Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN04G0363 Fragaria x ananassa HOM05D000045 ORTHO05D009425 4.5e-129 464.5 227 100.0
FvH4_2g18171 Fragaria vesca HOM05D000045 ORTHO05D009425 9.0e-93 344.0 236 75.8
FvH4_1g25683 Fragaria vesca HOM05D000045 ORTHO05D009425 2.9e-83 312.4 221 73.8
FvH4_2g07931 Fragaria vesca HOM05D000045 ORTHO05D000067 3.3e-79 298.9 214 70.1
Prupe.2G091000 Prunus persica HOM05D000045 ORTHO05D000067 1.9e-58 229.9 202 59.9
Prupe.4G246500 Prunus persica HOM05D000045 ORTHO05D000067 1.9e-58 229.9 202 59.9
Prupe.5G036100 Prunus persica HOM05D000045 ORTHO05D000067 8.2e-54 214.5 231 51.1
FAN11G0750 Fragaria x ananassa HOM05D000045 ORTHO05D009425 3.1e-53 212.6 208 56.7
RhsimUnG0033900 Rhododendron simsii HOM05D000045 ORTHO05D000067 6.9e-53 211.5 210 53.3
FvH4_4g15802 Fragaria vesca HOM05D000045 ORTHO05D000067 5.5e-50 201.8 235 47.2
Rhsim07G0153800 Rhododendron simsii HOM05D000045 ORTHO05D009425 1.2e-49 200.7 200 50.5
Rhsim01G0020000 Rhododendron simsii HOM05D000045 ORTHO05D000067 2.1e-49 199.9 200 51.0
Rhsim03G0133600 Rhododendron simsii HOM05D000045 ORTHO05D009425 3.6e-49 199.1 200 51.0
Rhsim08G0122200 Rhododendron simsii HOM05D000045 ORTHO05D009425 7.9e-49 198.0 234 46.6
Rhsim10G0133400 Rhododendron simsii HOM05D000045 ORTHO05D009425 6.3e-46 188.3 197 49.7
Atru.chr11.1014 Acer truncatum HOM05D000593 ORTHO05D000562 2.4e-45 186.4 228 46.9
Rhsim12G0098500 Rhododendron simsii HOM05D000045 ORTHO05D009425 1.2e-44 184.1 211 46.4
Rhsim10G0083300 Rhododendron simsii HOM05D000045 ORTHO05D009425 7.2e-42 174.9 239 41.4
FAN06G4480 Fragaria x ananassa HOM05D000045 ORTHO05D009425 9.4e-42 174.5 194 49.0
Rhsim02G0072800 Rhododendron simsii HOM05D000045 ORTHO05D009425 2.3e-40 169.9 189 47.6
Aqoxy3G01403 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 3.5e-36 156.0 199 41.7
Rhsim05G0114600 Rhododendron simsii HOM05D000045 ORTHO05D009425 4.5e-36 155.6 176 47.7
Rhsim11G0139600 Rhododendron simsii HOM05D000045 ORTHO05D009425 4.5e-36 155.6 125 56.8
Rhsim13G0113200 Rhododendron simsii HOM05D000045 ORTHO05D009425 4.5e-36 155.6 184 45.7
FAN27G1700 Fragaria x ananassa HOM05D000638 ORTHO05D000801 4.7e-33 145.6 163 50.3
PSO111G0047 Papaver somniferum HOM05D000045 ORTHO05D009425 4.7e-33 145.6 197 40.1
PSO675G8517 Papaver somniferum HOM05D000045 ORTHO05D009425 1.8e-32 143.7 225 35.6
PSO210G0683 Papaver somniferum HOM05D000045 ORTHO05D000067 5.2e-32 142.1 220 38.2
FAN25G2332 Fragaria x ananassa HOM05D000045 ORTHO05D009425 3.4e-31 139.4 174 44.8
