Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN04G0887 Fragaria x ananassa HOM05D008080 ORTHO05D010244 4.9e-94 347.8 179 100.0
FAN08G1106 Fragaria x ananassa HOM05D008080 ORTHO05D010244 1.1e-80 303.5 188 88.3
FvH4_5g10080 Fragaria vesca HOM05D008080 ORTHO05D010244 1.8e-80 302.8 188 87.8
FAN18G1060 Fragaria x ananassa HOM05D008080 ORTHO05D010244 1.8e-80 302.8 188 87.8
RcHm_v2.0_Chr7g0188191 Rosa chinensis HOM05D008080 ORTHO05D010244 1.8e-67 259.6 194 76.8
MD06G1128100 Malus domestica HOM05D008080 ORTHO05D010244 1.1e-50 203.8 177 64.4
Prupe.5G137900 Prunus persica HOM05D008080 ORTHO05D010244 6.5e-46 188.0 175 60.6
Thecc.03G213000 Theobroma cacao HOM05D008080 ORTHO05D010244 1.1e-34 150.6 139 58.3
CiPaw.11G105600 Carya illinoinensis HOM05D008080 ORTHO05D010244 3.3e-34 149.1 137 59.9
QL02p026515 Quercus lobata HOM05D008080 ORTHO05D010244 2.8e-33 146.0 168 50.0
Duzib205G0863 Durio zibethinus HOM05D008080 ORTHO05D010244 6.3e-33 144.8 141 56.0
PGR031G3362 Punica granatum HOM05D008080 ORTHO05D010244 8.2e-33 144.4 183 51.4
Gohir.A03G078700 Gossypium hirsutum HOM05D008080 ORTHO05D010244 2.4e-32 142.9 171 50.9
Gohir.D03G089300 Gossypium hirsutum HOM05D008080 ORTHO05D010244 4.1e-32 142.1 153 54.9
Potri.001G454900 Populus trichocarpa HOM05D008080 ORTHO05D010244 1.5e-31 140.2 124 61.3
MBI04_g15074_MAGBIO Magnolia biondii HOM05D008080 ORTHO05D010244 2.6e-31 139.4 119 65.5
GSVIVG01019727001 Vitis vinifera HOM05D008080 ORTHO05D006305 7.7e-31 137.9 181 49.7
DCAR_028394 Daucus carota HOM05D008080 ORTHO05D010244 2.9e-30 136.0 165 53.3
Potri.011G147000 Populus trichocarpa HOM05D008080 ORTHO05D010244 3.8e-30 135.6 137 55.5
Lj2A146T28 Lonicera japonica HOM05D008080 ORTHO05D010244 1.1e-29 134.0 148 52.7
Aqoxy5G03619 Aquilegia oxysepala HOM05D008080 ORTHO05D010244 2.5e-29 132.9 147 54.4
CDE11G0346 Ceratophyllum demersum HOM05D008080 ORTHO05D010244 5.5e-29 131.7 126 59.5
CANSAT21G2269 Cannabis sativa HOM05D008080 ORTHO05D010244 9.4e-29 131.0 114 62.3
CDE09G0306 Ceratophyllum demersum HOM05D008080 ORTHO05D010244 9.4e-29 131.0 131 58.0
Os04g0577800 Oryza sativa ssp. japonica HOM05D008080 ORTHO05D010244 2.1e-28 129.8 116 62.1
CSS0035203 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 2.7e-28 129.4 137 56.9
Actinidia22242 Actinidia chinensis HOM05D008080 ORTHO05D010244 3.6e-28 129.0 124 58.9
Aa31LG6G7790 Aethionema arabicum HOM05D008080 ORTHO05D010244 3.0e-27 125.9 129 55.0
Zm00001eb073300 Zea mays HOM05D008080 ORTHO05D010244 6.7e-27 124.8 129 58.1
AL1G47660 Arabidopsis lyrata HOM05D008080 ORTHO05D010244 8.8e-27 124.4 143 48.3
Sp1g28720 Schrenkiella parvula HOM05D008080 ORTHO05D010244 5.7e-26 121.7 143 48.3
Carub.0001s3146 Capsella rubella HOM05D008080 ORTHO05D010244 7.4e-26 121.3 143 47.6
THA.LOC104806472 Tarenaya hassleriana HOM05D008080 ORTHO05D010244 1.3e-25 120.6 136 51.5
Thhalv10008894m.g Eutrema salsugineum HOM05D008080 ORTHO05D010244 2.2e-25 119.8 143 46.9
ECA246G2048 Erigeron canadensis HOM05D008080 ORTHO05D010244 2.8e-25 119.4 134 50.7
AT1G33265 Arabidopsis thaliana HOM05D008080 ORTHO05D010244 3.7e-25 119.0 143 46.2
