Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN04G0512 Fragaria x ananassa HOM05D009201 ORTHO05D005238 3.8e-154 548.1 276 100.0
FAN08G2279 Fragaria x ananassa HOM05D009201 ORTHO05D005238 3.5e-139 498.4 264 95.5
FAN18G1345 Fragaria x ananassa HOM05D009201 ORTHO05D005238 1.2e-131 473.4 274 90.1
FAN13G1485 Fragaria x ananassa HOM05D009201 ORTHO05D005238 7.3e-81 304.7 192 82.3
RcHm_v2.0_Chr1g0320861 Rosa chinensis HOM05D009201 ORTHO05D005238 5.5e-52 208.8 157 64.3
FvH4_6g07632 Fragaria vesca HOM05D009201 ORTHO05D005238 2.7e-43 179.9 157 58.6
FAN08G0305 Fragaria x ananassa HOM05D009201 ORTHO05D005238 3.6e-43 179.5 157 58.0
FvH4_3g26062 Fragaria vesca HOM05D009201 ORTHO05D005238 1.0e-42 177.9 155 57.4
FvH4_2g13681 Fragaria vesca HOM05D009201 ORTHO05D005238 5.0e-37 159.1 227 46.3
FAN14G1768 Fragaria x ananassa HOM05D009201 ORTHO05D005238 1.0e-34 151.4 157 52.9
FAN17G0650 Fragaria x ananassa HOM05D009201 ORTHO05D005238 3.7e-32 142.9 144 54.2
FvH4_6g26370 Fragaria vesca HOM05D009201 ORTHO05D035607 1.7e-29 134.0 150 48.7
FvH4_6g05152 Fragaria vesca HOM05D007432 ORTHO05D005238 8.0e-27 125.2 175 39.4
FAN14G0817 Fragaria x ananassa HOM05D007432 ORTHO05D005238 2.6e-25 120.2 164 40.2
FAN19G3080 Fragaria x ananassa HOM05D009150 ORTHO05D005238 4.4e-25 119.4 152 39.5
FvH4_5g38943 Fragaria vesca HOM05D007432 ORTHO05D005238 2.2e-24 117.1 183 39.3
RcHm_v2.0_Chr3g0472781 Rosa chinensis HOM05D009201 ORTHO05D005238 8.2e-24 115.2 84 60.7
FAN18G3942 Fragaria x ananassa HOM05D007432 ORTHO05D005238 1.4e-23 114.4 165 37.0
FAN07G0659 Fragaria x ananassa HOM05D007432 ORTHO05D005238 3.1e-23 113.2 165 38.2
FAN22G0097 Fragaria x ananassa HOM05D009201 ORTHO05D005238 2.0e-22 110.5 218 35.3
FAN18G2146 Fragaria x ananassa HOM05D007432 ORTHO05D005238 5.9e-22 109.0 164 37.8
FvH4_5g23680 Fragaria vesca HOM05D018539 ORTHO05D005238 1.3e-21 107.8 116 44.0
FvH4_3g25832 Fragaria vesca HOM05D009201 ORTHO05D005238 2.2e-21 107.1 157 40.8
FAN11G2026 Fragaria x ananassa HOM05D007432 ORTHO05D005238 1.1e-20 104.8 165 35.8
FvH4_3g18871 Fragaria vesca HOM05D007432 ORTHO05D005238 1.5e-20 104.4 147 38.1
FAN03G2305 Fragaria x ananassa HOM05D009150 ORTHO05D005238 7.2e-20 102.1 155 36.1
FAN21G3598 Fragaria x ananassa HOM05D007432 ORTHO05D005238 7.2e-20 102.1 163 36.8
FvH4_4g21881 Fragaria vesca HOM05D009201 ORTHO05D005238 9.4e-20 101.7 155 41.3
FvH4_1g22101 Fragaria vesca HOM05D009150 ORTHO05D005238 4.7e-19 99.4 89 44.9
FAN09G1180 Fragaria x ananassa HOM05D009150 ORTHO05D005238 1.4e-18 97.8 89 43.8
FvH4_3g10870 Fragaria vesca HOM05D007432 ORTHO05D005238 8.8e-18 95.1 136 38.2
FvH4_5g15791 Fragaria vesca HOM05D007432 ORTHO05D005238 2.0e-17 94.0 172 36.0
FvH4_4g16721 Fragaria vesca HOM05D009201 ORTHO05D005238 1.7e-16 90.9 157 37.6
