Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN04G0566 Fragaria x ananassa HOM05D007480 ORTHO05D009460 2.3e-131 472.2 241 100.0
FAN13G2847 Fragaria x ananassa HOM05D007480 ORTHO05D009460 2.6e-122 442.2 260 90.4
FAN08G0292 Fragaria x ananassa HOM05D007480 ORTHO05D009460 4.4e-122 441.4 260 90.0
FvH4_5g32300 Fragaria vesca HOM05D007480 ORTHO05D009460 5.7e-122 441.0 260 89.6
FAN18G3845 Fragaria x ananassa HOM05D007480 ORTHO05D009460 5.7e-122 441.0 260 89.6
RcHm_v2.0_Chr7g0228561 Rosa chinensis HOM05D007480 ORTHO05D009460 1.4e-112 409.8 262 83.2
Prupe.1G551900 Prunus persica HOM05D007480 ORTHO05D009460 3.4e-82 308.9 264 67.0
MD15G1410800 Malus domestica HOM05D007480 ORTHO05D009460 3.4e-74 282.3 233 67.4
Dinv41738 Davidia involucrata HOM05D007480 ORTHO05D009460 2.4e-72 276.2 260 58.5
Eucgr.A00085 Eucalyptus grandis HOM05D007480 ORTHO05D009460 1.1e-69 267.3 215 64.2
Eucgr.A00280 Eucalyptus grandis HOM05D007480 ORTHO05D009460 4.3e-69 265.4 215 62.8
Thecc.02G332100 Theobroma cacao HOM05D007480 ORTHO05D009460 1.3e-68 263.8 211 64.0
COL.COLO4_27894 Corchorus olitorius HOM05D007480 ORTHO05D009460 4.8e-68 261.9 261 57.5
Lalb_Chr01g0000081 Lupinus albus HOM05D007480 ORTHO05D009460 2.4e-67 259.6 260 55.0
PGR102G3166 Punica granatum HOM05D007480 ORTHO05D009460 4.0e-67 258.8 222 60.4
Manes.02G194900 Manihot esculenta HOM05D007480 ORTHO05D009460 5.3e-67 258.5 258 55.4
Potri.013G109000 Populus trichocarpa HOM05D007480 ORTHO05D009460 5.3e-67 258.5 262 53.8
Gohir.D05G306500 Gossypium hirsutum HOM05D007480 ORTHO05D009460 6.9e-67 258.1 241 59.8
Gohir.A05G306500 Gossypium hirsutum HOM05D007480 ORTHO05D009460 1.2e-66 257.3 241 59.8
Gorai.009G326500 Gossypium raimondii HOM05D007480 ORTHO05D009460 2.6e-66 256.1 241 59.3
Sabra13G0094200 Salix brachista HOM05D007480 ORTHO05D009460 1.3e-65 253.8 241 56.0
Duzib268G1688 Durio zibethinus HOM05D007480 ORTHO05D009460 3.8e-65 252.3 240 57.9
arahy.Tifrunner.gnm1.ann1.GW2JVE Arachis hypogaea HOM05D007480 ORTHO05D009460 6.4e-65 251.5 258 53.1
arahy.Tifrunner.gnm1.ann1.F30TLU Arachis hypogaea HOM05D007480 ORTHO05D009460 1.1e-64 250.8 258 53.5
Lj3g0026365 Lotus japonicus HOM05D007480 ORTHO05D009460 1.1e-64 250.8 224 59.4
Atru.chr13.2407 Acer truncatum HOM05D007480 ORTHO05D009460 1.4e-64 250.4 200 63.0
CANSAT80G1517 Cannabis sativa HOM05D007480 ORTHO05D009460 3.2e-64 249.2 255 53.3
MSTRG.18184 Avicennia marina HOM05D007480 ORTHO05D009460 5.4e-64 248.4 253 54.5
Ciclev10002209m.g Citrus clementina HOM05D007480 ORTHO05D009460 5.4e-64 248.4 262 52.3
GSVIVG01012773001 Vitis vinifera HOM05D007480 ORTHO05D009460 5.4e-64 248.4 259 55.2
CSS0047761 Camellia sinensis var. sinensis HOM05D007480 ORTHO05D009460 7.1e-64 248.1 269 52.4
Carub.0006s2786 Capsella rubella HOM05D007480 ORTHO05D009460 1.2e-63 247.3 235 58.7
Cpa.g.c34217 Carica papaya HOM05D007480 ORTHO05D009460 1.2e-63 247.3 213 58.2
Sed0015242 Sechium edule HOM05D007480 ORTHO05D009460 1.2e-63 247.3 208 58.7
