Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN04G0466 Fragaria x ananassa HOM05D004587 ORTHO05D005512 3.6e-77 291.6 154 100.0
FAN08G2253 Fragaria x ananassa HOM05D004587 ORTHO05D005512 8.3e-74 280.4 155 94.2
FAN18G4447 Fragaria x ananassa HOM05D004587 ORTHO05D005512 1.2e-72 276.6 154 92.9
FvH4_5g21840 Fragaria vesca HOM05D004587 ORTHO05D005512 1.6e-72 276.2 154 93.5
FAN13G1185 Fragaria x ananassa HOM05D004587 ORTHO05D005512 3.2e-70 268.5 155 93.5
RcHm_v2.0_Chr7g0209351 Rosa chinensis HOM05D004587 ORTHO05D005512 8.0e-61 237.3 154 79.2
Prupe.5G039100 Prunus persica HOM05D004587 ORTHO05D005512 2.3e-52 209.1 157 66.9
MD06G1032800 Malus domestica HOM05D004587 ORTHO05D005512 1.8e-44 183.0 155 61.3
Potri.003G090600 Populus trichocarpa HOM05D004587 ORTHO05D005512 1.3e-42 176.8 165 59.4
CiPaw.11G092100 Carya illinoinensis HOM05D004587 ORTHO05D005512 2.9e-42 175.6 158 56.3
Thecc.03G229700 Theobroma cacao HOM05D004587 ORTHO05D005512 2.9e-42 175.6 164 58.5
Atru.chr6.1737 Acer truncatum HOM05D004587 ORTHO05D005512 1.4e-41 173.3 158 55.7
Gohir.D08G177900 Gossypium hirsutum HOM05D004587 ORTHO05D005512 7.1e-41 171.0 159 53.5
Duzib068G1306 Durio zibethinus HOM05D004587 ORTHO05D005512 9.2e-41 170.6 162 58.6
Gorai.004G186100 Gossypium raimondii HOM05D004587 ORTHO05D005512 9.2e-41 170.6 159 53.5
Gohir.A08G157600 Gossypium hirsutum HOM05D004587 ORTHO05D005512 1.6e-40 169.9 159 53.5
Potri.001G143600 Populus trichocarpa HOM05D004587 ORTHO05D005512 3.5e-40 168.7 165 54.5
CANSAT21G0306 Cannabis sativa HOM05D004587 ORTHO05D005512 4.3e-38 161.8 158 57.0
Dinv25204 Davidia involucrata HOM05D004587 ORTHO05D005512 4.3e-38 161.8 158 53.2
PGR042G1036 Punica granatum HOM05D004587 ORTHO05D005512 9.5e-38 160.6 159 56.6
Dinv28943 Davidia involucrata HOM05D004587 ORTHO05D005512 1.2e-37 160.2 158 55.1
Manes.15G168700 Manihot esculenta HOM05D004587 ORTHO05D005512 1.6e-37 159.8 171 54.4
Psat2g173440 Pisum sativum HOM05D004587 ORTHO05D005512 4.7e-37 158.3 159 52.2
GSVIVG01013197001 Vitis vinifera HOM05D004587 ORTHO05D005512 4.7e-37 158.3 159 50.3
Solyc06g061140.3 Solanum lycopersicum HOM05D004587 ORTHO05D005512 6.2e-37 157.9 158 52.5
Nitab4.5_0006066g0030 Nicotiana tabacum HOM05D004587 ORTHO05D005512 1.1e-36 157.1 159 54.7
TWI81G0220 Tripterygium wilfordii HOM05D004587 ORTHO05D005512 1.1e-36 157.1 158 51.9
PGSC0003DMG402002106 Solanum tuberosum HOM05D004587 ORTHO05D005512 1.4e-36 156.8 158 53.2
Oeu035388.1 Olea europaea HOM05D004587 ORTHO05D005512 4.0e-36 155.2 170 50.0
THA.LOC104812836 Tarenaya hassleriana HOM05D004587 ORTHO05D005512 4.0e-36 155.2 168 53.0
CSS0021945 Camellia sinensis var. sinensis HOM05D004587 ORTHO05D005512 8.9e-36 154.1 160 53.1
