4 77 66.2
FAN03G0924 Fragaria x ananassa HOM05D000086 ORTHO05D004422 4.7e-16 87.4 77 67.5
FAN10G0744 Fragaria x ananassa HOM05D000086 ORTHO05D004422 1.0e-15 86.3 77 66.2
RcHm_v2.0_Chr1g0344271 Rosa chinensis HOM05D000086 ORTHO05D004422 1.4e-15 85.9 82 64.6
FvH4_7g08860 Fragaria vesca HOM05D000086 ORTHO05D004422 5.2e-15 84.0 78 66.7
FAN06G2163 Fragaria x ananassa HOM05D000086 ORTHO05D004422 4.4e-14 80.9 78 65.4
FAN10G2821 Fragaria x ananassa HOM05D000086 ORTHO05D004422 2.2e-13 78.6 77 64.9
Thecc.01G402200 Theobroma cacao HOM05D000086 ORTHO05D004422 2.1e-08 62.0 83 49.4
Duzib138G0523 Durio zibethinus HOM05D000086 ORTHO05D004422 2.7e-08 61.6 83 47.0
Duzib133G0943 Durio zibethinus HOM05D000086 ORTHO05D004422 4.7e-08 60.8 79 50.6
Ciclev10020616m.g Citrus clementina HOM05D000086 ORTHO05D004422 6.1e-08 60.5 82 46.3
Rhsim01G0143200 Rhododendron simsii HOM05D000086 ORTHO05D004422 8.0e-08 60.1 73 49.3
CiPaw.13G022200 Carya illinoinensis HOM05D000086 ORTHO05D004422 1.0e-07 59.7 94 42.6
Gohir.D08G065600 Gossypium hirsutum HOM05D000086 ORTHO05D004422 1.4e-07 59.3 80 48.8
Gorai.004G067900 Gossypium raimondii HOM05D000086 ORTHO05D004422 1.4e-07 59.3 80 48.8
SGA_v2.0_scaffold52G19265 Striga asiatica HOM05D000086 ORTHO05D004422 1.4e-07 59.3 91 44.0
COL.COLO4_12355 Corchorus olitorius HOM05D000086 ORTHO05D004422 1.8e-07 58.9 79 48.1
CSS0017499 Camellia sinensis var. sinensis HOM05D000086 ORTHO05D004422 2.3e-07 58.5 79 46.8
THA.LOC104817178 Tarenaya hassleriana HOM05D000086 ORTHO05D004422 2.3e-07 58.5 81 46.9
AL5G42430 Arabidopsis lyrata HOM05D000086 ORTHO05D004422 3.0e-07 58.2 77 49.4
Carub.0005s2696 Capsella rubella HOM05D000086 ORTHO05D004422 3.0e-07 58.2 77 50.6
CARHR170530 Cardamine hirsuta HOM05D000086 ORTHO05D004422 3.0e-07 58.2 77 50.6
GSVIVG01018343001 Vitis vinifera HOM05D000086 ORTHO05D004422 3.0e-07 58.2 89 40.4
AT3G60220 Arabidopsis thaliana HOM05D000086 ORTHO05D004422 4.0e-07 57.8 77 49.4
Prupe.2G116700 Prunus persica HOM05D000086 ORTHO05D004422 4.0e-07 57.8 87 48.3
Lj7A551T53 Lonicera japonica HOM05D000086 ORTHO05D004422 5.2e-07 57.4 77 49.4
Sed0027435 Sechium edule HOM05D000086 ORTHO05D004422 5.2e-07 57.4 79 46.8
Cfa011026 Carpinus fangiana HOM05D000086 ORTHO05D004422 6.7e-07 57.0 91 45.1
Haze_02899 Corylus avellana HOM05D000086 ORTHO05D004422 6.7e-07 57.0 91 45.1
BcaC08g45028 Brassica carinata HOM05D000086 ORTHO05D004422 1.2e-06 56.2 77 48.1
BcaC08g45039 Brassica carinata HOM05D000086 ORTHO05D004422 1.2e-06 56.2 77 48.1
BolC6t37823H Brassica oleracea HOM05D000086 ORTHO05D004422 1.2e-06 56.2 77 48.1
Thhalv10006088m.g Eutrema salsugineum HOM05D000086 ORTHO05D004422 1.2e-06 56.2 77 48.1
Nitab4.5_0000735g0050 Nicotiana tabacum HOM05D000086 ORTHO05D004422 1.2e-06 56.2 82 43.9