TAR381G1326 Trochodendron aralioides HOM05D007480 ORTHO05D009460 1.2e-63 247.3 261 55.9
Actinidia29416 Actinidia chinensis HOM05D006403 ORTHO05D008130 2.1e-63 246.5 238 54.6
MBI06_g20965_MAGBIO Magnolia biondii HOM05D007480 ORTHO05D009460 4.6e-63 245.4 215 59.5
Thhalv10028742m.g Eutrema salsugineum HOM05D007480 ORTHO05D009460 6.0e-63 245.0 229 58.1
CAN.G1351.3 Capsicum annuum HOM05D007480 ORTHO05D009460 2.3e-62 243.0 262 53.8
MELO3C002119.2 Cucumis melo HOM05D007480 ORTHO05D009460 5.1e-62 241.9 209 58.4
Migut.D00167 Erythranthe guttata HOM05D007480 ORTHO05D009460 5.1e-62 241.9 260 53.5
BcaB01g01404 Brassica carinata HOM05D007480 ORTHO05D009460 6.6e-62 241.5 237 55.3
AUR62022706 Chenopodium quinoa HOM05D007480 ORTHO05D009460 6.6e-62 241.5 259 54.1
Glyma.08G238600 Glycine max HOM05D007480 ORTHO05D009460 8.7e-62 241.1 204 58.3
THA.LOC104806791 Tarenaya hassleriana HOM05D007480 ORTHO05D009460 8.7e-62 241.1 260 53.5
Ca_19698_v3 Cicer arietinum L. HOM05D007480 ORTHO05D009460 1.1e-61 240.7 263 54.4
Aa31LG9G14810 Aethionema arabicum HOM05D007480 ORTHO05D009460 1.5e-61 240.4 207 60.9
EL10Ac1g00101 Beta vulgaris HOM05D007480 ORTHO05D009460 1.5e-61 240.4 262 53.4
CiPaw.03G019900 Carya illinoinensis HOM05D007480 ORTHO05D009460 1.5e-61 240.4 269 52.8
Nitab4.5_0002006g0060 Nicotiana tabacum HOM05D007480 ORTHO05D009460 1.5e-61 240.4 257 51.4
SalBow3G2539 Salvia bowleyana HOM05D007480 ORTHO05D009460 1.5e-61 240.4 253 52.2
A09p29520 Brassica napus HOM05D007480 ORTHO05D009460 1.9e-61 240.0 209 60.3
BraA09t38522Z Brassica rapa HOM05D007480 ORTHO05D009460 1.9e-61 240.0 209 60.3
Cc01_g20400 Coffea canephora HOM05D007480 ORTHO05D009460 1.9e-61 240.0 219 56.2
AL6G42980 Arabidopsis lyrata HOM05D007480 ORTHO05D009460 2.5e-61 239.6 209 60.3
BcaC04g20960 Brassica carinata HOM05D007480 ORTHO05D009460 3.3e-61 239.2 209 59.8
C09p37530 Brassica napus HOM05D007480 ORTHO05D009460 3.3e-61 239.2 209 59.8
BolC9t56583H Brassica oleracea HOM05D007480 ORTHO05D009460 3.3e-61 239.2 209 59.8
Solyc09g074610.3 Solanum lycopersicum HOM05D007480 ORTHO05D009460 7.4e-61 238.0 258 51.9
Sopen09g029480 Solanum pennellii HOM05D007480 ORTHO05D009460 1.3e-60 237.3 258 51.9
CsaV3_1G007010 Cucumis sativus L. HOM05D007480 ORTHO05D009460 1.6e-60 236.9 225 56.0
Nitab4.5_0001102g0040 Nicotiana tabacum HOM05D007480 ORTHO05D009460 2.1e-60 236.5 257 51.4
Sp6g08190 Schrenkiella parvula HOM05D007480 ORTHO05D009460 2.1e-60 236.5 225 56.0
DCAR_011524 Daucus carota HOM05D007480 ORTHO05D009460 2.8e-60 236.1 202 58.4
AUR62004631 Chenopodium quinoa HOM05D007480 ORTHO05D009460 6.2e-60 235.0 263 52.1
AT4G09350 Arabidopsis thaliana HOM05D007480 ORTHO05D009460 1.1e-59 234.2 209 57.9
Medtr4g032805 Medicago truncatula HOM05D007480 ORTHO05D009460 1.1e-59 234.2 227 58.6
Peaxi162Scf00067g02212 Petunia axillaris HOM05D007480 ORTHO05D009460 1.1e-59 234.2 257 49.8
Cfa008141 Carpinus fangiana HOM05D007480 ORTHO05D009460 1.4e-59 233.8 267 51.3
Glyma.12G001000 Glycine max HOM05D007480 ORTHO05D009460 1.8e-59 233.4 195 59.5
