Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN04G0910 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.8e-71 271.2 147 100.0
FvH4_5g12200 Fragaria vesca HOM05D002813 ORTHO05D003203 7.9e-50 200.7 144 71.5
FvH4_5g12190 Fragaria vesca HOM05D002813 ORTHO05D003203 3.0e-49 198.7 138 76.1
FAN18G2715 Fragaria x ananassa HOM05D002813 ORTHO05D003203 6.7e-49 197.6 138 75.4
FAN04G3192 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.6e-48 195.7 139 74.1
FAN04G1781 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.3e-48 195.3 144 71.5
FAN18G2625 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.8e-47 192.2 138 73.9
FAN18G1460 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.7e-40 167.9 134 67.9
FvH4_5g12211 Fragaria vesca HOM05D002813 ORTHO05D003203 1.7e-31 139.8 98 73.5
FvH4_3g40700 Fragaria vesca HOM05D002813 ORTHO05D003203 5.5e-27 124.8 142 51.4
FAN11G0908 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.5e-27 124.8 142 51.4
FAN16G0815 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.5e-27 124.8 142 51.4
FAN21G1994 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.7e-26 122.5 142 51.4
FAN25G1955 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.7e-26 121.7 142 51.4
FAN13G0265 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.2e-24 117.1 111 58.6
FAN18G3306 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.4e-24 115.2 146 47.9
FvH4_5g12160 Fragaria vesca HOM05D002813 ORTHO05D003203 8.3e-23 110.9 141 51.8
FAN04G2105 Fragaria x ananassa HOM05D002813 ORTHO05D003203 8.3e-23 110.9 141 51.8
RcHm_v2.0_Chr7g0185381 Rosa chinensis HOM05D002813 ORTHO05D003203 1.1e-22 110.5 75 70.7
FAN18G3569 Fragaria x ananassa HOM05D002813 ORTHO05D003203 7.0e-22 107.8 126 49.2
FAN08G1174 Fragaria x ananassa HOM05D002813 ORTHO05D003203 9.1e-22 107.5 141 50.4
FAN13G2791 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.2e-21 107.1 141 49.6
FAN18G0728 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.9e-21 104.8 72 76.4
FvH4_5g10370 Fragaria vesca HOM05D002813 ORTHO05D003203 1.0e-20 104.0 75 70.7
RcHm_v2.0_Chr5g0073471 Rosa chinensis HOM05D002813 ORTHO05D003203 2.3e-20 102.8 144 48.6
RcHm_v2.0_Chr2g0157391 Rosa chinensis HOM05D002813 ORTHO05D003203 3.3e-19 99.0 152 43.4
FvH4_7g07300 Fragaria vesca HOM05D002813 ORTHO05D003203 5.5e-19 98.2 140 47.1
RcHm_v2.0_Chr6g0307031 Rosa chinensis HOM05D002813 ORTHO05D003203 5.5e-19 98.2 137 46.7
FAN01G2630 Fragaria x ananassa HOM05D002813 ORTHO05D003203 9.5e-19 97.4 146 45.2
FvH4_5g12240 Fragaria vesca HOM05D002813 ORTHO05D003203 2.1e-18 96.3 144 45.8
FAN13G3008 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.8e-18 95.9 144 45.8
FAN18G4233 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.8e-18 95.9 143 46.2
FAN18G4406 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.7e-18 95.1 91 58.2
FAN18G1397 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.8e-17 93.2 118 51.7
