Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN04G0479 Fragaria x ananassa HOM05D006894 ORTHO05D008724 7.9e-233 810.1 404 100.0
FAN08G3638 Fragaria x ananassa HOM05D006894 ORTHO05D008724 1.7e-211 739.2 421 89.3
FAN18G4164 Fragaria x ananassa HOM05D006894 ORTHO05D008724 6.5e-195 684.1 454 79.5
FvH4_5g29120 Fragaria vesca HOM05D006894 ORTHO05D008724 6.1e-193 677.6 417 83.7
RcHm_v2.0_Chr7g0221781 Rosa chinensis HOM05D006894 ORTHO05D008724 1.4e-192 676.4 422 83.4
Prupe.1G571400 Prunus persica HOM05D006894 ORTHO05D008724 8.3e-174 614.0 427 76.3
MD08G1235500 Malus domestica HOM05D006894 ORTHO05D008724 4.2e-170 601.7 423 75.4
Cfa005507 Carpinus fangiana HOM05D006894 ORTHO05D008724 3.9e-155 552.0 381 74.8
QL02p099211 Quercus lobata HOM05D006894 ORTHO05D008724 4.4e-151 538.5 425 68.2
CiPaw.05G048800 Carya illinoinensis HOM05D006894 ORTHO05D008724 1.7e-150 536.6 379 71.8
Atru.chr6.599 Acer truncatum HOM05D006894 ORTHO05D008724 5.0e-147 525.0 386 70.5
Atru.chr6.614 Acer truncatum HOM05D006894 ORTHO05D008724 1.5e-146 523.5 386 70.2
CANSAT11G1074 Cannabis sativa HOM05D006894 ORTHO05D008724 7.3e-146 521.2 408 66.9
Ciclev10001270m.g Citrus clementina HOM05D006894 ORTHO05D008724 9.5e-146 520.8 389 69.7
TAR628G1558 Trochodendron aralioides HOM05D006894 ORTHO05D008724 2.1e-145 519.6 410 66.6
Phvul.002G249600 Phaseolus vulgaris HOM05D006894 ORTHO05D008724 6.2e-145 518.1 406 65.8
Gorai.005G242400 Gossypium raimondii HOM05D006894 ORTHO05D008724 1.5e-143 513.5 391 67.0
GSVIVG01022874001 Vitis vinifera HOM05D006894 ORTHO05D008724 1.5e-143 513.5 366 72.7
Glyma.05G168900 Glycine max HOM05D006894 ORTHO05D008724 2.6e-143 512.7 399 66.2
VMungo0251G0921 Vigna mungo HOM05D006894 ORTHO05D008724 2.6e-143 512.7 394 68.3
FAN13G2283 Fragaria x ananassa HOM05D006894 ORTHO05D008724 5.8e-143 511.5 419 68.5
Gohir.D02G214600 Gossypium hirsutum HOM05D006894 ORTHO05D008724 9.9e-143 510.8 391 66.8
Thecc.02G114400 Theobroma cacao HOM05D006894 ORTHO05D008724 1.7e-142 510.0 375 68.3
Psat7g062040 Pisum sativum HOM05D006894 ORTHO05D008724 3.7e-142 508.8 416 63.9
TWI14G1412 Tripterygium wilfordii HOM05D006894 ORTHO05D008724 3.7e-142 508.8 373 68.6
Gohir.A03G193500 Gossypium hirsutum HOM05D006894 ORTHO05D008724 1.4e-141 506.9 391 66.2
Medtr8g088790 Medicago truncatula HOM05D006894 ORTHO05D008724 2.1e-140 503.1 418 63.4
Duzib248G0689 Durio zibethinus HOM05D006894 ORTHO05D008724 2.7e-140 502.7 391 67.0
TPR.G23092 Trifolium pratense HOM05D006894 ORTHO05D008724 3.5e-140 502.3 388 66.5