Lsat_1_v5_gn_6_28181 Lactuca sativa HOM05D007480 ORTHO05D009460 1.8e-59 233.4 210 55.2
PGSC0003DMG400011358 Solanum tuberosum HOM05D007480 ORTHO05D009460 1.8e-59 233.4 258 51.9
vmacro05317 Vaccinium macrocarpon HOM05D007480 ORTHO05D009460 2.6e-58 229.6 192 58.3
ClCG11G008560 Citrullus lanatus HOM05D007480 ORTHO05D009460 3.4e-58 229.2 219 54.8
Lj4A482T7 Lonicera japonica HOM05D007480 ORTHO05D009460 4.5e-58 228.8 257 52.1
ECA233G4677 Erigeron canadensis HOM05D007480 ORTHO05D009460 9.9e-58 227.6 209 56.0
Nn5g27577 Nelumbo nucifera HOM05D007480 ORTHO05D009460 2.9e-57 226.1 189 60.3
VMungo1127G0136 Vigna mungo HOM05D007480 ORTHO05D009460 3.8e-57 225.7 202 57.4
HanXRQChr13g0400541 Helianthus annuus HOM05D007480 ORTHO05D009460 1.4e-56 223.8 266 50.0
ATR1136G051 Amborella trichopoda HOM05D007480 ORTHO05D009460 2.4e-56 223.0 229 53.3
Phvul.011G001000 Phaseolus vulgaris HOM05D007480 ORTHO05D009460 5.5e-56 221.9 211 54.5
TPR.G34168 Trifolium pratense HOM05D007480 ORTHO05D009460 7.1e-56 221.5 216 55.6
Haze_13898 Corylus avellana HOM05D006728 ORTHO05D007911 2.7e-55 219.5 252 50.8
Rhsim11G0056000 Rhododendron simsii HOM05D007480 ORTHO05D009460 3.5e-55 219.2 260 48.8
PSO170G5383 Papaver somniferum HOM05D007480 ORTHO05D009460 1.3e-54 217.2 264 48.5
TWI23G0443 Tripterygium wilfordii HOM05D007480 ORTHO05D009460 3.9e-54 215.7 255 50.2
Aqoxy6G00136 Aquilegia oxysepala HOM05D007480 ORTHO05D009460 6.7e-54 214.9 227 48.0
Zm00001eb168470 Zea mays HOM05D007480 ORTHO05D009460 1.1e-53 214.2 252 48.8
Psat7g226080 Pisum sativum HOM05D007480 ORTHO05D009460 1.5e-53 213.8 256 50.4
PSO782G0771 Papaver somniferum HOM05D007480 ORTHO05D009460 9.6e-53 211.1 264 47.7
Os11g0216100 Oryza sativa ssp. japonica HOM05D007480 ORTHO05D009460 2.8e-52 209.5 192 54.2
unitig_0.g649 Utricularia gibba HOM05D007480 ORTHO05D009460 1.8e-51 206.8 192 54.2
CDE08G1358 Ceratophyllum demersum HOM05D007480 ORTHO05D009460 2.9e-49 199.5 200 51.0
Hund16791 Selenicereus undatus HOM05D007480 ORTHO05D009460 2.1e-47 193.4 188 54.8
CDE02G4331 Ceratophyllum demersum HOM05D007480 ORTHO05D009460 3.5e-47 192.6 216 47.2
CARHR260360 Cardamine hirsuta HOM05D007480 ORTHO05D009460 2.3e-46 189.9 136 70.6
Hma1.2p1_0503F.1_g168020 Hydrangea macrophylla HOM05D007480 ORTHO05D009460 4.1e-43 179.1 125 66.4
SEGI_04289 Sequoiadendron giganteum HOM05D007480 ORTHO05D009460 2.2e-36 156.8 189 48.1
Mapoly0007s0106 Marchantia polymorpha HOM05D007480 ORTHO05D009460 4.1e-27 125.9 215 40.0
AagrBONN_evm.TU.Sc2ySwM_117.2480 Anthoceros agrestis HOM05D007480 ORTHO05D009460 3.8e-25 119.4 224 33.0
Pp3c16_11130 Physcomitrium patens HOM05D007480 ORTHO05D009460 2.3e-22 110.2 243 33.7
Oeu047469.1 Olea europaea HOM05D000116 ORTHO05D000133 1.7e-20 104.0 178 36.5
SMO223G0044 Selaginella moellendorffii HOM05D007480 ORTHO05D009460 1.2e-18 97.8 230 30.4
CBR_g19925 Chara braunii HOM05D007480 ORTHO05D009460 2.7e-07 60.1 65 47.7


User provided reference genes

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