Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN04G0671 Fragaria x ananassa HOM05D000003 ORTHO05D006737 2.3e-51 205.7 104 100.0
RcHm_v2.0_Chr1g0328181 Rosa chinensis HOM05D000003 ORTHO05D000004 1.5e-13 80.1 90 47.8
RcHm_v2.0_Chr2g0125521 Rosa chinensis HOM05D000003 ORTHO05D006737 1.2e-12 77.0 69 50.7
RcHm_v2.0_Chr3g0486981 Rosa chinensis HOM05D000003 ORTHO05D006737 1.2e-12 77.0 70 51.4
RcHm_v2.0_Chr5g0065261 Rosa chinensis HOM05D000003 ORTHO05D006737 1.2e-12 77.0 87 48.3
RcHm_v2.0_Chr6g0288751 Rosa chinensis HOM05D000003 ORTHO05D006737 1.2e-12 77.0 87 48.3
RcHm_v2.0_Chr1g0344421 Rosa chinensis HOM05D000003 ORTHO05D006737 2.8e-12 75.9 87 46.0
RcHm_v2.0_Chr5g0040041 Rosa chinensis HOM05D000003 ORTHO05D006737 2.8e-12 75.9 70 50.0
FAN16G3138 Fragaria x ananassa HOM05D000003 ORTHO05D006737 4.7e-12 75.1 65 49.2
RcHm_v2.0_Chr2g0118121 Rosa chinensis HOM05D000003 ORTHO05D006737 8.1e-12 74.3 67 52.2
RcHm_v2.0_Chr5g0031961 Rosa chinensis HOM05D000003 ORTHO05D006737 1.4e-11 73.6 70 48.6
FAN01G1551 Fragaria x ananassa HOM05D000003 ORTHO05D006737 2.3e-11 72.8 69 52.2
FvH4_3g25361 Fragaria vesca HOM05D000003 ORTHO05D006737 3.1e-11 72.4 87 47.1
FAN14G5848 Fragaria x ananassa HOM05D000003 ORTHO05D006737 3.1e-11 72.4 98 43.9
FAN18G0759 Fragaria x ananassa HOM05D000003 ORTHO05D006737 3.1e-11 72.4 70 50.0
FAN09G3474 Fragaria x ananassa HOM05D000003 ORTHO05D006737 5.2e-11 71.6 73 49.3
RcHm_v2.0_Chr7g0176911 Rosa chinensis HOM05D000003 ORTHO05D006737 6.8e-11 71.2 64 53.1
RcHm_v2.0_Chr1g0348191 Rosa chinensis HOM05D000003 ORTHO05D006737 8.9e-11 70.9 68 48.5
FvH4_3g30681 Fragaria vesca HOM05D000003 ORTHO05D000006 1.5e-10 70.1 69 50.7
FvH4_4g01552 Fragaria vesca HOM05D000003 ORTHO05D006737 1.5e-10 70.1 69 52.2
FvH4_3g32552 Fragaria vesca HOM05D000003 ORTHO05D006737 2.0e-10 69.7 68 48.5
FAN14G2822 Fragaria x ananassa HOM05D000003 ORTHO05D006737 2.0e-10 69.7 86 45.3
FvH4_6g08250 Fragaria vesca HOM05D000003 ORTHO05D006737 2.6e-10 69.3 86 45.3
FvH4_5g06193 Fragaria vesca HOM05D000003 ORTHO05D015112 3.4e-10 68.9 69 50.7
FvH4_2g00211 Fragaria vesca HOM05D000003 ORTHO05D006737 4.4e-10 68.6 69 50.7
FAN01G2436 Fragaria x ananassa HOM05D000003 ORTHO05D006737 5.8e-10 68.2 64 53.1
RcHm_v2.0_Chr7g0212601 Rosa chinensis HOM05D000003 ORTHO05D006737 5.8e-10 68.2 68 47.1
FAN03G1105 Fragaria x ananassa HOM05D000003 ORTHO05D006737 7.5e-10 67.8 67 50.7
RcHm_v2.0_Chr4g0397511 Rosa chinensis HOM05D000003 ORTHO05D006737 7.5e-10 67.8 70 44.3
RcHm_v2.0_Chr6g0286611 Rosa chinensis HOM05D000003 ORTHO05D006737 7.5e-10 67.8 65 50.8
FvH4_5g04911 Fragaria vesca HOM05D000003 ORTHO05D006737 9.8e-10 67.4 70 45.7
RcHm_v2.0_Chr6g0260491 Rosa chinensis HOM05D000003 ORTHO05D006737 9.8e-10 67.4 77 46.8
FvH4_4g20982 Fragaria vesca HOM05D000003 ORTHO05D006737 1.7e-09 66.6 67 43.3
RcHm_v2.0_Chr5g0033371 Rosa chinensis HOM05D000003 ORTHO05D006737 2.2e-09 66.2 68 50.0
FAN11G0642 Fragaria x ananassa HOM05D000355 ORTHO05D000227 2.9e-09 65.9 70 47.1
FAN25G3140 Fragaria x ananassa HOM05D000003 ORTHO05D006737 2.9e-09 65.9 59 47.5
FvH4_4g07172 Fragaria vesca HOM05D000003 ORTHO05D006737 3.7e-09 65.5 66 56.1
FAN12G2468 Fragaria x ananassa HOM05D000003 ORTHO05D006737 3.7e-09 65.5 72 48.6