CARHR052050 Cardamine hirsuta HOM05D006894 ORTHO05D008724 1.7e-139 500.0 373 67.6
Nn1g08851 Nelumbo nucifera HOM05D006894 ORTHO05D008724 2.3e-139 499.6 387 65.1
CAN.G798.8 Capsicum annuum HOM05D006894 ORTHO05D008724 1.9e-138 496.5 387 65.1
COL.COLO4_11781 Corchorus olitorius HOM05D006894 ORTHO05D008724 3.3e-138 495.7 379 67.3
arahy.Tifrunner.gnm1.ann1.NZQI89 Arachis hypogaea HOM05D006894 ORTHO05D008724 4.3e-138 495.4 379 67.0
Thhalv10023478m.g Eutrema salsugineum HOM05D006894 ORTHO05D008724 4.3e-138 495.4 373 67.0
Manes.07G017700 Manihot esculenta HOM05D006894 ORTHO05D008724 5.6e-138 495.0 390 65.1
Ca_17824_v3 Cicer arietinum L. HOM05D006894 ORTHO05D008724 1.2e-137 493.8 362 69.9
AL2G15470 Arabidopsis lyrata HOM05D006894 ORTHO05D008724 3.6e-137 492.3 395 64.8
arahy.Tifrunner.gnm1.ann1.7VS6FJ Arachis hypogaea HOM05D006894 ORTHO05D008724 3.6e-137 492.3 376 66.8
Nitab4.5_0000816g0080 Nicotiana tabacum HOM05D006894 ORTHO05D008724 3.6e-137 492.3 378 65.1
Sp2g03530 Schrenkiella parvula HOM05D006894 ORTHO05D008724 3.6e-137 492.3 373 66.2
Lalb_Chr12g0204471 Lupinus albus HOM05D006894 ORTHO05D008724 8.1e-137 491.1 403 63.3
AT1G60990 Arabidopsis thaliana HOM05D006894 ORTHO05D008724 1.1e-136 490.7 383 65.5
Solyc01g104060.3 Solanum lycopersicum HOM05D006894 ORTHO05D008724 1.4e-136 490.3 371 66.0
Sopen01g046470 Solanum pennellii HOM05D006894 ORTHO05D008724 1.8e-136 490.0 371 66.0
CsaV3_6G037480 Cucumis sativus L. HOM05D006894 ORTHO05D008724 2.0e-135 486.5 370 67.0
PSO528G0189 Papaver somniferum HOM05D006894 ORTHO05D008724 5.8e-135 485.0 411 61.6
A01p29780 Brassica napus HOM05D006894 ORTHO05D008724 9.9e-135 484.2 368 66.3
Nitab4.5_0010336g0030 Nicotiana tabacum HOM05D006894 ORTHO05D008724 1.7e-134 483.4 369 66.1
Carub.0002s0422 Capsella rubella HOM05D006894 ORTHO05D008724 2.2e-134 483.0 378 65.1
Lj9A304G82 Lonicera japonica HOM05D006894 ORTHO05D008724 2.9e-134 482.6 384 65.4
Eucgr.G00568 Eucalyptus grandis HOM05D006894 ORTHO05D008724 4.9e-134 481.9 389 65.0
PSO170G1552 Papaver somniferum HOM05D006894 ORTHO05D008724 4.9e-134 481.9 409 61.1
Aqoxy6G00238 Aquilegia oxysepala HOM05D006894 ORTHO05D008724 1.1e-133 480.7 406 61.3
C01p37610 Brassica napus HOM05D006894 ORTHO05D008724 1.2e-132 477.2 368 65.5
BcaC09g49347 Brassica carinata HOM05D006894 ORTHO05D008724 1.6e-132 476.9 368 65.2
THA.LOC104809620 Tarenaya hassleriana HOM05D006894 ORTHO05D008724 3.5e-132 475.7 405 61.2
Lsat_1_v5_gn_9_118621 Lactuca sativa HOM05D006894 ORTHO05D008724 1.3e-131 473.8 363 66.1
HanXRQChr09g0249011 Helianthus annuus HOM05D006894 ORTHO05D008724 6.6e-131 471.5 396 61.9
