Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN04G1026 Fragaria x ananassa HOM05D000239 ORTHO05D203308 4.5e-52 207.6 103 100.0
FAN13G2773 Fragaria x ananassa HOM05D000239 ORTHO05D000484 3.5e-20 101.7 68 80.9
FAN04G0539 Fragaria x ananassa HOM05D000239 ORTHO05D000484 6.0e-20 100.9 68 79.4
FAN08G2427 Fragaria x ananassa HOM05D000239 ORTHO05D000484 1.3e-19 99.8 68 79.4
FAN18G4405 Fragaria x ananassa HOM05D000239 ORTHO05D000484 1.3e-19 99.8 68 79.4
FvH4_5g34560 Fragaria vesca HOM05D000239 ORTHO05D000484 8.7e-19 97.1 68 77.9
FAN20G2961 Fragaria x ananassa HOM05D000007 ORTHO05D000521 3.3e-18 95.1 68 79.4
RcHm_v2.0_Chr7g0235241 Rosa chinensis HOM05D000239 ORTHO05D000484 1.4e-16 89.7 68 76.5
CsaV3_3G048040 Cucumis sativus L. HOM05D000239 ORTHO05D000484 1.5e-10 69.7 87 52.9
Thecc.08G072500 Theobroma cacao HOM05D000239 ORTHO05D000484 2.5e-10 68.9 67 59.7
MELO3C003518.2 Cucumis melo HOM05D000239 ORTHO05D000484 3.3e-10 68.6 87 51.7
Gorai.010G033900 Gossypium raimondii HOM05D000239 ORTHO05D000484 1.3e-09 66.6 61 60.7
CANSAT25G1798 Cannabis sativa HOM05D000239 ORTHO05D000484 3.6e-09 65.1 59 66.1
TWI12G0368 Tripterygium wilfordii HOM05D000239 ORTHO05D000484 6.2e-09 64.3 62 59.7
ClCG11G014630 Citrullus lanatus HOM05D000239 ORTHO05D000484 8.1e-09 63.9 87 49.4
Duzib093G1551 Durio zibethinus HOM05D000239 ORTHO05D000484 1.1e-08 63.5 71 53.5
FAN21G0173 Fragaria x ananassa HOM05D000066 ORTHO05D001993 4.0e-08 61.6 44 77.3
Gohir.A06G031600 Gossypium hirsutum HOM05D000239 ORTHO05D000484 6.9e-08 60.8 61 57.4
PGR042G2622 Punica granatum HOM05D000239 ORTHO05D000484 1.2e-07 60.1 67 58.2
MD08G1200300 Malus domestica HOM05D000239 ORTHO05D000484 1.5e-07 59.7 84 48.8
TWI36G0412 Tripterygium wilfordii HOM05D000239 ORTHO05D000484 3.4e-07 58.5 62 59.7
Sed0018934 Sechium edule HOM05D000239 ORTHO05D000484 5.8e-07 57.8 62 61.3
Prupe.1G533900 Prunus persica HOM05D000239 ORTHO05D000484 9.9e-07 57.0 76 50.0
MD15G1387500 Malus domestica HOM05D000239 ORTHO05D000484 2.2e-06 55.8 86 46.5
Cpa.g.sc21.30 Carica papaya HOM05D000239 ORTHO05D000484 2.9e-06 55.5 66 56.1
Gohir.A05G218900 Gossypium hirsutum HOM05D000239 ORTHO05D000484 2.9e-06 55.5 63 50.8
Haze_22474 Corylus avellana HOM05D000239 ORTHO05D000484 3.8e-06 55.1 64 57.8
Potri.005G153100 Populus trichocarpa HOM05D000239 ORTHO05D000484 4.9e-06 54.7 57 56.1
Eucgr.F00429 Eucalyptus grandis HOM05D000239 ORTHO05D000484 6.4e-06 54.3 66 56.1
CiPaw.07G164100 Carya illinoinensis HOM05D000239 ORTHO05D000484 8.4e-06 53.9 75 53.3
Manes.05G189700 Manihot esculenta HOM05D000239 ORTHO05D000484 8.4e-06 53.9 62 53.2


User provided reference genes

Program Settings