Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN04G1018 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.3e-44 181.8 90 100.0
FAN08G0212 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.2e-44 180.6 89 98.9
FAN13G3008 Fragaria x ananassa HOM05D002813 ORTHO05D003203 9.8e-43 176.4 89 96.6
FAN18G3569 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.9e-38 162.2 89 88.8
FAN18G4233 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.9e-38 162.2 89 88.8
FAN18G4231 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.6e-21 104.8 75 70.7
FvH4_7g07300 Fragaria vesca HOM05D002813 ORTHO05D003203 1.8e-20 102.4 84 59.5
FAN21G0510 Fragaria x ananassa HOM05D002813 ORTHO05D003203 6.8e-20 100.5 92 58.7
FAN01G2630 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.2e-19 99.8 84 57.1
FvH4_3g11250 Fragaria vesca HOM05D002813 ORTHO05D003203 3.8e-18 94.7 92 56.5
FAN27G1742 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.9e-18 94.4 91 57.1
FAN15G2356 Fragaria x ananassa HOM05D002813 ORTHO05D000003 6.4e-18 94.0 91 57.1
FvH4_2g37241 Fragaria vesca HOM05D002813 ORTHO05D003203 8.4e-18 93.6 91 56.0
FAN25G3196 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.5e-16 88.2 91 52.7
FAN06G2359 Fragaria x ananassa HOM05D002813 ORTHO05D003203 7.8e-16 87.0 70 58.6
FvH4_5g09361 Fragaria vesca HOM05D002813 ORTHO05D003203 1.7e-15 85.9 69 59.4
FAN11G2625 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.9e-15 84.7 87 55.2
FAN13G0724 Fragaria x ananassa HOM05D001362 ORTHO05D001310 3.3e-14 81.6 68 55.9
FAN20G1057 Fragaria x ananassa HOM05D002813 ORTHO05D000003 7.3e-14 80.5 77 55.8
FAN18G3812 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.6e-13 78.2 82 54.9
FAN18G2715 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.8e-12 75.9 58 65.5
FAN14G5169 Fragaria x ananassa HOM05D002813 ORTHO05D003203 6.9e-12 73.9 77 48.1
FAN04G1781 Fragaria x ananassa HOM05D002813 ORTHO05D003203 9.0e-12 73.6 81 48.1
FvH4_5g12240 Fragaria vesca HOM05D002813 ORTHO05D003203 1.2e-11 73.2 40 87.5
FvH4_7g29850 Fragaria vesca HOM05D002813 ORTHO05D003203 1.2e-11 73.2 74 50.0
FAN06G0128 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.2e-11 73.2 74 50.0
FAN06G0370 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.2e-11 73.2 74 50.0
FAN25G2464 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.2e-11 73.2 73 50.7
RcHm_v2.0_Chr6g0307031 Rosa chinensis HOM05D002813 ORTHO05D003203 1.2e-11 73.2 72 55.6
FAN10G2587 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.6e-11 72.0 65 55.4
FAN10G3741 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.6e-11 72.0 65 55.4
FvH4_5g12210 Fragaria vesca HOM05D002813 ORTHO05D003203 7.6e-11 70.5 83 45.8
FAN01G0062 Fragaria x ananassa HOM05D002813 ORTHO05D003203 9.9e-11 70.1 65 53.8
Prupe.1G448200 Prunus persica HOM05D002813 ORTHO05D003203 9.9e-11 70.1 63 61.9
FvH4_5g12180 Fragaria vesca HOM05D002813 ORTHO05D003203 1.3e-10 69.7 75 45.3
FAN04G3192 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.7e-10 69.3 83 45.8
FAN18G0957 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.7e-10 69.3 81 45.7
FvH4_5g12200 Fragaria vesca HOM05D002813 ORTHO05D003203 2.2e-10 68.9 81 44.4
FAN25G2065 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.2e-10 68.9 59 59.3
FAN06G1567 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.9e-10 68.6 66 54.5
FAN06G4596 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.9e-10 68.6 65 53.8
