Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN04G1106 Fragaria x ananassa HOM05D009987 ORTHO05D010465 1.0e-55 219.9 116 100.0
FAN08G0761 Fragaria x ananassa HOM05D009987 ORTHO05D010465 1.4e-54 216.1 116 98.3
FAN13G0968 Fragaria x ananassa HOM05D009987 ORTHO05D010465 6.9e-41 170.6 87 98.9
Haze_07327 Corylus avellana HOM05D009987 ORTHO05D010465 7.2e-22 107.5 97 67.0
Nitab4.5_0006000g0050 Nicotiana tabacum HOM05D009987 ORTHO05D010465 7.2e-22 107.5 94 66.0
Nitab4.5_0001128g0180 Nicotiana tabacum HOM05D009987 ORTHO05D010465 9.4e-22 107.1 93 66.7
CSS0008541 Camellia sinensis var. sinensis HOM05D009987 ORTHO05D010465 6.1e-21 104.4 94 64.9
TAR622G1125 Trochodendron aralioides HOM05D009987 ORTHO05D010465 2.9e-15 85.5 96 58.3
FAN09G0586 Fragaria x ananassa HOM05D009987 ORTHO05D010465 1.1e-14 83.6 64 70.3
Cfa007553 Carpinus fangiana HOM05D009987 ORTHO05D010465 9.4e-14 80.5 104 51.0
CSS0049432 Camellia sinensis var. sinensis HOM05D009987 ORTHO05D010465 1.6e-13 79.7 104 51.9
ClCG10G015020 Citrullus lanatus HOM05D009987 ORTHO05D010465 3.0e-12 75.5 94 56.4
Sabra17G0073600 Salix brachista HOM05D009987 ORTHO05D010465 6.8e-12 74.3 76 57.9
vmacro18191 Vaccinium macrocarpon HOM05D009987 ORTHO05D010465 1.5e-11 73.2 64 64.1
arahy.Tifrunner.gnm1.ann1.X9WA5F Arachis hypogaea HOM05D009987 ORTHO05D010465 5.7e-11 71.2 104 48.1
arahy.Tifrunner.gnm1.ann1.VDH4YT Arachis hypogaea HOM05D009987 ORTHO05D010465 7.5e-11 70.9 97 51.5
Oeu011862.1 Olea europaea HOM05D009987 ORTHO05D010465 7.5e-11 70.9 95 53.7
Atru.chr8.160 Acer truncatum HOM05D009987 ORTHO05D010465 1.3e-10 70.1 95 51.6
Atru.chr1.1896 Acer truncatum HOM05D010327 ORTHO05D010465 2.4e-09 65.9 57 61.4
SGA_v2.0_scaffold42G16091 Striga asiatica HOM05D010327 ORTHO05D010465 3.5e-08 62.0 90 50.0
AUR62008417 Chenopodium quinoa HOM05D024303 ORTHO05D010465 1.7e-07 59.7 98 49.0
Ah.11g048390 Amaranthus hybridus HOM05D024303 ORTHO05D010465 5.0e-07 58.2 84 52.4
Rhsim04G0108900 Rhododendron simsii HOM05D000002 ORTHO05D000001 5.0e-07 58.2 61 52.5
FAN23G1235 Fragaria x ananassa HOM05D010327 ORTHO05D010465 8.6e-07 57.4 58 58.6
CDE08G0721 Ceratophyllum demersum HOM05D009987 ORTHO05D010465 1.1e-06 57.0 67 47.8
A02p02970 Brassica napus HOM05D009987 ORTHO05D010465 1.9e-06 56.2 94 45.7
FAN19G0505 Fragaria x ananassa HOM05D010327 ORTHO05D010465 2.5e-06 55.8 58 56.9
QL93p0100_0410 Quercus lobata HOM05D010327 ORTHO05D010465 3.3e-06 55.5 47 68.1
TPR.G21388 Trifolium pratense HOM05D009987 ORTHO05D010465 3.3e-06 55.5 66 47.0
QL02p058001 Quercus lobata HOM05D010327 ORTHO05D010465 4.2e-06 55.1 45 68.9
ATR0068G116 Amborella trichopoda HOM05D009987 ORTHO05D010465 7.2e-06 54.3 96 45.8
Rhsim13G0216800 Rhododendron simsii HOM05D010327 ORTHO05D010465 9.5e-06 53.9 61 50.8


User provided reference genes

Program Settings