Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN04G1176 Fragaria x ananassa HOM05D001656 ORTHO05D005043 2.5e-200 701.8 338 100.0
FvH4_5g33550 Fragaria vesca HOM05D001656 ORTHO05D005043 7.4e-192 673.7 338 96.4
RcHm_v2.0_Chr7g0232371 Rosa chinensis HOM05D001656 ORTHO05D005043 4.2e-179 631.3 338 89.1
FAN18G2419 Fragaria x ananassa HOM05D001656 ORTHO05D003489 1.1e-158 563.5 338 84.6
MD15G1398600 Malus domestica HOM05D001656 ORTHO05D005043 1.8e-150 536.2 335 75.8
RcHm_v2.0_Chr7g0232401 Rosa chinensis HOM05D001656 ORTHO05D005043 1.0e-148 530.4 340 76.2
FAN08G0520 Fragaria x ananassa HOM05D001656 ORTHO05D003489 1.3e-148 530.0 338 80.5
Prupe.1G542700 Prunus persica HOM05D001656 ORTHO05D005043 3.2e-147 525.4 335 74.6
FvH4_5g33570 Fragaria vesca HOM05D001656 ORTHO05D005043 2.3e-145 519.2 336 75.3
FAN08G2664 Fragaria x ananassa HOM05D001656 ORTHO05D005043 3.1e-142 508.8 340 74.1
Actinidia19273 Actinidia chinensis HOM05D001656 ORTHO05D005043 9.1e-142 507.3 336 73.8
vmacro21383 Vaccinium macrocarpon HOM05D001656 ORTHO05D005043 9.1e-142 507.3 336 73.8
Actinidia10250 Actinidia chinensis HOM05D001656 ORTHO05D005043 2.0e-141 506.1 336 73.8
MD08G1210700 Malus domestica HOM05D001656 ORTHO05D005043 3.8e-140 501.9 335 72.2
RcHm_v2.0_Chr7g0232391 Rosa chinensis HOM05D001656 ORTHO05D005043 3.8e-140 501.9 340 72.4
Cpa.g.sc160.9 Carica papaya HOM05D001656 ORTHO05D005043 8.5e-140 500.7 336 72.0
Gohir.D05G217900 Gossypium hirsutum HOM05D001656 ORTHO05D005043 8.5e-140 500.7 339 71.1
Gorai.009G224700 Gossypium raimondii HOM05D001656 ORTHO05D005043 8.5e-140 500.7 339 71.1
QL12p040536 Quercus lobata HOM05D001656 ORTHO05D005043 1.1e-139 500.4 336 72.9
Duzib093G1672 Durio zibethinus HOM05D001656 ORTHO05D005043 1.5e-139 500.0 336 72.3
TAR381G0234 Trochodendron aralioides HOM05D001656 ORTHO05D005043 2.5e-139 499.2 336 72.0
GSVIVG01009259001 Vitis vinifera HOM05D001656 ORTHO05D005043 2.5e-139 499.2 336 72.3
Duzib041G0753 Durio zibethinus HOM05D001656 ORTHO05D005043 3.2e-139 498.8 339 72.0
Gohir.A05G214600 Gossypium hirsutum HOM05D001656 ORTHO05D005043 4.2e-139 498.4 339 70.8
Lsat_1_v5_gn_2_121140 Lactuca sativa HOM05D001656 ORTHO05D005043 5.5e-139 498.0 338 72.2
Ciclev10000739m.g Citrus clementina HOM05D001656 ORTHO05D005043 2.7e-138 495.7 336 71.7
FAN18G4580 Fragaria x ananassa HOM05D001656 ORTHO05D005043 8.0e-138 494.2 357 70.0
Manes.18G053600 Manihot esculenta HOM05D001656 ORTHO05D005043 1.4e-137 493.4 336 71.1
CANSAT25G3831 Cannabis sativa HOM05D001656 ORTHO05D005043 1.8e-137 493.0 339 71.7
Rhsim06G0067500 Rhododendron simsii HOM05D001656 ORTHO05D005043 1.8e-137 493.0 336 72.3
Thecc.08G080000 Theobroma cacao HOM05D001656 ORTHO05D005043 2.3e-137 492.7 336 71.4
Lalb_Chr11g0064681 Lupinus albus HOM05D001656 ORTHO05D005043 5.2e-137 491.5 339 70.8