CSS0032807 Camellia sinensis var. sinensis HOM05D004587 ORTHO05D005512 8.9e-36 154.1 160 53.1
Peaxi162Scf00615g00515 Petunia axillaris HOM05D004587 ORTHO05D005512 8.9e-36 154.1 159 53.5
Hund14406 Selenicereus undatus HOM05D004587 ORTHO05D005512 8.9e-36 154.1 162 53.7
Nitab4.5_0000256g0420 Nicotiana tabacum HOM05D004587 ORTHO05D005512 1.5e-35 153.3 159 54.1
Hma1.2p1_0991F.1_g245040 Hydrangea macrophylla HOM05D004587 ORTHO05D005512 2.0e-35 152.9 153 55.6
Manes.17G011700 Manihot esculenta HOM05D004587 ORTHO05D005512 2.0e-35 152.9 160 56.2
Sopen06g021340 Solanum pennellii HOM05D004587 ORTHO05D005512 2.0e-35 152.9 158 51.3
COL.COLO4_17061 Corchorus olitorius HOM05D004587 ORTHO05D005512 5.8e-35 151.4 197 45.2
MD16G1276500 Malus domestica HOM05D004587 ORTHO05D005512 5.8e-35 151.4 143 62.2
PGSC0003DMG400017533 Solanum tuberosum HOM05D004587 ORTHO05D005512 9.9e-35 150.6 163 49.7
TWI60G1364 Tripterygium wilfordii HOM05D004587 ORTHO05D005512 9.9e-35 150.6 158 50.6
MELO3C003396.2 Cucumis melo HOM05D004587 ORTHO05D005512 1.3e-34 150.2 158 48.1
arahy.Tifrunner.gnm1.ann1.QWZQ79 Arachis hypogaea HOM05D004587 ORTHO05D005512 1.7e-34 149.8 159 51.6
arahy.Tifrunner.gnm1.ann1.VNVR7L Arachis hypogaea HOM05D004587 ORTHO05D005512 1.7e-34 149.8 159 51.6
ClCG09G012070 Citrullus lanatus HOM05D004587 ORTHO05D005512 1.7e-34 149.8 158 48.7
CsaV3_3G049300 Cucumis sativus L. HOM05D004587 ORTHO05D005512 2.9e-34 149.1 158 47.5
TPR.G7834 Trifolium pratense HOM05D004587 ORTHO05D005512 2.9e-34 149.1 157 53.5
Duzib205G0684 Durio zibethinus HOM05D004587 ORTHO05D005512 3.7e-34 148.7 165 54.5
TAR629G0873 Trochodendron aralioides HOM05D004587 ORTHO05D005512 3.7e-34 148.7 157 49.7
Actinidia09217 Actinidia chinensis HOM05D004587 ORTHO05D005512 4.9e-34 148.3 160 47.5
CiPaw.12G062400 Carya illinoinensis HOM05D004587 ORTHO05D005512 4.9e-34 148.3 155 51.0
Nitab4.5_0001285g0020 Nicotiana tabacum HOM05D004587 ORTHO05D005512 1.1e-33 147.1 158 50.0
Sp7g16150 Schrenkiella parvula HOM05D004587 ORTHO05D005512 1.1e-33 147.1 159 48.4
SGA_v2.0_scaffold108G30874 Striga asiatica HOM05D004587 ORTHO05D005512 1.1e-33 147.1 164 50.0
Cc08_g02530 Coffea canephora HOM05D004587 ORTHO05D005512 1.4e-33 146.7 158 50.0
Sopen08g025620 Solanum pennellii HOM05D004587 ORTHO05D005512 1.4e-33 146.7 163 49.7
Actinidia25956 Actinidia chinensis HOM05D004587 ORTHO05D005512 2.4e-33 146.0 158 47.5
TAR375G0250 Trochodendron aralioides HOM05D004587 ORTHO05D005512 2.4e-33 146.0 157 54.1
Rhsim07G0126100 Rhododendron simsii HOM05D004587 ORTHO05D005512 4.1e-33 145.2 159 48.4
Sed0004713 Sechium edule HOM05D004587 ORTHO05D005512 4.1e-33 145.2 158 49.4
Lj2g0006519 Lotus japonicus HOM05D004587 ORTHO05D005512 5.4e-33 144.8 153 55.6