MD15G1093400 Malus domestica HOM05D002813 ORTHO05D003203 4.9e-10 67.8 63 57.1
FAN03G2769 Fragaria x ananassa HOM05D002378 ORTHO05D002936 6.4e-10 67.4 76 48.7
FAN15G1644 Fragaria x ananassa HOM05D002378 ORTHO05D002936 6.4e-10 67.4 76 48.7
FAN21G3192 Fragaria x ananassa HOM05D002378 ORTHO05D002936 6.4e-10 67.4 76 48.7
FAN24G2051 Fragaria x ananassa HOM05D002378 ORTHO05D002936 6.4e-10 67.4 76 48.7
FAN18G2625 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.1e-09 66.6 76 42.1
RcHm_v2.0_Chr5g0073471 Rosa chinensis HOM05D002813 ORTHO05D003203 1.4e-09 66.2 63 52.4
TAR626G1934 Trochodendron aralioides HOM05D002813 ORTHO05D003203 3.2e-09 65.1 61 57.4
FAN18G4406 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.2e-09 64.7 65 47.7
FAN25G0875 Fragaria x ananassa HOM05D002378 ORTHO05D005974 5.4e-09 64.3 73 49.3
FAN27G0414 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.4e-09 64.3 65 52.3
FAN04G1334 Fragaria x ananassa HOM05D002813 ORTHO05D003203 7.1e-09 63.9 65 49.2
RcHm_v2.0_Chr6g0307021 Rosa chinensis HOM05D002813 ORTHO05D003203 7.1e-09 63.9 65 52.3
FvH4_2g34990 Fragaria vesca HOM05D002813 ORTHO05D003203 9.3e-09 63.5 65 52.3
FAN15G3400 Fragaria x ananassa HOM05D002813 ORTHO05D003203 9.3e-09 63.5 65 52.3
FAN20G0435 Fragaria x ananassa HOM05D002813 ORTHO05D003203 9.3e-09 63.5 65 52.3
FAN17G1816 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.2e-08 63.2 74 48.6
FAN25G1955 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.6e-08 61.2 69 46.4
RcHm_v2.0_Chr7g0185401 Rosa chinensis HOM05D002813 ORTHO05D003203 4.6e-08 61.2 69 46.4
COL.COLO4_20970 Corchorus olitorius HOM05D006532 ORTHO05D008570 6.0e-08 60.8 66 51.5
FvH4_6g41671 Fragaria vesca HOM05D002813 ORTHO05D003203 7.8e-08 60.5 65 49.2
FvH4_2g32530 Fragaria vesca HOM05D002813 ORTHO05D003203 1.0e-07 60.1 65 50.8
FAN02G4465 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.0e-07 60.1 65 49.2
FAN24G2117 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.0e-07 60.1 65 50.8
FAN27G1770 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.0e-07 60.1 83 43.4
Nn2g11622 Nelumbo nucifera HOM05D002813 ORTHO05D003203 1.0e-07 60.1 62 51.6
SGA_v2.0_scaffold103G30003 Striga asiatica HOM05D002813 ORTHO05D003203 1.3e-07 59.7 60 56.7
FAN24G2983 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.7e-07 59.3 63 50.8
Gohir.A05G046700 Gossypium hirsutum HOM05D002813 ORTHO05D003203 1.7e-07 59.3 64 53.1
FvH4_2g32610 Fragaria vesca HOM05D002813 ORTHO05D003203 2.3e-07 58.9 63 50.8
FAN06G5037 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.3e-07 58.9 64 53.1
FAN11G0908 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.3e-07 58.9 69 44.9
FAN20G2689 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.3e-07 58.9 63 49.2
Gohir.D05G048500 Gossypium hirsutum HOM05D002813 ORTHO05D003203 2.3e-07 58.9 62 53.2
Gorai.009G049800 Gossypium raimondii HOM05D002813 ORTHO05D003203 2.3e-07 58.9 62 53.2
FvH4_5g12160 Fragaria vesca HOM05D002813 ORTHO05D003203 3.0e-07 58.5 69 43.5
FAN08G1174 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.0e-07 58.5 69 43.5
FAN13G2791 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.0e-07 58.5 69 43.5
QL12p041348 Quercus lobata HOM05D002813 ORTHO05D003203 3.0e-07 58.5 59 54.2
FvH4_3g40700 Fragaria vesca HOM05D002813 ORTHO05D003203 3.9e-07 58.2 69 44.9
FAN04G2105 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.9e-07 58.2 69 43.5