Potri.019G077600 Populus trichocarpa HOM05D001656 ORTHO05D005043 8.8e-137 490.7 336 70.5
Eucgr.F00471 Eucalyptus grandis HOM05D001656 ORTHO05D005043 1.5e-136 490.0 339 70.2
TWI56G0239 Tripterygium wilfordii HOM05D001656 ORTHO05D005043 2.6e-136 489.2 336 70.8
Peaxi162Scf01174g00119 Petunia axillaris HOM05D001656 ORTHO05D005043 7.5e-136 487.6 336 70.2
Hma1.2p1_1078F.1_g254805 Hydrangea macrophylla HOM05D001656 ORTHO05D005043 9.8e-136 487.3 337 71.2
CAN.G1801.4 Capsicum annuum HOM05D001656 ORTHO05D005043 1.3e-135 486.9 336 68.8
Manes.05G186400 Manihot esculenta HOM05D001656 ORTHO05D005043 1.3e-135 486.9 339 69.9
PSO447G0306 Papaver somniferum HOM05D001656 ORTHO05D005043 1.3e-135 486.9 336 69.0
Cfa020711 Carpinus fangiana HOM05D001656 ORTHO05D005043 2.2e-135 486.1 336 70.8
PGSC0003DMG400004938 Solanum tuberosum HOM05D001656 ORTHO05D005043 2.8e-135 485.7 336 68.8
CiPaw.15G153300 Carya illinoinensis HOM05D001656 ORTHO05D005043 3.7e-135 485.3 339 72.0
Haze_19016 Corylus avellana HOM05D001656 ORTHO05D005043 3.7e-135 485.3 336 71.4
Migut.C00423 Erythranthe guttata HOM05D001656 ORTHO05D005043 3.7e-135 485.3 336 71.1
Sabra19G0088700 Salix brachista HOM05D001656 ORTHO05D005043 4.8e-135 485.0 336 69.9
Sopen00g003720 Solanum pennellii HOM05D001656 ORTHO05D005043 1.1e-134 483.8 338 68.9
CsaV3_6G036230 Cucumis sativus L. HOM05D001656 ORTHO05D005043 1.8e-134 483.0 336 70.2
DCAR_020038 Daucus carota HOM05D001656 ORTHO05D005043 1.8e-134 483.0 339 70.5
Ah.11g038980 Amaranthus hybridus HOM05D001656 ORTHO05D005043 2.4e-134 482.6 336 69.0
Nitab4.5_0003791g0030 Nicotiana tabacum HOM05D001656 ORTHO05D005043 2.4e-134 482.6 336 69.3
Solyc04g077040.3 Solanum lycopersicum HOM05D001656 ORTHO05D005043 3.1e-134 482.3 336 68.5
Nitab4.5_0006011g0010 Nicotiana tabacum HOM05D001656 ORTHO05D005043 5.4e-134 481.5 352 67.3
PGR083G1861 Punica granatum HOM05D001656 ORTHO05D005043 5.4e-134 481.5 336 69.9
PSO210G2052 Papaver somniferum HOM05D001656 ORTHO05D005043 1.2e-133 480.3 335 68.7
Aqoxy5G02659 Aquilegia oxysepala HOM05D001656 ORTHO05D005043 2.0e-133 479.6 336 69.0
Sed0025136 Sechium edule HOM05D001656 ORTHO05D005043 2.0e-133 479.6 336 68.8
Glyma.04G088400 Glycine max HOM05D001656 ORTHO05D005043 4.5e-133 478.4 339 68.7
MBI16_g26737_MAGBIO Magnolia biondii HOM05D001656 ORTHO05D005043 5.9e-133 478.0 335 68.4
COL.COLO4_35356 Corchorus olitorius HOM05D001656 ORTHO05D005043 7.7e-133 477.6 344 68.9
SalBow7G3472 Salvia bowleyana HOM05D001656 ORTHO05D005043 7.7e-133 477.6 336 69.6
Cc10_g08000 Coffea canephora HOM05D001656 ORTHO05D005043 1.0e-132 477.2 336 69.6
Lj1g0025512 Lotus japonicus HOM05D001656 ORTHO05D005043 1.3e-132 476.9 336 69.3
Oeu035948.1 Olea europaea HOM05D001656 ORTHO05D005043 2.9e-132 475.7 336 69.3