QL12p041358 Quercus lobata HOM05D002813 ORTHO05D003203 1.8e-17 93.2 120 45.0
RcHm_v2.0_Chr7g0185371 Rosa chinensis HOM05D002813 ORTHO05D003203 2.3e-17 92.8 116 51.7
Prupe.1G448200 Prunus persica HOM05D002813 ORTHO05D003203 6.8e-17 91.3 120 47.5
QL12p041348 Quercus lobata HOM05D002813 ORTHO05D003203 1.2e-16 90.5 144 39.6
FvH4_2g34980 Fragaria vesca HOM05D002813 ORTHO05D003203 2.6e-16 89.4 138 42.0
FAN20G2873 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.6e-16 89.4 138 42.0
Sc23g0005220 Simmondsia chinensis HOM05D002813 ORTHO05D003203 2.6e-16 89.4 149 42.3
QL12p041353 Quercus lobata HOM05D002813 ORTHO05D003203 5.7e-16 88.2 120 45.8
FAN02G0699 Fragaria x ananassa HOM05D002813 ORTHO05D003203 7.5e-16 87.8 142 43.7
FAN02G4209 Fragaria x ananassa HOM05D002813 ORTHO05D003203 7.5e-16 87.8 142 43.7
FAN06G0128 Fragaria x ananassa HOM05D002813 ORTHO05D003203 7.5e-16 87.8 142 43.7
FAN06G0370 Fragaria x ananassa HOM05D002813 ORTHO05D003203 7.5e-16 87.8 142 43.7
FAN25G2464 Fragaria x ananassa HOM05D002813 ORTHO05D003203 7.5e-16 87.8 142 43.7
FAN27G2509 Fragaria x ananassa HOM05D002813 ORTHO05D003203 7.5e-16 87.8 138 41.3
CiPaw.07G204200 Carya illinoinensis HOM05D002813 ORTHO05D003203 9.8e-16 87.4 124 41.9
FAN02G4465 Fragaria x ananassa HOM05D002813 ORTHO05D003203 9.8e-16 87.4 152 39.5
FvH4_7g29850 Fragaria vesca HOM05D002813 ORTHO05D003203 1.3e-15 87.0 142 43.0
FvH4_2g35000 Fragaria vesca HOM05D002813 ORTHO05D003203 1.7e-15 86.7 117 42.7
RcHm_v2.0_Chr6g0307021 Rosa chinensis HOM05D002813 ORTHO05D003203 2.2e-15 86.3 114 48.2
FAN27G1144 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.7e-15 85.5 114 43.0
MD15G1093400 Malus domestica HOM05D002813 ORTHO05D003203 3.7e-15 85.5 127 41.7
Eucgr.C02935 Eucalyptus grandis HOM05D002813 ORTHO05D003203 8.3e-15 84.3 130 40.0
FAN15G0916 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.1e-14 84.0 117 41.9
Dinv27902 Davidia involucrata HOM05D002813 ORTHO05D003203 1.4e-14 83.6 120 44.2
Nn2g11622 Nelumbo nucifera HOM05D002813 ORTHO05D003203 1.4e-14 83.6 135 40.7
Nitab4.5_0003794g0040 Nicotiana tabacum HOM05D002813 ORTHO05D003203 1.4e-14 83.6 120 41.7
FAN05G5767 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.8e-14 83.2 140 40.0
FvH4_6g41671 Fragaria vesca HOM05D002813 ORTHO05D003203 4.1e-14 82.0 152 38.8
MSTRG.9106 Avicennia marina HOM05D002813 ORTHO05D003203 5.4e-14 81.6 122 44.3
FAN21G2238 Fragaria x ananassa HOM05D000437 ORTHO05D003203 9.2e-14 80.9 74 60.8
Nitab4.5_0028416g0010 Nicotiana tabacum HOM05D002813 ORTHO05D003203 1.2e-13 80.5 120 42.5
Potri.006G238300 Populus trichocarpa HOM05D002813 ORTHO05D003203 1.2e-13 80.5 114 42.1
Sopen08g020490 Solanum pennellii HOM05D002813 ORTHO05D003203 1.6e-13 80.1 120 38.3
PGSC0003DMG400002228 Solanum tuberosum HOM05D002813 ORTHO05D003203 1.6e-13 80.1 120 38.3
GSVIVG01035624001 Vitis vinifera HOM05D002813 ORTHO05D003203 3.5e-13 79.0 120 40.8