Sp5g03000 Schrenkiella parvula HOM05D000086 ORTHO05D004422 1.2e-06 56.2 77 48.1
MELO3C006269.2 Cucumis melo HOM05D000086 ORTHO05D004422 1.5e-06 55.8 78 46.2
Gohir.A12G099100 Gossypium hirsutum HOM05D000086 ORTHO05D004422 1.5e-06 55.8 78 47.4
QL02p075861 Quercus lobata HOM05D000086 ORTHO05D004422 1.5e-06 55.8 83 43.4
QL04p026273 Quercus lobata HOM05D000086 ORTHO05D004422 1.5e-06 55.8 83 43.4
C06p26580 Brassica napus HOM05D000086 ORTHO05D004422 2.0e-06 55.5 79 46.8
CSS0025082 Camellia sinensis var. sinensis HOM05D000086 ORTHO05D004422 2.0e-06 55.5 77 41.6
CSS0048631 Camellia sinensis var. sinensis HOM05D000086 ORTHO05D004422 2.0e-06 55.5 77 41.6
CiPaw.14G017100 Carya illinoinensis HOM05D000086 ORTHO05D004422 2.0e-06 55.5 77 48.1
CsaV3_3G010450 Cucumis sativus L. HOM05D000086 ORTHO05D004422 2.0e-06 55.5 78 46.2
Gohir.A08G056200 Gossypium hirsutum HOM05D000086 ORTHO05D004422 2.0e-06 55.5 80 46.2
CANSAT25G2728 Cannabis sativa HOM05D000086 ORTHO05D004422 2.6e-06 55.1 78 43.6
ClCG00G002490 Citrullus lanatus HOM05D000086 ORTHO05D004422 2.6e-06 55.1 77 46.8
TWI59G0209 Tripterygium wilfordii HOM05D000086 ORTHO05D004422 2.6e-06 55.1 87 46.0
Hma1.2p1_0173F.1_g076500 Hydrangea macrophylla HOM05D000086 ORTHO05D004422 3.3e-06 54.7 79 44.3
Nitab4.5_0007434g0010 Nicotiana tabacum HOM05D000086 ORTHO05D004422 3.3e-06 54.7 84 44.0
Cpa.g.sc52.73 Carica papaya HOM05D000086 ORTHO05D004422 4.4e-06 54.3 78 47.4
Lj9A550G67 Lonicera japonica HOM05D000086 ORTHO05D004422 4.4e-06 54.3 82 45.1
unitig_750.g28407 Utricularia gibba HOM05D000086 ORTHO05D004422 4.4e-06 54.3 97 41.2
Actinidia12626 Actinidia chinensis HOM05D000086 ORTHO05D004422 5.7e-06 53.9 73 49.3
BcaB02g07427 Brassica carinata HOM05D000086 ORTHO05D004422 5.7e-06 53.9 77 45.5
Sopen01g035480 Solanum pennellii HOM05D000086 ORTHO05D004422 5.7e-06 53.9 85 42.4
vmacro13531 Vaccinium macrocarpon HOM05D000086 ORTHO05D004422 5.7e-06 53.9 84 38.1
Atru.chr5.46 Acer truncatum HOM05D000086 ORTHO05D004422 7.5e-06 53.5 79 44.3
Atru.chr5.77 Acer truncatum HOM05D000086 ORTHO05D004422 7.5e-06 53.5 79 44.3
A07p25010 Brassica napus HOM05D000086 ORTHO05D004422 7.5e-06 53.5 77 45.5
BraA07t30141Z Brassica rapa HOM05D000086 ORTHO05D004422 7.5e-06 53.5 77 45.5
Gorai.008G111300 Gossypium raimondii HOM05D000086 ORTHO05D004422 7.5e-06 53.5 78 46.2
Peaxi162Scf00103g00144 Petunia axillaris HOM05D000086 ORTHO05D004422 7.5e-06 53.5 89 44.9
SHI13653 Sapria himalayana HOM05D000086 ORTHO05D004422 7.5e-06 53.5 75 46.7
PGSC0003DMG400001719 Solanum tuberosum HOM05D000086 ORTHO05D004422 7.5e-06 53.5 85 42.4
Duzib268G1824 Durio zibethinus HOM05D000086 ORTHO05D004422 9.7e-06 53.1 79 46.8
Nitab4.5_0005064g0030 Nicotiana tabacum HOM05D000086 ORTHO05D004422 9.7e-06 53.1 85 42.4


User provided reference genes

Program Settings