Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN04G0377 Fragaria x ananassa HOM05D007806 ORTHO05D009818 2.4e-217 758.4 362 100.0
FAN18G2497 Fragaria x ananassa HOM05D007806 ORTHO05D009818 4.0e-204 714.5 395 88.6
FAN13G2940 Fragaria x ananassa HOM05D007806 ORTHO05D009818 1.5e-190 669.5 323 98.1
FAN08G1708 Fragaria x ananassa HOM05D007806 ORTHO05D009818 9.0e-188 660.2 323 97.5
RcHm_v2.0_Chr7g0176861 Rosa chinensis HOM05D007806 ORTHO05D009818 1.1e-177 626.7 323 90.7
Prupe.5G246200 Prunus persica HOM05D007806 ORTHO05D009818 3.5e-155 552.0 323 80.5
MD06G1241600 Malus domestica HOM05D007806 ORTHO05D009818 6.1e-152 541.2 323 78.0
Cfa017816 Carpinus fangiana HOM05D007806 ORTHO05D009818 6.3e-141 504.6 316 74.4
QL10p035646 Quercus lobata HOM05D007806 ORTHO05D009818 1.7e-138 496.5 324 71.9
GSVIVG01024230001 Vitis vinifera HOM05D007806 ORTHO05D009818 2.5e-137 492.7 324 71.3
Haze_18394 Corylus avellana HOM05D007806 ORTHO05D009818 3.7e-133 478.8 354 65.5
Thecc.03G069700 Theobroma cacao HOM05D007806 ORTHO05D009818 3.7e-133 478.8 323 68.4
Lj2g0014387 Lotus japonicus HOM05D007806 ORTHO05D009818 1.8e-132 476.5 326 69.6
Gohir.D12G273000 Gossypium hirsutum HOM05D007806 ORTHO05D009818 1.2e-131 473.8 317 70.0
Gorai.008G293400 Gossypium raimondii HOM05D007806 ORTHO05D009818 2.0e-131 473.0 317 69.7
Duzib084G0683 Durio zibethinus HOM05D007806 ORTHO05D009818 2.7e-131 472.6 314 69.1
Nn3g18521 Nelumbo nucifera HOM05D007806 ORTHO05D009818 5.0e-130 468.4 323 68.4
Glyma.16G209900 Glycine max HOM05D007806 ORTHO05D009818 3.3e-129 465.7 329 67.8
Lalb_Chr22g0354101 Lupinus albus HOM05D007806 ORTHO05D009818 4.3e-129 465.3 322 68.6
Manes.01G159900 Manihot esculenta HOM05D007806 ORTHO05D009818 9.5e-129 464.2 318 69.5
DCAR_011398 Daucus carota HOM05D007806 ORTHO05D009818 4.4e-126 455.3 292 69.9
Phvul.004G135900 Phaseolus vulgaris HOM05D007806 ORTHO05D009818 5.7e-126 454.9 328 65.5
Lj5A169T96 Lonicera japonica HOM05D007806 ORTHO05D009818 1.7e-125 453.4 306 69.3
Psat1g118160 Pisum sativum HOM05D007806 ORTHO05D009818 1.7e-125 453.4 292 71.6
Ca_25289_v3 Cicer arietinum L. HOM05D007806 ORTHO05D009818 2.9e-125 452.6 328 66.5
Cpa.g.sc829.2 Carica papaya HOM05D007806 ORTHO05D009818 3.7e-125 452.2 324 65.7
PGR044G0970 Punica granatum HOM05D007806 ORTHO05D009818 4.9e-125 451.8 323 65.9
ClCG01G014670 Citrullus lanatus HOM05D007806 ORTHO05D009818 6.4e-125 451.4 298 68.5
PSO063G6352 Papaver somniferum HOM05D007806 ORTHO05D009818 6.4e-125 451.4 329 66.6
PSO782G4489 Papaver somniferum HOM05D007806 ORTHO05D009818 6.4e-125 451.4 327 65.4