arahy.Tifrunner.gnm1.ann1.AQ9I9J Arachis hypogaea HOM05D001656 ORTHO05D005043 6.5e-132 474.6 339 67.6
HanXRQChr02g0046991 Helianthus annuus HOM05D001656 ORTHO05D005043 6.5e-132 474.6 336 68.5
Lj4A79T57 Lonicera japonica HOM05D001656 ORTHO05D005043 6.5e-132 474.6 336 68.2
arahy.Tifrunner.gnm1.ann1.UN376R Arachis hypogaea HOM05D001656 ORTHO05D005043 8.5e-132 474.2 339 67.6
Phvul.009G114000 Phaseolus vulgaris HOM05D001656 ORTHO05D005043 8.5e-132 474.2 336 69.3
Lj4C747T6 Lonicera japonica HOM05D001656 ORTHO05D005043 1.1e-131 473.8 354 67.5
THA.LOC104799841 Tarenaya hassleriana HOM05D001656 ORTHO05D005043 1.9e-131 473.0 339 68.1
Os07g0640200 Oryza sativa ssp. japonica HOM05D001656 ORTHO05D005043 3.2e-131 472.2 340 67.4
Dinv22032 Davidia involucrata HOM05D001656 ORTHO05D005043 4.2e-131 471.9 306 74.8
TWI36G0349 Tripterygium wilfordii HOM05D001656 ORTHO05D005043 4.2e-131 471.9 337 69.4
MSTRG.915 Avicennia marina HOM05D001656 ORTHO05D005043 9.5e-131 470.7 336 68.2
SpUn0011_0010 Schrenkiella parvula HOM05D001656 ORTHO05D005043 9.5e-131 470.7 339 68.1
SpUn0057_0010 Schrenkiella parvula HOM05D001656 ORTHO05D005043 9.5e-131 470.7 339 68.1
SpUn0134_0020 Schrenkiella parvula HOM05D001656 ORTHO05D005043 9.5e-131 470.7 339 68.1
Medtr3g110710 Medicago truncatula HOM05D001656 ORTHO05D005043 3.6e-130 468.8 336 68.5
ECA247G3818 Erigeron canadensis HOM05D001656 ORTHO05D005043 8.0e-130 467.6 320 70.0
Sopen00g004570 Solanum pennellii HOM05D001656 ORTHO05D005043 1.4e-129 466.8 336 67.3
VMungo1309G0971 Vigna mungo HOM05D001656 ORTHO05D005043 1.4e-129 466.8 336 68.5
Atru.chr13.919 Acer truncatum HOM05D001656 ORTHO05D005043 8.8e-129 464.2 336 68.8
AL8G23490 Arabidopsis lyrata HOM05D001656 ORTHO05D005043 8.8e-129 464.2 339 67.6
CAN.G1801.5 Capsicum annuum HOM05D001656 ORTHO05D005043 8.8e-129 464.2 336 67.0
Ca_15555_v3 Cicer arietinum L. HOM05D001656 ORTHO05D005043 8.8e-129 464.2 336 67.9
TPR.G12406 Trifolium pratense HOM05D001656 ORTHO05D005043 1.2e-128 463.8 336 67.6
Carub.0008s0951 Capsella rubella HOM05D001656 ORTHO05D005043 2.0e-128 463.0 339 67.6
BcaC01g01862 Brassica carinata HOM05D001656 ORTHO05D005043 2.6e-128 462.6 339 67.0
AUR62035764 Chenopodium quinoa HOM05D001656 ORTHO05D005043 3.4e-128 462.2 336 67.6
BcaB01g00958 Brassica carinata HOM05D001656 ORTHO05D005043 4.4e-128 461.8 339 67.0
Thhalv10013140m.g Eutrema salsugineum HOM05D001656 ORTHO05D005043 4.4e-128 461.8 339 67.6
Solyc04g077030.3 Solanum lycopersicum HOM05D001656 ORTHO05D005043 4.4e-128 461.8 354 64.7
AT5G49650 Arabidopsis thaliana HOM05D001656 ORTHO05D005043 5.7e-128 461.5 339 67.0
AUR62034954 Chenopodium quinoa HOM05D001656 ORTHO05D005043 7.5e-128 461.1 336 67.3
Zm00001eb109880 Zea mays HOM05D001656 ORTHO05D005043 2.8e-127 459.1 341 65.7
