Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN04G0521 Fragaria x ananassa HOM05D007776 ORTHO05D009812 6.4e-67 257.3 132 100.0
FAN04G1877 Fragaria x ananassa HOM05D007776 ORTHO05D009812 1.2e-65 253.1 132 98.5
FAN08G2421 Fragaria x ananassa HOM05D007776 ORTHO05D009812 7.8e-65 250.4 132 97.0
FvH4_5g31870 Fragaria vesca HOM05D007776 ORTHO05D009812 3.3e-63 245.0 132 94.7
FAN18G1270 Fragaria x ananassa HOM05D007776 ORTHO05D009812 1.2e-60 236.5 124 96.0
RcHm_v2.0_Chr7g0227891 Rosa chinensis HOM05D007776 ORTHO05D009812 2.8e-54 215.3 133 86.5
MD15G1406800 Malus domestica HOM05D007776 ORTHO05D009812 4.1e-37 158.3 143 67.8
Prupe.1G555000 Prunus persica HOM05D007776 ORTHO05D009812 1.5e-36 156.4 135 68.1
Potri.013G107300 Populus trichocarpa HOM05D007776 ORTHO05D009812 9.1e-29 130.6 133 59.4
CANSAT25G0596 Cannabis sativa HOM05D007776 ORTHO05D009812 2.0e-28 129.4 117 61.5
Gohir.D05G288000 Gossypium hirsutum HOM05D007776 ORTHO05D009812 3.8e-27 125.2 126 61.1
Gorai.009G303100 Gossypium raimondii HOM05D007776 ORTHO05D009812 3.8e-27 125.2 126 61.1
Ciclev10002690m.g Citrus clementina HOM05D007776 ORTHO05D009812 6.5e-27 124.4 132 57.6
Manes.02G198100 Manihot esculenta HOM05D007776 ORTHO05D009812 1.9e-26 122.9 128 53.1
TWI14G0313 Tripterygium wilfordii HOM05D007776 ORTHO05D009812 2.1e-25 119.4 131 55.0
TWI59G0674 Tripterygium wilfordii HOM05D007776 ORTHO05D009812 1.4e-24 116.7 133 54.1
Gohir.A05G287000 Gossypium hirsutum HOM05D007776 ORTHO05D009812 1.8e-24 116.3 126 57.1
Haze_21304 Corylus avellana HOM05D007776 ORTHO05D009812 3.9e-24 115.2 132 53.8
Cfa012949 Carpinus fangiana HOM05D007776 ORTHO05D009812 8.8e-24 114.0 131 52.7
Sabra13G0092600 Salix brachista HOM05D007776 ORTHO05D009812 8.8e-24 114.0 128 57.8
CiPaw.05G123100 Carya illinoinensis HOM05D007776 ORTHO05D009812 1.1e-23 113.6 132 55.3
Potri.019G079800 Populus trichocarpa HOM05D007776 ORTHO05D009812 1.1e-23 113.6 129 55.8
Sabra19G0091100 Salix brachista HOM05D007776 ORTHO05D009812 1.1e-23 113.6 129 55.8
CiPaw.07G236300 Carya illinoinensis HOM05D007776 ORTHO05D009812 2.6e-23 112.5 132 54.5
THA.LOC104806792 Tarenaya hassleriana HOM05D007776 ORTHO05D009812 4.4e-23 111.7 143 53.8
Sp1g30150 Schrenkiella parvula HOM05D007776 ORTHO05D009812 5.7e-23 111.3 120 57.5
Aa31LG6G8730 Aethionema arabicum HOM05D007776 ORTHO05D009812 2.2e-22 109.4 129 55.0
Dinv41753 Davidia involucrata HOM05D000238 ORTHO05D002999 2.2e-22 109.4 120 55.8
BraA09t38716Z Brassica rapa HOM05D007776 ORTHO05D009812 4.8e-22 108.2 101 61.4
AL1G50270 Arabidopsis lyrata HOM05D007776 ORTHO05D009812 6.3e-22 107.8 122 52.5
BcaC08g43737 Brassica carinata HOM05D007776 ORTHO05D009812 8.2e-22 107.5 102 62.7
PGR042G2621 Punica granatum HOM05D007776 ORTHO05D009812 8.2e-22 107.5 132 55.3
Sed0008767 Sechium edule HOM05D007776 ORTHO05D009812 8.2e-22 107.5 112 56.2
A09p31800 Brassica napus HOM05D007776 ORTHO05D009812 1.1e-21 107.1 101 61.4
AT1G35430 Arabidopsis thaliana HOM05D007776 ORTHO05D009812 1.4e-21 106.7 101 59.4
C06p11140 Brassica napus HOM05D007776 ORTHO05D009812 1.4e-21 106.7 101 60.4
BolC6t36249H Brassica oleracea HOM05D007776 ORTHO05D009812 1.4e-21 106.7 101 60.4
Nn5g27525 Nelumbo nucifera HOM05D007776 ORTHO05D009812 3.1e-21 105.5 127 52.0
CARHR034200 Cardamine hirsuta HOM05D007776 ORTHO05D009812 4.1e-21 105.1 101 60.4
Carub.0001s3303 Capsella rubella HOM05D007776 ORTHO05D009812 6.9e-21 104.4 107 58.9
Ca_14480_v3 Cicer arietinum L. HOM05D007776 ORTHO05D009812 1.5e-20 103.2 127 50.4