Aa31LG2G9600 Aethionema arabicum HOM05D006894 ORTHO05D008724 2.5e-130 469.5 383 62.9
Peaxi162Scf00017g02640 Petunia axillaris HOM05D006894 ORTHO05D008724 5.6e-130 468.4 342 67.8
Lj4g0002387 Lotus japonicus HOM05D006894 ORTHO05D008724 7.3e-130 468.0 395 63.0
Oeu027798.1 Olea europaea HOM05D006894 ORTHO05D008724 1.1e-128 464.2 377 64.7
vmacro01754 Vaccinium macrocarpon HOM05D006894 ORTHO05D008724 4.0e-128 462.2 416 59.6
PGSC0003DMG400023767 Solanum tuberosum HOM05D006894 ORTHO05D008724 6.9e-128 461.5 388 62.1
Migut.B00823 Erythranthe guttata HOM05D006894 ORTHO05D008724 1.5e-127 460.3 378 61.6
Sed0001229 Sechium edule HOM05D006894 ORTHO05D008724 1.7e-126 456.8 351 66.7
Peaxi162Scf00011g00531 Petunia axillaris HOM05D006894 ORTHO05D008724 4.2e-125 452.2 374 62.0
DCAR_006702 Daucus carota HOM05D006894 ORTHO05D008724 5.4e-125 451.8 420 57.1
CDE08G1218 Ceratophyllum demersum HOM05D006894 ORTHO05D008724 9.3e-125 451.1 388 60.3
ECA240G3758 Erigeron canadensis HOM05D006894 ORTHO05D008724 1.6e-124 450.3 375 62.1
Cc02_g22630 Coffea canephora HOM05D006894 ORTHO05D008724 1.9e-122 443.4 389 61.2
PGR042G0448 Punica granatum HOM05D006894 ORTHO05D008724 2.8e-121 439.5 364 62.6
Dinv19376 Davidia involucrata HOM05D006894 ORTHO05D008724 4.8e-121 438.7 282 76.6
Sc15g0002580 Simmondsia chinensis HOM05D006894 ORTHO05D008724 8.1e-121 438.0 366 60.4
MSTRG.20303 Avicennia marina HOM05D006894 ORTHO05D008724 1.2e-119 434.1 378 61.4
BcaB04g20304 Brassica carinata HOM05D006894 ORTHO05D008724 1.7e-118 430.3 370 60.5
Actinidia39033 Actinidia chinensis HOM05D006894 ORTHO05D008724 2.2e-118 429.9 347 64.6
MBI06_g01072_MAGBIO Magnolia biondii HOM05D006894 ORTHO05D008724 1.6e-116 423.7 478 51.0
Rhsim11G0128300 Rhododendron simsii HOM05D006894 ORTHO05D008724 2.7e-116 422.9 444 54.1
ATR0665G083 Amborella trichopoda HOM05D006894 ORTHO05D008724 1.9e-114 416.8 355 60.3
SEGI_07604 Sequoiadendron giganteum HOM05D006894 ORTHO05D008724 1.9e-109 400.2 373 55.5
Actinidia30531 Actinidia chinensis HOM05D006894 ORTHO05D008724 4.6e-108 395.6 357 59.7
AagrBONN_evm.TU.Sc2ySwM_344.1590 Anthoceros agrestis HOM05D006894 ORTHO05D007218 3.9e-99 365.9 310 59.7
Haze_01731 Corylus avellana HOM05D006894 ORTHO05D008724 5.1e-99 365.5 433 51.0
BraA01t03106Z Brassica rapa HOM05D006894 ORTHO05D008724 6.7e-99 365.2 236 74.2
Mapoly0039s0108 Marchantia polymorpha HOM05D006894 ORTHO05D008724 5.7e-98 362.1 374 50.3
BolC1t03726H Brassica oleracea HOM05D006894 ORTHO05D008724 7.4e-98 361.7 236 73.3
MELO3C014368.2 Cucumis melo HOM05D006894 ORTHO05D008724 1.2e-95 354.4 414 50.5