Thhalv10027517m.g Eutrema salsugineum HOM05D004587 ORTHO05D005512 7.1e-33 144.4 160 47.5
Nn6g33612 Nelumbo nucifera HOM05D004587 ORTHO05D005512 7.1e-33 144.4 157 51.0
Solyc08g077040.3 Solanum lycopersicum HOM05D004587 ORTHO05D005512 9.2e-33 144.1 163 47.2
Actinidia14814 Actinidia chinensis HOM05D004587 ORTHO05D005512 1.2e-32 143.7 160 51.2
vmacro14165 Vaccinium macrocarpon HOM05D004587 ORTHO05D005512 1.2e-32 143.7 159 47.2
C01p11800 Brassica napus HOM05D004587 ORTHO05D005512 1.6e-32 143.3 155 48.4
DCAR_008278 Daucus carota HOM05D004587 ORTHO05D005512 3.5e-32 142.1 161 50.3
Lalb_Chr16g0379161 Lupinus albus HOM05D004587 ORTHO05D005512 3.5e-32 142.1 154 53.2
AL7G36550 Arabidopsis lyrata HOM05D004587 ORTHO05D005512 4.6e-32 141.7 154 48.1
BolC1t01142H Brassica oleracea HOM05D004587 ORTHO05D005512 4.6e-32 141.7 155 48.4
Sed0024230 Sechium edule HOM05D004587 ORTHO05D005512 4.6e-32 141.7 158 47.5
AT4G17960 Arabidopsis thaliana HOM05D004587 ORTHO05D005512 7.8e-32 141.0 154 47.4
BcaNung00040 Brassica carinata HOM05D004587 ORTHO05D005512 1.0e-31 140.6 166 45.8
Migut.C00969 Erythranthe guttata HOM05D004587 ORTHO05D005512 1.0e-31 140.6 168 51.8
Sc22g0001460 Simmondsia chinensis HOM05D004587 ORTHO05D005512 1.0e-31 140.6 160 50.6
BcaC09g51581 Brassica carinata HOM05D004587 ORTHO05D005512 1.3e-31 140.2 155 47.7
A01p10000 Brassica napus HOM05D004587 ORTHO05D005512 2.3e-31 139.4 155 47.7
CAN.G201.22 Capsicum annuum HOM05D004587 ORTHO05D005512 2.3e-31 139.4 158 48.7
Eucgr.E00288 Eucalyptus grandis HOM05D004587 ORTHO05D005512 3.9e-31 138.7 170 48.2
BraA01t00944Z Brassica rapa HOM05D004587 ORTHO05D005512 1.1e-30 137.1 155 47.1
Carub.0007s2338 Capsella rubella HOM05D004587 ORTHO05D005512 1.1e-30 137.1 158 46.8
SHI31713 Sapria himalayana HOM05D000449 ORTHO05D000360 4.3e-30 135.2 153 46.4
QL12p005998 Quercus lobata HOM05D004587 ORTHO05D005512 5.6e-30 134.8 223 39.5
SGA_v2.0_scaffold195G40785 Striga asiatica HOM05D004587 ORTHO05D005512 7.3e-30 134.4 163 46.6
Peaxi162Scf00460g00412 Petunia axillaris HOM05D004587 ORTHO05D005512 1.6e-29 133.3 160 48.1
AUR62007272 Chenopodium quinoa HOM05D004587 ORTHO05D005512 2.1e-29 132.9 166 45.8
MSTRG.1101 Avicennia marina HOM05D004587 ORTHO05D005512 6.2e-29 131.3 159 45.3
SalBow7G3710 Salvia bowleyana HOM05D004587 ORTHO05D005512 1.1e-28 130.6 200 40.5
Lj2C242G4 Lonicera japonica HOM05D004587 ORTHO05D005512 1.4e-28 130.2 149 48.3
CARHR224700 Cardamine hirsuta HOM05D004587 ORTHO05D005512 2.4e-28 129.4 162 43.2
Aa31LG6G710 Aethionema arabicum HOM05D004587 ORTHO05D005512 3.1e-28 129.0 154 44.2
Sabra03G0060300 Salix brachista HOM05D004587 ORTHO05D005512 5.2e-28 128.3 244 38.9