FvH4_3g11280 Fragaria vesca HOM05D002813 ORTHO05D003203 4.5e-13 78.6 151 44.4
FAN04G3253 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.5e-13 78.6 129 41.1
FAN14G5169 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.5e-13 78.6 118 47.5
Cc08_g09560 Coffea canephora HOM05D002813 ORTHO05D003203 7.8e-13 77.8 103 44.7
FAN20G0435 Fragaria x ananassa HOM05D002813 ORTHO05D003203 7.8e-13 77.8 102 44.1
FAN20G2926 Fragaria x ananassa HOM05D002813 ORTHO05D003203 7.8e-13 77.8 151 39.1
FvH4_6g07350 Fragaria vesca HOM05D002813 ORTHO05D003203 1.0e-12 77.4 145 35.9
FvH4_7g18342 Fragaria vesca HOM05D002813 ORTHO05D003203 1.0e-12 77.4 145 41.4
FAN27G0414 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.0e-12 77.4 114 43.0
FvH4_3g00150 Fragaria vesca HOM05D002813 ORTHO05D003203 1.3e-12 77.0 142 45.1
FvH4_2g32530 Fragaria vesca HOM05D002813 ORTHO05D003203 1.7e-12 76.6 147 40.8
FAN15G3400 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.3e-12 76.3 115 41.7
FAN14G4978 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.9e-12 75.9 123 41.5
Actinidia14674 Actinidia chinensis HOM05D002813 ORTHO05D003203 5.0e-12 75.1 113 40.7
FAN06G4693 Fragaria x ananassa HOM05D000201 ORTHO05D007118 6.6e-12 74.7 122 45.1
SEGI_23038 Sequoiadendron giganteum HOM05D002813 ORTHO05D003203 8.6e-12 74.3 126 31.0
FAN06G2895 Fragaria x ananassa HOM05D000201 ORTHO05D007118 1.1e-11 73.9 123 43.9
Ciclev10010367m.g Citrus clementina HOM05D002813 ORTHO05D003203 1.5e-11 73.6 114 37.7
Duzib168G2404 Durio zibethinus HOM05D002813 ORTHO05D003203 1.5e-11 73.6 119 37.0
FvH4_2g32590 Fragaria vesca HOM05D002813 ORTHO05D003203 1.5e-11 73.6 116 44.8
FAN24G0821 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.5e-11 73.6 116 44.8
FAN27G1770 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.5e-11 73.6 146 40.4
FAN27G2003 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.5e-11 73.6 121 44.6
FAN27G2375 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.5e-11 73.6 144 39.6
FvH4_2g32630 Fragaria vesca HOM05D002813 ORTHO05D003203 2.5e-11 72.8 125 37.6
CAN.G400.3 Capsicum annuum HOM05D002813 ORTHO05D003203 3.3e-11 72.4 119 37.0
FAN27G1742 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.3e-11 72.4 116 46.6
FAN24G2983 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.6e-11 71.6 97 44.3
FAN21G0510 Fragaria x ananassa HOM05D002813 ORTHO05D003203 7.3e-11 71.2 149 42.3
FvH4_2g32511 Fragaria vesca HOM05D002813 ORTHO05D003203 1.2e-10 70.5 143 37.1
FAN06G2359 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.2e-10 70.5 75 56.0
Gohir.D05G048500 Gossypium hirsutum HOM05D002813 ORTHO05D003203 1.2e-10 70.5 120 37.5
FvH4_2g37241 Fragaria vesca HOM05D002813 ORTHO05D003203 1.6e-10 70.1 141 42.6
Gohir.A05G046700 Gossypium hirsutum HOM05D002813 ORTHO05D003203 1.6e-10 70.1 120 37.5
FAN14G4635 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.1e-10 69.7 114 42.1