BolC3t19406H Brassica oleracea HOM05D001656 ORTHO05D005043 4.9e-127 458.4 345 66.1
Nitab4.5_0010814g0010 Nicotiana tabacum HOM05D001656 ORTHO05D005043 2.4e-126 456.1 363 63.1
A06p20550 Brassica napus HOM05D001656 ORTHO05D005043 3.1e-126 455.7 345 65.8
C03p71250 Brassica napus HOM05D001656 ORTHO05D005043 1.6e-125 453.4 357 63.9
ATR0315G023 Amborella trichopoda HOM05D001656 ORTHO05D005043 2.0e-125 453.0 334 66.2
Hund05240 Selenicereus undatus HOM05D001656 ORTHO05D005043 2.0e-125 453.0 336 66.4
ClCG08G008920 Citrullus lanatus HOM05D001656 ORTHO05D005043 5.9e-125 451.4 336 67.6
Nn6g32050 Nelumbo nucifera HOM05D001656 ORTHO05D005043 5.9e-125 451.4 336 66.7
SGA_v2.0_scaffold14G07067 Striga asiatica HOM05D001656 ORTHO05D005043 1.0e-124 450.7 351 64.7
EL10Ac1g02312 Beta vulgaris HOM05D001656 ORTHO05D005043 2.3e-124 449.5 336 66.4
Cc10_g08010 Coffea canephora HOM05D001656 ORTHO05D005043 6.6e-124 448.0 343 66.5
DCAR_009544 Daucus carota HOM05D001656 ORTHO05D005043 2.5e-123 446.0 336 66.1
ECA232G0787 Erigeron canadensis HOM05D001656 ORTHO05D005043 2.5e-123 446.0 335 66.3
Aa31LG3G8940 Aethionema arabicum HOM05D001656 ORTHO05D005043 8.0e-122 441.0 352 63.9
MSTRG.914 Avicennia marina HOM05D001656 ORTHO05D005043 1.2e-120 437.2 337 64.4
CDE02G2348 Ceratophyllum demersum HOM05D001656 ORTHO05D005043 2.6e-120 436.0 336 64.9
Oeu046408.1 Olea europaea HOM05D001656 ORTHO05D005043 1.7e-119 433.3 307 69.1
Os12g0633000 Oryza sativa ssp. japonica HOM05D001656 ORTHO05D005043 2.2e-119 433.0 340 62.4
SEGI_21864 Sequoiadendron giganteum HOM05D001656 ORTHO05D005043 7.0e-118 427.9 337 61.7
Hma1.2p1_1281F.1_g272610 Hydrangea macrophylla HOM05D001656 ORTHO05D005043 1.2e-117 427.2 290 71.4
CARHR293240 Cardamine hirsuta HOM05D001656 ORTHO05D005043 4.3e-115 418.7 323 63.5
Hund05241 Selenicereus undatus HOM05D001656 ORTHO05D005043 6.2e-114 414.8 379 57.8
Pp3c13_15890 Physcomitrium patens HOM05D001656 ORTHO05D005043 2.6e-112 409.5 332 59.3
Nitab4.5_0003791g0040 Nicotiana tabacum HOM05D001656 ORTHO05D005043 1.9e-110 403.3 379 57.0
unitig_736.g22951 Utricularia gibba HOM05D001656 ORTHO05D005043 7.8e-109 397.9 321 60.7
MELO3C019781.2 Cucumis melo HOM05D001656 ORTHO05D005043 1.1e-107 394.0 341 61.0
EL10Ac1g02313 Beta vulgaris HOM05D001656 ORTHO05D005043 1.7e-103 380.2 336 58.6
AagrBONN_evm.TU.Sc2ySwM_228.1076 Anthoceros agrestis HOM05D001656 ORTHO05D005043 6.0e-101 371.7 330 56.7
Pp3c4_10480 Physcomitrium patens HOM05D001656 ORTHO05D005043 1.6e-98 363.6 334 52.7
Pp3c4_10497 Physcomitrium patens HOM05D001656 ORTHO05D005043 1.6e-98 363.6 334 52.7
HPP92_028451 Vanilla planifolia HOM05D001656 ORTHO05D005043 5.2e-97 358.6 273 65.6
Oeu035949.1 Olea europaea HOM05D001656 ORTHO05D005043 1.7e-95 353.6 269 66.9