FvH4_2g14491 Fragaria vesca HOM05D007432 ORTHO05D005238 2.2e-16 90.5 132 37.9
FvH4_3g20011 Fragaria vesca HOM05D018539 ORTHO05D025542 2.2e-16 90.5 145 37.9
FvH4_2g07920 Fragaria vesca HOM05D007432 ORTHO05D005238 2.8e-16 90.1 129 39.5
FvH4_4g08041 Fragaria vesca HOM05D009201 ORTHO05D005238 2.8e-16 90.1 196 33.7
FAN05G2877 Fragaria x ananassa HOM05D007432 ORTHO05D005238 3.7e-16 89.7 108 40.7
FAN17G0381 Fragaria x ananassa HOM05D007432 ORTHO05D005238 4.8e-16 89.4 166 33.1
FAN20G1730 Fragaria x ananassa HOM05D007432 ORTHO05D005238 4.8e-16 89.4 108 38.9
FAN12G1939 Fragaria x ananassa HOM05D009201 ORTHO05D005238 1.8e-15 87.4 157 37.6
FAN03G0184 Fragaria x ananassa HOM05D007432 ORTHO05D005238 2.4e-15 87.0 165 32.7
FvH4_2g06802 Fragaria vesca HOM05D007432 ORTHO05D005238 1.2e-14 84.7 148 33.8
FAN06G2363 Fragaria x ananassa HOM05D007432 ORTHO05D005238 1.2e-14 84.7 113 42.5
FAN25G2326 Fragaria x ananassa HOM05D007432 ORTHO05D005238 1.2e-14 84.7 145 33.8
FAN05G1869 Fragaria x ananassa HOM05D007432 ORTHO05D005238 2.0e-14 84.0 102 41.2
FAN16G3690 Fragaria x ananassa HOM05D009150 ORTHO05D005238 4.5e-14 82.8 122 37.7
FvH4_2g07851 Fragaria vesca HOM05D007432 ORTHO05D005238 7.7e-14 82.0 115 40.0
FAN15G2286 Fragaria x ananassa HOM05D007432 ORTHO05D005238 2.2e-13 80.5 165 29.7
FAN24G0744 Fragaria x ananassa HOM05D007432 ORTHO05D005238 1.1e-12 78.2 107 41.1
FAN23G1579 Fragaria x ananassa HOM05D009201 ORTHO05D005238 1.9e-12 77.4 155 34.8
RcHm_v2.0_Chr7g0243191 Rosa chinensis HOM05D007432 ORTHO05D005238 4.2e-12 76.3 105 41.0
FvH4_6g14353 Fragaria vesca HOM05D007432 ORTHO05D005238 9.4e-12 75.1 96 40.6
FAN14G1548 Fragaria x ananassa HOM05D007432 ORTHO05D005238 1.4e-10 71.2 189 29.6
FAN27G0036 Fragaria x ananassa HOM05D007432 ORTHO05D005238 4.0e-10 69.7 164 27.4
FAN09G0991 Fragaria x ananassa HOM05D007432 ORTHO05D005238 6.8e-10 68.9 99 38.4
FvH4_6g31722 Fragaria vesca HOM05D009150 ORTHO05D005238 5.7e-09 65.9 151 29.8
FAN26G2577 Fragaria x ananassa HOM05D007432 ORTHO05D005238 5.7e-09 65.9 112 34.8
FAN25G0390 Fragaria x ananassa HOM05D003375 ORTHO05D004719 1.3e-08 64.7 156 28.8
FAN07G2346 Fragaria x ananassa HOM05D003375 ORTHO05D004719 2.8e-08 63.5 144 30.6
Lj4g0023781 Lotus japonicus HOM05D000003 ORTHO05D000126 2.8e-08 63.5 126 30.2
Lj6g0025856 Lotus japonicus HOM05D000003 ORTHO05D000126 3.7e-08 63.2 121 28.9
FAN02G1102 Fragaria x ananassa HOM05D009201 ORTHO05D005238 4.8e-08 62.8 96 40.6
LjContig00312_ERROPOS870357g0011324 Lotus japonicus HOM05D000003 ORTHO05D000126 6.3e-08 62.4 121 28.9
FvH4_6g30881 Fragaria vesca HOM05D007432 ORTHO05D005238 8.3e-08 62.0 126 37.3
FAN04G0389 Fragaria x ananassa HOM05D007432 ORTHO05D005238 1.1e-07 61.6 108 32.4
FAN16G2163 Fragaria x ananassa HOM05D007432 ORTHO05D005238 1.8e-07 60.8 66 45.5