FAN24G2117 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.1e-10 69.7 140 37.1
SGA_v2.0_scaffold103G30003 Striga asiatica HOM05D002813 ORTHO05D003203 2.1e-10 69.7 118 39.8
TAR626G1934 Trochodendron aralioides HOM05D002813 ORTHO05D003203 2.1e-10 69.7 138 34.8
FAN25G0311 Fragaria x ananassa HOM05D000808 ORTHO05D000863 2.8e-10 69.3 147 40.8
FvH4_5g12191 Fragaria vesca HOM05D002813 ORTHO05D003203 3.6e-10 68.9 78 57.7
FAN15G1401 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.6e-10 68.9 115 41.7
Gorai.009G049800 Gossypium raimondii HOM05D002813 ORTHO05D003203 3.6e-10 68.9 120 36.7
Manes.16G075500 Manihot esculenta HOM05D002813 ORTHO05D003203 4.7e-10 68.6 112 35.7
CAN.G953.3 Capsicum annuum HOM05D002813 ORTHO05D003203 6.1e-10 68.2 103 37.9
RcHm_v2.0_Chr5g0073461 Rosa chinensis HOM05D002813 ORTHO05D003203 6.1e-10 68.2 101 43.6
CSS0022259 Camellia sinensis var. sinensis HOM05D002813 ORTHO05D003203 8.0e-10 67.8 69 50.7
FAN08G0212 Fragaria x ananassa HOM05D002813 ORTHO05D003203 8.0e-10 67.8 120 40.8
FvH4_6g10180 Fragaria vesca HOM05D004619 ORTHO05D003203 1.8e-09 66.6 120 39.2
FAN14G2999 Fragaria x ananassa HOM05D004619 ORTHO05D003203 1.8e-09 66.6 120 39.2
FAN02G3428 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.3e-09 66.2 103 42.7
FvH4_2g34990 Fragaria vesca HOM05D002813 ORTHO05D003203 4.0e-09 65.5 93 43.0
FAN13G0724 Fragaria x ananassa HOM05D001362 ORTHO05D001310 6.8e-09 64.7 154 34.4
Mapoly0100s0050 Marchantia polymorpha HOM05D002813 ORTHO05D003203 8.9e-09 64.3 129 31.8
Peaxi162Scf00227g00722 Petunia axillaris HOM05D002813 ORTHO05D003203 8.9e-09 64.3 102 40.2
ATR0705G192 Amborella trichopoda HOM05D002813 ORTHO05D003203 1.2e-08 63.9 133 31.6
Atru.chr7.2088 Acer truncatum HOM05D002813 ORTHO05D003203 3.4e-08 62.4 112 35.7
FvH4_1g05120 Fragaria vesca HOM05D002813 ORTHO05D003203 3.4e-08 62.4 110 42.7
FAN15G2356 Fragaria x ananassa HOM05D002813 ORTHO05D000003 9.8e-08 60.8 116 42.2
RcHm_v2.0_Chr7g0185401 Rosa chinensis HOM05D002813 ORTHO05D003203 9.8e-08 60.8 76 51.3
FvH4_2g32520 Fragaria vesca HOM05D002813 ORTHO05D003203 1.7e-07 60.1 135 37.0
FAN15G1653 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.7e-07 60.1 70 48.6
PGSC0003DMG400010583 Solanum tuberosum HOM05D002813 ORTHO05D003203 2.2e-07 59.7 89 37.1
FAN09G1205 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.7e-07 58.9 67 47.8
FAN15G1989 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.7e-07 58.9 107 40.2
SEGI_38686 Sequoiadendron giganteum HOM05D002813 ORTHO05D003203 4.9e-07 58.5 107 29.0
FvH4_2g32610 Fragaria vesca HOM05D002813 ORTHO05D003203 6.4e-07 58.2 107 40.2
FvH4_5g09361 Fragaria vesca HOM05D002813 ORTHO05D003203 1.1e-06 57.4 129 35.7
TWI63G1080 Tripterygium wilfordii HOM05D002813 ORTHO05D003203 1.1e-06 57.4 98 38.8
FAN21G0006 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.4e-06 57.0 140 37.9


User provided reference genes

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