Nn5g30719 Nelumbo nucifera HOM05D001656 ORTHO05D005043 1.3e-92 344.0 222 74.3
Mapoly0152s0012 Marchantia polymorpha HOM05D001656 ORTHO05D005043 2.5e-91 339.7 333 51.4
SMO339G0045 Selaginella moellendorffii HOM05D001656 ORTHO05D005043 1.4e-89 334.0 295 56.3
Dinv44906 Davidia involucrata HOM05D001656 ORTHO05D005043 1.0e-76 291.2 170 80.6
Sc26g0004310 Simmondsia chinensis HOM05D001656 ORTHO05D005043 2.8e-74 283.1 170 78.8
Psat5g091440 Pisum sativum HOM05D001656 ORTHO05D005043 9.3e-70 268.1 170 72.9
Sc08g0003410 Simmondsia chinensis HOM05D001656 ORTHO05D005043 4.3e-67 259.2 170 75.3
MBI16_g05037_MAGBIO Magnolia biondii HOM05D001656 ORTHO05D005043 2.6e-64 250.0 215 61.9
Glyma.06G090401 Glycine max HOM05D001656 ORTHO05D005043 1.0e-55 221.5 145 71.0
Oeu034830.1 Olea europaea HOM05D001656 ORTHO05D005043 1.8e-33 147.5 87 79.3
AUR62034953 Chenopodium quinoa HOM05D001656 ORTHO05D005043 5.0e-23 112.8 71 76.1
Gohir.D13G037000 Gossypium hirsutum HOM05D001656 ORTHO05D005043 1.4e-17 94.7 58 75.9
Gorai.013G041400 Gossypium raimondii HOM05D001656 ORTHO05D005043 3.1e-17 93.6 58 74.1
Gohir.D06G145701 Gossypium hirsutum HOM05D001656 ORTHO05D005043 5.4e-17 92.8 56 78.6
Cc01_g04230 Coffea canephora HOM05D001656 ORTHO05D005043 1.6e-16 91.3 62 69.4
Cc04_g15120 Coffea canephora HOM05D001656 ORTHO05D005043 2.0e-16 90.9 62 69.4
Gorai.010G169800 Gossypium raimondii HOM05D001656 ORTHO05D005043 2.7e-16 90.5 57 73.7
Cc11_g07750 Coffea canephora HOM05D001656 ORTHO05D005043 1.3e-15 88.2 62 67.7
Cc02_g27750 Coffea canephora HOM05D001656 ORTHO05D005043 5.0e-15 86.3 62 66.1
HanXRQChr08g0210401 Helianthus annuus HOM05D001656 ORTHO05D005043 2.5e-14 84.0 55 67.3
RcHm_v2.0_Chr2g0168121 Rosa chinensis HOM05D004344 ORTHO05D021344 8.0e-13 79.0 57 59.6
ECA247G1681 Erigeron canadensis HOM05D000257 ORTHO05D008527 1.4e-12 78.2 59 59.3
Cre07.g321100 Chlamydomonas reinhardtii HOM05D001656 ORTHO05D014814 4.0e-12 76.6 276 28.3
Cc08_g09760 Coffea canephora HOM05D001656 ORTHO05D005043 6.8e-12 75.9 51 70.6
Gorai.010G172000 Gossypium raimondii HOM05D001656 ORTHO05D005043 1.7e-10 71.2 47 72.3
Gohir.D08G147150 Gossypium hirsutum HOM05D001656 ORTHO05D005043 2.2e-10 70.9 44 77.3
Gorai.004G152700 Gossypium raimondii HOM05D001656 ORTHO05D005043 2.2e-10 70.9 44 77.3
CBR_g50937 Chara braunii HOM05D001656 ORTHO05D005043 4.9e-10 69.7 54 57.4
PRCOL_00006907 Prasinoderma coloniale HOM05D013921 ORTHO05D014814 2.4e-09 67.4 236 26.7
CBR_g40751 Chara braunii HOM05D001656 ORTHO05D005043 5.0e-07 59.7 47 61.7
FvH4_5g33600 Fragaria vesca HOM05D001656 ORTHO05D005043 8.6e-07 58.9 49 57.1
FAN18G3130 Fragaria x ananassa HOM05D001656 ORTHO05D005043 8.6e-07 58.9 49 57.1
MCO10G102 Micromonas commoda HOM05D001656 ORTHO05D014814 1.5e-06 58.2 216 27.8


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