SMO119G0367 Selaginella moellendorffii HOM05D006894 ORTHO05D008724 6.5e-94 348.6 338 53.0
Pp3c9_20800 Physcomitrium patens HOM05D006894 ORTHO05D008724 4.1e-88 329.3 360 48.6
unitig_749.g14128 Utricularia gibba HOM05D006894 ORTHO05D008724 1.7e-86 323.9 294 56.5
CBR_g30837 Chara braunii HOM05D000019 ORTHO05D000048 2.6e-79 300.1 332 48.5
CSS0024184 Camellia sinensis var. sinensis HOM05D006894 ORTHO05D008724 5.9e-79 298.9 425 44.9
SEGI_10844 Sequoiadendron giganteum HOM05D006894 ORTHO05D008724 5.3e-64 249.2 332 45.2
Cre12.g552850 Chlamydomonas reinhardtii HOM05D006894 ORTHO05D008724 2.9e-54 216.9 354 39.3
Rhsim09G0048600 Rhododendron simsii HOM05D006894 ORTHO05D008724 6.1e-44 182.6 362 37.6
Rhsim09G0016000 Rhododendron simsii HOM05D006894 ORTHO05D008724 9.2e-40 168.7 188 49.5
Cpa.g.sc30.18 Carica papaya HOM05D006894 ORTHO05D008724 2.3e-30 137.5 141 56.0
ClCG09G014030 Citrullus lanatus HOM05D006894 ORTHO05D008724 5.6e-29 132.9 130 56.2
Cpa.g.sc30.19 Carica papaya HOM05D006894 ORTHO05D008724 5.8e-26 122.9 112 54.5
ClCG09G014040 Citrullus lanatus HOM05D006894 ORTHO05D008724 9.9e-26 122.1 78 70.5
BcaB01g03502 Brassica carinata HOM05D006894 ORTHO05D008724 2.9e-25 120.6 153 45.8
Pp3c5_7230 Physcomitrium patens HOM05D006894 ORTHO05D008724 4.6e-23 113.2 169 39.6
ClCG09G014050 Citrullus lanatus HOM05D006894 ORTHO05D008724 5.6e-21 106.3 115 53.0
Solyc09g015460.3 Solanum lycopersicum HOM05D006894 ORTHO05D008724 9.5e-21 105.5 58 82.8
BcaB02g10691 Brassica carinata HOM05D000189 ORTHO05D000474 1.2e-20 105.1 112 50.0
BcaB05g23073 Brassica carinata HOM05D006894 ORTHO05D008724 1.2e-20 105.1 110 54.5
unitig_749.g14127 Utricularia gibba HOM05D006894 ORTHO05D008724 2.6e-18 97.4 76 63.2
PRCOL_00004673 Prasinoderma coloniale HOM05D006894 ORTHO05D008724 4.4e-18 96.7 378 26.5
CDE06G1775 Ceratophyllum demersum HOM05D006894 ORTHO05D008724 2.4e-16 90.9 211 33.6
CAN.G798.10 Capsicum annuum HOM05D006894 ORTHO05D008724 7.1e-16 89.4 165 32.7
Glyma.08G127500 Glycine max HOM05D006894 ORTHO05D008724 4.3e-13 80.1 67 56.7
Peaxi162Scf01350g00016 Petunia axillaris HOM05D006894 ORTHO05D008724 1.6e-12 78.2 52 71.2
Cpa.g.sc3656.1 Carica papaya HOM05D006894 ORTHO05D008724 2.8e-12 77.4 82 53.7
Phvul.006G148700 Phaseolus vulgaris HOM05D004784 ORTHO05D005762 4.6e-07 60.1 333 23.7
Pp3c12_9500 Physcomitrium patens HOM05D004784 ORTHO05D005762 2.3e-06 57.8 341 22.3
Pp3c4_15010 Physcomitrium patens HOM05D004784 ORTHO05D005762 6.6e-06 56.2 347 22.5


User provided reference genes

Program Settings