RcHm_v2.0_Chr5g0036711 Rosa chinensis HOM05D000003 ORTHO05D006737 3.7e-09 65.5 54 59.3
FAN12G3592 Fragaria x ananassa HOM05D000003 ORTHO05D006737 4.9e-09 65.1 72 48.6
FAN20G2266 Fragaria x ananassa HOM05D000003 ORTHO05D006737 4.9e-09 65.1 67 47.8
FAN13G1105 Fragaria x ananassa HOM05D000003 ORTHO05D006737 6.4e-09 64.7 70 42.9
FAN05G1347 Fragaria x ananassa HOM05D015760 ORTHO05D020672 8.3e-09 64.3 58 51.7
FAN18G0619 Fragaria x ananassa HOM05D000003 ORTHO05D006737 1.1e-08 63.9 70 42.9
FvH4_3g20371 Fragaria vesca HOM05D000003 ORTHO05D000004 1.4e-08 63.5 67 40.3
FvH4_4g16971 Fragaria vesca HOM05D000003 ORTHO05D000004 1.4e-08 63.5 62 50.0
FAN19G2165 Fragaria x ananassa HOM05D007821 ORTHO05D009897 1.4e-08 63.5 55 54.5
RcHm_v2.0_Chr1g0314431 Rosa chinensis HOM05D000003 ORTHO05D006737 1.4e-08 63.5 68 48.5
RcHm_v2.0_Chr4g0395671 Rosa chinensis HOM05D000003 ORTHO05D006737 1.4e-08 63.5 87 41.4
RcHm_v2.0_Chr1g0336051 Rosa chinensis HOM05D000003 ORTHO05D006737 1.9e-08 63.2 68 45.6
FAN09G3586 Fragaria x ananassa HOM05D004387 ORTHO05D005218 2.4e-08 62.8 55 50.9
FAN26G0688 Fragaria x ananassa HOM05D000003 ORTHO05D006737 2.4e-08 62.8 61 54.1
FvH4_4g10782 Fragaria vesca HOM05D000003 ORTHO05D006737 3.2e-08 62.4 86 39.5
FvH4_5g01660 Fragaria vesca HOM05D000003 ORTHO05D006737 3.2e-08 62.4 54 53.7
RcHm_v2.0_Chr7g0198361 Rosa chinensis HOM05D000003 ORTHO05D006737 4.1e-08 62.0 71 43.7
FvH4_6g21171 Fragaria vesca HOM05D000003 ORTHO05D006737 7.1e-08 61.2 69 40.6
FAN28G0423 Fragaria x ananassa HOM05D000003 ORTHO05D006737 7.1e-08 61.2 65 49.2
FAN26G2731 Fragaria x ananassa HOM05D000003 ORTHO05D006737 9.2e-08 60.8 52 53.8
FvH4_6g32941 Fragaria vesca HOM05D000003 ORTHO05D006737 1.2e-07 60.5 69 40.6
FAN02G3749 Fragaria x ananassa HOM05D006625 ORTHO05D008060 1.2e-07 60.5 68 42.6
FAN07G0587 Fragaria x ananassa HOM05D000003 ORTHO05D006737 2.7e-07 59.3 69 43.5
RcHm_v2.0_Chr5g0004021 Rosa chinensis HOM05D000003 ORTHO05D006737 2.7e-07 59.3 69 40.6
FAN03G1976 Fragaria x ananassa HOM05D006382 ORTHO05D008938 3.5e-07 58.9 54 50.0
RcHm_v2.0_Chr3g0474921 Rosa chinensis HOM05D000003 ORTHO05D006737 3.5e-07 58.9 52 55.8
FAN14G3227 Fragaria x ananassa HOM05D000003 ORTHO05D006737 6.0e-07 58.2 55 47.3
FvH4_3g05282 Fragaria vesca HOM05D007268 ORTHO05D009152 7.8e-07 57.8 58 46.6
FvH4_5g01582 Fragaria vesca HOM05D000003 ORTHO05D006737 1.3e-06 57.0 55 47.3
FAN03G1347 Fragaria x ananassa HOM05D045966 ORTHO05D006737 1.3e-06 57.0 49 51.0
FvH4_1g25610 Fragaria vesca HOM05D000003 ORTHO05D000004 1.7e-06 56.6 57 40.4
FAN08G0755 Fragaria x ananassa HOM05D000003 ORTHO05D006737 1.7e-06 56.6 53 49.1
FAN19G2949 Fragaria x ananassa HOM05D000003 ORTHO05D006737 2.3e-06 56.2 57 40.4
FAN19G1976 Fragaria x ananassa HOM05D000003 ORTHO05D006737 3.0e-06 55.8 51 52.9
FAN22G0118 Fragaria x ananassa HOM05D001283 ORTHO05D001109 3.0e-06 55.8 69 42.0
FvH4_6g52701 Fragaria vesca HOM05D000003 ORTHO05D006737 3.9e-06 55.5 57 40.4
FvH4_5g31132 Fragaria vesca HOM05D002804 ORTHO05D006737 6.6e-06 54.7 54 48.1
RcHm_v2.0_Chr4g0423161 Rosa chinensis HOM05D000003 ORTHO05D006737 6.6e-06 54.7 55 49.1


User provided reference genes

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