FvH4_3g05891 Fragaria vesca HOM05D000003 ORTHO05D000126 2.4e-07 60.5 105 31.4
FvH4_7g16371 Fragaria vesca HOM05D008430 ORTHO05D010682 3.1e-07 60.1 159 30.8
FAN09G4175 Fragaria x ananassa HOM05D009201 ORTHO05D005238 3.1e-07 60.1 223 31.4
FvH4_2g14911 Fragaria vesca HOM05D003375 ORTHO05D004719 4.1e-07 59.7 104 33.7
FAN10G3952 Fragaria x ananassa HOM05D009150 ORTHO05D005238 5.4e-07 59.3 61 39.3
FAN22G0625 Fragaria x ananassa HOM05D017501 ORTHO05D020690 5.4e-07 59.3 83 37.3
FAN06G1617 Fragaria x ananassa HOM05D008119 ORTHO05D010214 7.0e-07 58.9 71 32.4
FAN27G1221 Fragaria x ananassa HOM05D003375 ORTHO05D004719 7.0e-07 58.9 107 33.6
FvH4_6g03011 Fragaria vesca HOM05D008430 ORTHO05D010682 9.1e-07 58.5 126 31.0
FAN06G0233 Fragaria x ananassa HOM05D008430 ORTHO05D010682 9.1e-07 58.5 157 28.7
FAN06G0355 Fragaria x ananassa HOM05D008430 ORTHO05D010682 9.1e-07 58.5 159 28.9
FvH4_5g37180 Fragaria vesca HOM05D000003 ORTHO05D011454 1.2e-06 58.2 190 27.9
FvH4_7g00272 Fragaria vesca HOM05D008119 ORTHO05D010214 1.2e-06 58.2 82 30.5
FAN05G5003 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.2e-06 58.2 136 23.5
RcHm_v2.0_Chr6g0265791 Rosa chinensis HOM05D003375 ORTHO05D004719 1.2e-06 58.2 96 36.5
QL04p012421 Quercus lobata HOM05D000003 ORTHO05D000126 1.6e-06 57.8 115 28.7
FAN14G2235 Fragaria x ananassa HOM05D003375 ORTHO05D004719 2.0e-06 57.4 133 31.6
RcHm_v2.0_Chr7g0191711 Rosa chinensis HOM05D000031 ORTHO05D000030 2.0e-06 57.4 75 40.0
FvH4_3g22921 Fragaria vesca HOM05D000003 ORTHO05D000126 2.7e-06 57.0 158 27.2
FAN21G1308 Fragaria x ananassa HOM05D008430 ORTHO05D010682 2.7e-06 57.0 160 29.4
FvH4_4g13551 Fragaria vesca HOM05D002480 ORTHO05D003145 3.5e-06 56.6 139 23.7
QL03p060676 Quercus lobata HOM05D000003 ORTHO05D000126 3.5e-06 56.6 102 30.4
COL.COLO4_29419 Corchorus olitorius HOM05D012333 ORTHO05D000126 4.5e-06 56.2 104 31.7
RcHm_v2.0_Chr1g0344871 Rosa chinensis HOM05D003375 ORTHO05D004719 4.5e-06 56.2 100 34.0
FvH4_5g12461 Fragaria vesca HOM05D002480 ORTHO05D003145 5.9e-06 55.8 134 25.4
FvH4_7g15960 Fragaria vesca HOM05D007432 ORTHO05D005238 5.9e-06 55.8 165 25.5
FAN26G1926 Fragaria x ananassa HOM05D003375 ORTHO05D004719 5.9e-06 55.8 103 31.1
QL03p061166 Quercus lobata HOM05D000003 ORTHO05D000126 5.9e-06 55.8 130 29.2
QL10p045745 Quercus lobata HOM05D000003 ORTHO05D000126 5.9e-06 55.8 90 31.1
CANSAT01G1830 Cannabis sativa HOM05D000003 ORTHO05D000126 7.7e-06 55.5 81 34.6
FAN10G2799 Fragaria x ananassa HOM05D000125 ORTHO05D000120 7.7e-06 55.5 58 37.9
FAN28G0175 Fragaria x ananassa HOM05D002480 ORTHO05D003145 7.7e-06 55.5 68 41.2
QL01p005367 Quercus lobata HOM05D000003 ORTHO05D000126 7.7e-06 55.5 121 28.1


User provided reference genes

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