Sed0012569 Sechium edule HOM05D007806 ORTHO05D009818 1.4e-124 450.3 310 68.1
Medtr6g069050 Medicago truncatula HOM05D007806 ORTHO05D009818 1.8e-124 449.9 327 66.4
Peaxi162Scf00171g00027 Petunia axillaris HOM05D007806 ORTHO05D009818 5.9e-123 444.9 307 67.8
VMungo0464G0928 Vigna mungo HOM05D007806 ORTHO05D009818 1.7e-122 443.4 364 59.1
CsaV3_1G007660 Cucumis sativus L. HOM05D007806 ORTHO05D009818 3.0e-122 442.6 299 67.6
Sc18g0002780 Simmondsia chinensis HOM05D007806 ORTHO05D009818 2.5e-121 439.5 323 65.6
Potri.017G154900 Populus trichocarpa HOM05D007806 ORTHO05D009818 5.6e-121 438.3 272 73.2
MBI06_g39055_MAGBIO Magnolia biondii HOM05D007806 ORTHO05D009818 1.8e-119 433.3 297 68.4
Oeu034419.1 Olea europaea HOM05D007806 ORTHO05D009818 1.8e-119 433.3 327 64.5
Gohir.A12G272200 Gossypium hirsutum HOM05D007806 ORTHO05D009818 6.8e-119 431.4 318 67.0
CAN.G861.15 Capsicum annuum HOM05D007806 ORTHO05D009818 1.2e-118 430.6 306 66.0
Nitab4.5_0004170g0010 Nicotiana tabacum HOM05D007806 ORTHO05D009818 2.6e-118 429.5 284 70.1
Sopen03g029810 Solanum pennellii HOM05D007806 ORTHO05D009818 3.4e-118 429.1 306 65.4
Solyc03g019810.3 Solanum lycopersicum HOM05D007806 ORTHO05D009818 7.5e-118 427.9 306 65.4
TAR629G0023 Trochodendron aralioides HOM05D007806 ORTHO05D009818 9.8e-118 427.6 252 77.4
CiPaw.16G075900 Carya illinoinensis HOM05D007806 ORTHO05D009818 1.7e-117 426.8 252 75.4
MELO3C002184.2 Cucumis melo HOM05D007806 ORTHO05D009818 2.9e-117 426.0 377 57.3
PGSC0003DMG400015208 Solanum tuberosum HOM05D007806 ORTHO05D009818 3.7e-117 425.6 306 64.4
Aqoxy3G04345 Aquilegia oxysepala HOM05D007806 ORTHO05D009818 9.2e-116 421.0 270 70.7
EL10Ac8g18997 Beta vulgaris HOM05D007806 ORTHO05D009818 3.0e-114 416.0 323 61.0
arahy.Tifrunner.gnm1.ann1.T8W9V5 Arachis hypogaea HOM05D007806 ORTHO05D009818 1.9e-113 413.3 329 62.3
Nitab4.5_0009307g0070 Nicotiana tabacum HOM05D007806 ORTHO05D009818 2.5e-113 412.9 303 64.0
MSTRG.4314 Avicennia marina HOM05D007806 ORTHO05D009818 2.1e-112 409.8 273 68.5
ATR0124G050 Amborella trichopoda HOM05D007806 ORTHO05D009818 4.7e-112 408.7 317 59.9
Migut.C00455 Erythranthe guttata HOM05D007806 ORTHO05D009818 6.8e-111 404.8 288 64.9
AUR62028303 Chenopodium quinoa HOM05D007806 ORTHO05D009818 7.5e-110 401.4 322 59.9
SalBow2G1738 Salvia bowleyana HOM05D007806 ORTHO05D009818 7.8e-107 391.3 291 60.5
arahy.Tifrunner.gnm1.ann1.L8FXMQ Arachis hypogaea HOM05D007806 ORTHO05D009818 1.8e-103 380.2 313 60.1
Cc00_g01520 Coffea canephora HOM05D007806 ORTHO05D009818 1.5e-102 377.1 224 74.6