Duzib177G0943 Durio zibethinus HOM05D007776 ORTHO05D009812 1.5e-20 103.2 126 49.2
VMungo1080G1686 Vigna mungo HOM05D007776 ORTHO05D009812 3.4e-20 102.1 113 55.8
Thhalv10001838m.g Eutrema salsugineum HOM05D007776 ORTHO05D009812 1.3e-19 100.1 119 52.1
MD08G1218400 Malus domestica HOM05D007776 ORTHO05D009812 6.5e-19 97.8 103 60.2
Medtr0045s0130 Medicago truncatula HOM05D007776 ORTHO05D009812 6.5e-19 97.8 132 47.7
Cpa.g.sc507.3 Carica papaya HOM05D007776 ORTHO05D009812 2.5e-18 95.9 112 51.8
Thecc.08G190700 Theobroma cacao HOM05D007776 ORTHO05D009812 3.2e-18 95.5 129 45.7
Psat5g210040 Pisum sativum HOM05D007776 ORTHO05D009812 7.2e-18 94.4 114 52.6
Duzib116G0238 Durio zibethinus HOM05D007776 ORTHO05D009812 9.4e-18 94.0 123 49.6
Lj3g0020626 Lotus japonicus HOM05D007776 ORTHO05D009812 2.7e-17 92.4 107 51.4
ClCG11G008540 Citrullus lanatus HOM05D007776 ORTHO05D009812 6.1e-17 91.3 143 46.9
TPR.G27845 Trifolium pratense HOM05D000479 ORTHO05D009812 6.1e-17 91.3 112 51.8
QL02p026198 Quercus lobata HOM05D007776 ORTHO05D009812 5.2e-16 88.2 127 45.7
Lalb_Chr25g0282901 Lupinus albus HOM05D007776 ORTHO05D009812 1.1e-15 87.0 105 52.4
Phvul.005G023800 Phaseolus vulgaris HOM05D007776 ORTHO05D009812 2.0e-15 86.3 104 51.0
Sp6g08370 Schrenkiella parvula HOM05D007776 ORTHO05D009812 2.0e-15 86.3 135 45.2
Thhalv10029064m.g Eutrema salsugineum HOM05D007776 ORTHO05D009812 7.4e-15 84.3 117 47.9
TAR628G0395 Trochodendron aralioides HOM05D007776 ORTHO05D009812 6.3e-14 81.3 102 51.0
Migut.C01313 Erythranthe guttata HOM05D007776 ORTHO05D009812 1.8e-13 79.7 131 42.7
CARHR260240 Cardamine hirsuta HOM05D007776 ORTHO05D009812 2.4e-13 79.3 116 48.3
Glyma.10G090400 Glycine max HOM05D007776 ORTHO05D009812 3.1e-13 79.0 101 53.5
Sopen01g034790 Solanum pennellii HOM05D007776 ORTHO05D009812 7.0e-13 77.8 109 47.7
BcaB01g02801 Brassica carinata HOM05D007776 ORTHO05D009812 1.2e-12 77.0 132 43.2
BcaC01g04727 Brassica carinata HOM05D007776 ORTHO05D009812 2.0e-12 76.3 113 50.4
Glyma.15G276200 Glycine max HOM05D007776 ORTHO05D009812 2.0e-12 76.3 79 59.5
AL6G42920 Arabidopsis lyrata HOM05D007776 ORTHO05D009812 2.6e-12 75.9 120 47.5
Solyc01g087860.2 Solanum lycopersicum HOM05D007776 ORTHO05D009812 2.6e-12 75.9 110 45.5
Ah.05g178510 Amaranthus hybridus HOM05D007776 ORTHO05D009812 1.0e-11 73.9 136 43.4
C03p34420 Brassica napus HOM05D007776 ORTHO05D009812 2.2e-11 72.8 113 49.6
BolC3t15751H Brassica oleracea HOM05D007776 ORTHO05D009812 2.2e-11 72.8 113 49.6
CSS0049282 Camellia sinensis var. sinensis HOM05D007776 ORTHO05D009812 3.8e-11 72.0 100 50.0
Rhsim12G0006900 Rhododendron simsii HOM05D007776 ORTHO05D009812 8.5e-11 70.9 98 50.0
PGSC0003DMG400006837 Solanum tuberosum HOM05D007776 ORTHO05D009812 2.5e-10 69.3 113 49.6
A03p28480 Brassica napus HOM05D007776 ORTHO05D009812 3.2e-10 68.9 113 46.0
BraA03t12053Z Brassica rapa HOM05D007776 ORTHO05D009812 3.2e-10 68.9 113 46.0
AT4G09170 Arabidopsis thaliana HOM05D007776 ORTHO05D009812 2.1e-09 66.2 120 41.7
Lsat_1_v5_gn_8_157180 Lactuca sativa HOM05D007776 ORTHO05D009812 3.6e-09 65.5 57 59.6
COL.COLO4_25869 Corchorus olitorius HOM05D007776 ORTHO05D009812 4.7e-09 65.1 48 64.6
Lsat_1_v5_gn_3_48301 Lactuca sativa HOM05D007776 ORTHO05D009812 1.4e-08 63.5 119 38.7
unitig_46.g17995 Utricularia gibba HOM05D007776 ORTHO05D009812 1.8e-08 63.2 98 38.8
EL10Ac1g00128 Beta vulgaris HOM05D007776 ORTHO05D009812 4.0e-08 62.0 142 39.4


User provided reference genes

Program Settings