CSS0020797 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 4.8e-25 118.6 131 55.0
CSS0025371 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 4.8e-25 118.6 131 55.0
CSS0037763 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 4.8e-25 118.6 131 55.0
CSS0040065 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 4.8e-25 118.6 131 55.0
A09p32970 Brassica napus HOM05D008080 ORTHO05D010244 6.3e-25 118.2 131 48.9
CARHR032630 Cardamine hirsuta HOM05D008080 ORTHO05D010244 6.3e-25 118.2 139 48.2
BcaB07g32963 Brassica carinata HOM05D008080 ORTHO05D010244 8.2e-25 117.9 130 50.8
CSS0004858 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 8.2e-25 117.9 131 54.2
BcaC08g43879 Brassica carinata HOM05D008080 ORTHO05D010244 1.1e-24 117.5 131 48.9
BolC6t36418H Brassica oleracea HOM05D008080 ORTHO05D010244 1.1e-24 117.5 131 48.9
BraA09t38837Z Brassica rapa HOM05D008080 ORTHO05D010244 1.1e-24 117.5 131 48.9
CSS0001168 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 1.8e-24 116.7 130 53.8
Gorai.003G072100 Gossypium raimondii HOM05D008080 ORTHO05D010244 1.8e-24 116.7 84 71.4
Lsat_1_v5_gn_3_13260 Lactuca sativa HOM05D008080 ORTHO05D010244 2.4e-24 116.3 143 49.0
HPP92_014501 Vanilla planifolia HOM05D008080 ORTHO05D010244 3.1e-24 115.9 115 56.5
C06p12680 Brassica napus HOM05D008080 ORTHO05D010244 4.1e-24 115.5 131 48.1
Thhalv10008954m.g Eutrema salsugineum HOM05D008080 ORTHO05D010244 5.3e-24 115.2 142 47.2
TWI81G0982 Tripterygium wilfordii HOM05D008080 ORTHO05D010244 7.0e-24 114.8 175 44.6
CSS0032680 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 2.6e-23 112.8 131 52.7
SMO114G0056 Selaginella moellendorffii HOM05D008080 ORTHO05D010244 1.0e-22 110.9 115 53.9
HanXRQChr17g0534021 Helianthus annuus HOM05D008080 ORTHO05D010244 5.0e-22 108.6 116 51.7
Nn5g27399 Nelumbo nucifera HOM05D008080 ORTHO05D010244 1.9e-21 106.7 100 61.0
COL.COLO4_20927 Corchorus olitorius HOM05D008080 ORTHO05D010244 5.5e-21 105.1 99 56.6
Rhsim02G0256000 Rhododendron simsii HOM05D008080 ORTHO05D010244 1.0e-19 100.9 165 42.4
CSS0042852 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 1.4e-19 100.5 131 51.1
Pp3c4_29930 Physcomitrium patens HOM05D008080 ORTHO05D010244 1.8e-19 100.1 144 42.4
Pp3c4_29940 Physcomitrium patens HOM05D008080 ORTHO05D010244 1.8e-19 100.1 144 42.4
CSS0010108 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 2.3e-19 99.8 123 54.5
Dinv03669 Davidia involucrata HOM05D008080 ORTHO05D010244 1.1e-16 90.9 65 70.8
ATR0620G064 Amborella trichopoda HOM05D008080 ORTHO05D010244 9.1e-16 87.8 84 57.1
Sabra16G0307700 Salix brachista HOM05D008080 ORTHO05D010244 1.6e-15 87.0 65 66.2
MBI04_g47856_MAGBIO Magnolia biondii HOM05D008080 ORTHO05D010244 6.5e-14 81.6 56 76.8
CBR_g15957 Chara braunii HOM05D000019 ORTHO05D000002 1.5e-10 70.5 103 41.7
Sabra11G0132200 Salix brachista HOM05D008080 ORTHO05D010244 9.1e-08 61.2 116 35.3
Eucgr.D02545 Eucalyptus grandis HOM05D008080 ORTHO05D010244 2.7e-07 59.7 60 56.7
Cpa.g.sc37.123 Carica papaya HOM05D008080 ORTHO05D010244 1.7e-06 57.0 74 44.6


User provided reference genes

Program Settings