Ah.07g200250 Amaranthus hybridus HOM05D004587 ORTHO05D005512 2.0e-27 126.3 161 52.2
AUR62018727 Chenopodium quinoa HOM05D004587 ORTHO05D005512 2.6e-27 125.9 166 44.0
Medtr5g014320 Medicago truncatula HOM05D004587 ORTHO05D005512 2.6e-27 125.9 161 44.7
Zm00001eb208820 Zea mays HOM05D004587 ORTHO05D005512 3.4e-27 125.6 158 44.3
ECA240G1087 Erigeron canadensis HOM05D004587 ORTHO05D005512 7.6e-27 124.4 165 43.0
CARHR174890 Cardamine hirsuta HOM05D004587 ORTHO05D005512 9.9e-27 124.0 153 45.8
Sabra01G0112000 Salix brachista HOM05D004587 ORTHO05D005512 9.9e-27 124.0 267 33.3
EL10Ac5g12139 Beta vulgaris HOM05D004587 ORTHO05D005512 1.7e-26 123.2 160 45.0
PSO063G5829 Papaver somniferum HOM05D004587 ORTHO05D005512 1.7e-26 123.2 192 38.5
PSO782G4837 Papaver somniferum HOM05D004587 ORTHO05D005512 1.7e-26 123.2 122 50.8
MSTRG.25306 Avicennia marina HOM05D004587 ORTHO05D005512 2.9e-26 122.5 162 42.6
Aa31LG9G6270 Aethionema arabicum HOM05D004587 ORTHO05D005512 4.9e-26 121.7 149 47.7
Carub.0008s0129 Capsella rubella HOM05D004587 ORTHO05D005512 6.4e-26 121.3 152 44.1
Lsat_1_v5_gn_6_64781 Lactuca sativa HOM05D004587 ORTHO05D005512 6.4e-26 121.3 158 44.9
A02p30170 Brassica napus HOM05D004587 ORTHO05D005512 2.4e-25 119.4 153 45.1
ECA233G1850 Erigeron canadensis HOM05D004587 ORTHO05D005512 2.4e-25 119.4 111 55.0
BraA06t27449Z Brassica rapa HOM05D004587 ORTHO05D005512 3.2e-25 119.0 142 45.8
Aqoxy3G02401 Aquilegia oxysepala HOM05D004587 ORTHO05D005512 4.2e-25 118.6 114 57.9
BcaC06g31462 Brassica carinata HOM05D004587 ORTHO05D005512 4.2e-25 118.6 142 45.1
HPP92_001567 Vanilla planifolia HOM05D004587 ORTHO05D005512 4.2e-25 118.6 157 40.8
HPP92_001722 Vanilla planifolia HOM05D004587 ORTHO05D005512 4.2e-25 118.6 157 40.8
AL8G11720 Arabidopsis lyrata HOM05D004587 ORTHO05D005512 5.4e-25 118.2 154 41.6
BraA02t08033Z Brassica rapa HOM05D004587 ORTHO05D005512 9.3e-25 117.5 153 44.4
HanXRQChr02g0043541 Helianthus annuus HOM05D004587 ORTHO05D005512 1.2e-24 117.1 158 41.1
A06p45800 Brassica napus HOM05D004587 ORTHO05D005512 1.6e-24 116.7 145 45.5
unitig_747.g21515 Utricularia gibba HOM05D006546 ORTHO05D008362 2.1e-24 116.3 140 45.7
Sp2g11450 Schrenkiella parvula HOM05D004587 ORTHO05D005512 4.6e-24 115.2 152 43.4
ATR0049G023 Amborella trichopoda HOM05D004587 ORTHO05D005512 7.8e-24 114.4 161 43.5
BolC7t43533H Brassica oleracea HOM05D004587 ORTHO05D005512 1.0e-23 114.0 148 43.9
Thhalv10001062m.g Eutrema salsugineum HOM05D004587 ORTHO05D005512 1.0e-23 114.0 151 43.0
Glyma.01G199100 Glycine max HOM05D004587 ORTHO05D005512 1.3e-23 113.6 155 45.2
C02p47640 Brassica napus HOM05D004587 ORTHO05D005512 1.7e-23 113.2 151 43.0