FAN03G2494 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.1e-07 57.8 63 54.0
FAN15G0916 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.1e-07 57.8 64 46.9
RcHm_v2.0_Chr2g0157391 Rosa chinensis HOM05D002813 ORTHO05D003203 5.1e-07 57.8 65 47.7
RcHm_v2.0_Chr6g0307011 Rosa chinensis HOM05D002813 ORTHO05D003203 5.1e-07 57.8 61 49.2
GSVIVG01035624001 Vitis vinifera HOM05D002813 ORTHO05D003203 5.1e-07 57.8 61 50.8
Duzib168G2404 Durio zibethinus HOM05D002813 ORTHO05D003203 6.6e-07 57.4 66 48.5
FAN06G2895 Fragaria x ananassa HOM05D000201 ORTHO05D007118 6.6e-07 57.4 66 47.0
Sc23g0005220 Simmondsia chinensis HOM05D002813 ORTHO05D003203 6.6e-07 57.4 62 53.2
Eucgr.C02935 Eucalyptus grandis HOM05D002813 ORTHO05D003203 8.7e-07 57.0 63 50.8
FvH4_5g19260 Fragaria vesca HOM05D002813 ORTHO05D003203 8.7e-07 57.0 73 43.8
FAN06G4693 Fragaria x ananassa HOM05D000201 ORTHO05D007118 8.7e-07 57.0 52 53.8
FAN16G0815 Fragaria x ananassa HOM05D002813 ORTHO05D003203 8.7e-07 57.0 69 43.5
FAN18G2037 Fragaria x ananassa HOM05D002813 ORTHO05D003203 8.7e-07 57.0 73 43.8
FAN27G1144 Fragaria x ananassa HOM05D002813 ORTHO05D003203 8.7e-07 57.0 64 45.3
Atru.chr7.2088 Acer truncatum HOM05D002813 ORTHO05D003203 1.1e-06 56.6 61 49.2
Ciclev10010367m.g Citrus clementina HOM05D002813 ORTHO05D003203 1.1e-06 56.6 61 50.8
FvH4_2g32590 Fragaria vesca HOM05D002813 ORTHO05D003203 1.1e-06 56.6 78 39.7
Nitab4.5_0028416g0010 Nicotiana tabacum HOM05D002813 ORTHO05D003203 1.1e-06 56.6 61 47.5
FvH4_2g32520 Fragaria vesca HOM05D002813 ORTHO05D003203 1.5e-06 56.2 63 47.6
FvH4_2g32540 Fragaria vesca HOM05D002813 ORTHO05D003203 1.9e-06 55.8 65 44.6
FAN24G1750 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.9e-06 55.8 65 44.6
CiPaw.07G204200 Carya illinoinensis HOM05D002813 ORTHO05D003203 2.5e-06 55.5 61 52.5
RcHm_v2.0_Chr6g0306251 Rosa chinensis HOM05D002813 ORTHO05D003203 2.5e-06 55.5 64 48.4
FvH4_2g32630 Fragaria vesca HOM05D002813 ORTHO05D003203 3.3e-06 55.1 63 46.0
FvH4_2g35000 Fragaria vesca HOM05D002813 ORTHO05D003203 3.3e-06 55.1 64 45.3
FAN10G3663 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.3e-06 55.1 64 48.4
FAN13G1093 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.3e-06 55.1 65 47.7
FAN24G0821 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.3e-06 55.1 77 39.0
FAN15G1653 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.3e-06 54.7 72 44.4
FAN17G0649 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.3e-06 54.7 74 35.1
FAN20G2873 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.3e-06 54.7 72 44.4
FAN27G2509 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.3e-06 54.7 72 44.4
FAN20G1781 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.6e-06 54.3 65 44.6
FAN26G1940 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.6e-06 54.3 63 46.0
FAN28G0350 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.6e-06 54.3 65 44.6
QL12p041358 Quercus lobata HOM05D002813 ORTHO05D003203 5.6e-06 54.3 63 49.2
Solyc08g066630.2 Solanum lycopersicum HOM05D002813 ORTHO05D003203 5.6e-06 54.3 63 44.4
Sopen08g020490 Solanum pennellii HOM05D002813 ORTHO05D003203 5.6e-06 54.3 63 44.4
PGSC0003DMG400002228 Solanum tuberosum HOM05D002813 ORTHO05D003203 5.6e-06 54.3 63 42.9
Thecc.09G045300 Theobroma cacao HOM05D002813 ORTHO05D003203 5.6e-06 54.3 69 44.9
Potri.006G238300 Populus trichocarpa HOM05D002813 ORTHO05D003203 9.6e-06 53.5 61 47.5


User provided reference genes

Program Settings