Zm00001eb044870 Zea mays HOM05D007806 ORTHO05D009818 3.4e-102 375.9 273 62.3
Zm00001eb221100 Zea mays HOM05D007806 ORTHO05D009818 3.4e-102 375.9 284 60.6
AUR62025297 Chenopodium quinoa HOM05D007806 ORTHO05D009818 1.9e-100 370.2 316 57.6
Dinv11740 Davidia involucrata HOM05D007806 ORTHO05D009818 2.1e-99 366.7 319 58.0
Os10g0492800 Oryza sativa ssp. japonica HOM05D007806 ORTHO05D009818 4.6e-99 365.5 274 61.7
AagrBONN_evm.TU.Sc2ySwM_228.2978 Anthoceros agrestis HOM05D007806 ORTHO05D009818 1.8e-95 353.6 269 60.2
Mapoly0132s0022 Marchantia polymorpha HOM05D007806 ORTHO05D009818 1.8e-95 353.6 275 54.2
Sabra17G0126600 Salix brachista HOM05D007806 ORTHO05D009818 1.3e-93 347.4 334 54.8
Ciclev10021108m.g Citrus clementina HOM05D007806 ORTHO05D009818 7.3e-89 331.6 329 53.5
Pp3c4_4360 Physcomitrium patens HOM05D007806 ORTHO05D009818 9.0e-87 324.7 270 57.0
SMO358G0653 Selaginella moellendorffii HOM05D007806 ORTHO05D009818 4.6e-83 312.4 266 54.1
Ah.14g084760 Amaranthus hybridus HOM05D007806 ORTHO05D009818 1.5e-81 307.4 192 71.9
MCO09G069 Micromonas commoda HOM05D007806 ORTHO05D009818 6.7e-66 255.4 294 45.6
COL.COLO4_22320 Corchorus olitorius HOM05D007806 ORTHO05D009818 1.1e-60 238.0 185 60.0
TPR.G35264 Trifolium pratense HOM05D007806 ORTHO05D009818 1.5e-57 227.6 193 58.0
PRCOL_00005749 Prasinoderma coloniale HOM05D007806 ORTHO05D009818 2.1e-51 207.2 321 37.4
SEGI_35085 Sequoiadendron giganteum HOM05D007806 ORTHO05D009818 2.2e-45 187.2 165 53.3
TWI81G0807 Tripterygium wilfordii HOM05D007806 ORTHO05D009818 6.5e-45 185.7 159 59.1
TPR.G13520 Trifolium pratense HOM05D007806 ORTHO05D009818 1.5e-41 174.5 92 88.0
arahy.Tifrunner.gnm1.ann1.XB21YC Arachis hypogaea HOM05D007806 ORTHO05D009818 6.1e-35 152.5 133 51.9
Hund08555 Selenicereus undatus HOM05D007806 ORTHO05D009818 5.9e-30 136.0 77 77.9
PRCOL_00003744 Prasinoderma coloniale HOM05D007806 ORTHO05D009818 7.2e-28 129.0 246 33.3
Atru.chr9.53 Acer truncatum HOM05D007806 ORTHO05D009818 8.8e-26 122.1 92 59.8
Atru.chr9.50 Acer truncatum HOM05D007806 ORTHO05D009818 5.7e-25 119.4 89 67.4
Cre07.g339450 Chlamydomonas reinhardtii HOM05D007806 ORTHO05D009818 1.6e-22 111.3 301 26.2
Cre06.g271188 Chlamydomonas reinhardtii HOM05D007806 ORTHO05D009818 6.3e-16 89.4 161 34.2
GSVIVG01024233001 Vitis vinifera HOM05D000001 ORTHO05D000003 4.4e-09 66.6 43 74.4
Atru.chr9.51 Acer truncatum HOM05D007806 ORTHO05D009818 1.4e-07 61.6 39 66.7
arahy.Tifrunner.gnm1.ann1.GAXP8C Arachis hypogaea HOM05D007806 ORTHO05D009818 2.0e-06 57.8 40 62.5


User provided reference genes

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