BolC2t10800H Brassica oleracea HOM05D004587 ORTHO05D005512 1.7e-23 113.2 151 43.0
CDE12G0528 Ceratophyllum demersum HOM05D004587 ORTHO05D005512 2.3e-23 112.8 157 42.7
Phvul.002G006600 Phaseolus vulgaris HOM05D004587 ORTHO05D005512 2.3e-23 112.8 155 46.5
BcaC06g34365 Brassica carinata HOM05D004587 ORTHO05D005512 3.0e-23 112.5 148 43.2
C07p29850 Brassica napus HOM05D004587 ORTHO05D005512 3.0e-23 112.5 148 43.2
Os02g0128100 Oryza sativa ssp. japonica HOM05D004587 ORTHO05D005512 5.1e-23 111.7 170 44.1
Ah.12g054920 Amaranthus hybridus HOM05D004587 ORTHO05D005512 1.5e-22 110.2 162 46.9
AT5G46620 Arabidopsis thaliana HOM05D004587 ORTHO05D005512 2.5e-22 109.4 155 47.1
Lj8A293T23 Lonicera japonica HOM05D004587 ORTHO05D005512 4.3e-22 108.6 219 39.3
BcaC03g16867 Brassica carinata HOM05D004587 ORTHO05D005512 7.3e-22 107.8 105 51.4
HPP92_001583 Vanilla planifolia HOM05D004587 ORTHO05D005512 1.2e-19 100.5 175 34.9
Ciclev10033624m.g Citrus clementina HOM05D004587 ORTHO05D005512 1.5e-19 100.1 81 63.0
VMungo1215G2797 Vigna mungo HOM05D000740 ORTHO05D005071 1.5e-19 100.1 113 48.7
Mapoly0066s0035 Marchantia polymorpha HOM05D004587 ORTHO05D005512 1.3e-18 97.1 159 37.7
Zm00001eb231030 Zea mays HOM05D004587 ORTHO05D005512 1.3e-18 97.1 163 36.8
Nitab4.5_0001276g0030 Nicotiana tabacum HOM05D004587 ORTHO05D005512 1.6e-16 90.1 79 59.5
CAN.G1659.7 Capsicum annuum HOM05D004587 ORTHO05D005512 5.1e-15 85.1 81 53.1
Glyma.11G042700 Glycine max HOM05D004587 ORTHO05D005512 8.7e-15 84.3 155 37.4
Cpa.g.sc90.49 Carica papaya HOM05D004587 ORTHO05D005512 7.3e-14 81.3 88 48.9
Ciclev10033884m.g Citrus clementina HOM05D004587 ORTHO05D005512 1.4e-12 77.0 80 47.5
Haze_08256 Corylus avellana HOM05D004587 ORTHO05D005512 1.8e-12 76.6 73 52.1
Pp3c10_13670 Physcomitrium patens HOM05D004587 ORTHO05D005512 6.9e-12 74.7 109 40.4
AagrBONN_evm.TU.Sc2ySwM_228.3589 Anthoceros agrestis HOM05D004587 ORTHO05D005512 1.2e-11 73.9 111 41.4
Cpa.g.sc90.47 Carica papaya HOM05D004587 ORTHO05D005512 1.5e-11 73.6 72 54.2
Haze_08255 Corylus avellana HOM05D004587 ORTHO05D005512 7.6e-11 71.2 87 51.7
Cfa012421 Carpinus fangiana HOM05D004587 ORTHO05D005512 4.9e-10 68.6 88 47.7
AL7G30750 Arabidopsis lyrata HOM05D004587 ORTHO05D005512 6.4e-10 68.2 80 43.8
SEGI_38344 Sequoiadendron giganteum HOM05D004587 ORTHO05D005512 6.4e-10 68.2 77 42.9
Actinidia03381 Actinidia chinensis HOM05D004587 ORTHO05D005512 1.9e-09 66.6 76 44.7
Nitab4.5_0001276g0020 Nicotiana tabacum HOM05D004587 ORTHO05D005512 4.2e-09 65.5 90 37.8
Pp3c4_4690 Physcomitrium patens HOM05D004587 ORTHO05D005512 2.1e-08 63.2 141 31.2
Sabra19G0094000 Salix brachista HOM05D004587 ORTHO05D005512 1.9e-06 56.6 34 73.5


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