FAN01G2304 Fragaria x ananassa HOM05D000045 ORTHO05D009425 6.3e-30 135.2 160 47.5
Prupe.3G154400 Prunus persica HOM05D000045 ORTHO05D009425 3.1e-29 132.9 202 42.6
Rhsim02G0114200 Rhododendron simsii HOM05D000045 ORTHO05D009425 5.4e-29 132.1 187 41.2
Rhsim01G0173000 Rhododendron simsii HOM05D000045 ORTHO05D009425 2.0e-28 130.2 189 41.8
PSO675G7743 Papaver somniferum HOM05D000045 ORTHO05D000067 1.3e-27 127.5 109 51.4
PSO111G0067 Papaver somniferum HOM05D000045 ORTHO05D000067 1.6e-25 120.6 109 46.8
PSO384G4457 Papaver somniferum HOM05D000045 ORTHO05D000067 7.5e-23 111.7 220 30.5
Rhsim11G0039600 Rhododendron simsii HOM05D000045 ORTHO05D009425 7.5e-23 111.7 173 38.7
Rhsim13G0135900 Rhododendron simsii HOM05D000045 ORTHO05D009425 1.3e-22 110.9 156 41.0
Rhsim07G0162500 Rhododendron simsii HOM05D000045 ORTHO05D009425 4.9e-22 109.0 140 45.7
FAN26G0291 Fragaria x ananassa HOM05D000045 ORTHO05D009425 8.3e-22 108.2 137 42.3
PSO541G0262 Papaver somniferum HOM05D000045 ORTHO05D000067 1.4e-21 107.5 230 32.2
PSO782G2244 Papaver somniferum HOM05D000045 ORTHO05D009425 1.4e-21 107.5 225 31.1
PSO541G3683 Papaver somniferum HOM05D000045 ORTHO05D000067 1.6e-20 104.0 198 34.3
PSO478G1715 Papaver somniferum HOM05D000045 ORTHO05D009425 1.3e-19 100.9 198 32.8
PSO782G3504 Papaver somniferum HOM05D000045 ORTHO05D000067 3.8e-19 99.4 113 44.2
PSO063G5241 Papaver somniferum HOM05D000045 ORTHO05D009425 5.0e-19 99.0 142 38.0
PSO063G3848 Papaver somniferum HOM05D000045 ORTHO05D009425 8.6e-19 98.2 156 38.5
Aqoxy2G01617 Aquilegia oxysepala HOM05D000045 ORTHO05D009425 1.5e-18 97.4 127 41.7
FAN17G2605 Fragaria x ananassa HOM05D000045 ORTHO05D009425 1.5e-18 97.4 145 42.8
Rhsim11G0112300 Rhododendron simsii HOM05D000045 ORTHO05D009425 1.9e-18 97.1 161 37.9
PSO170G5863 Papaver somniferum HOM05D000045 ORTHO05D000067 2.5e-18 96.7 78 55.1
TPR.G12781 Trifolium pratense HOM05D000045 ORTHO05D000067 3.3e-18 96.3 202 28.7
PSO478G2933 Papaver somniferum HOM05D000045 ORTHO05D000067 7.2e-18 95.1 78 53.8
PSO675G8607 Papaver somniferum HOM05D000045 ORTHO05D009425 1.2e-17 94.4 188 33.5
Lj1g0015716 Lotus japonicus HOM05D000045 ORTHO05D000067 3.6e-17 92.8 199 28.1
PSO063G1694 Papaver somniferum HOM05D000045 ORTHO05D000067 3.6e-17 92.8 70 55.7
FAN26G0121 Fragaria x ananassa HOM05D000045 ORTHO05D009425 6.1e-17 92.0 111 44.1
Rhsim12G0095100 Rhododendron simsii HOM05D000045 ORTHO05D009425 1.4e-16 90.9 140 40.7
Rhsim01G0149600 Rhododendron simsii HOM05D000045 ORTHO05D009425 2.3e-16 90.1 129 41.1
TPR.G11300 Trifolium pratense HOM05D000045 ORTHO05D000067 5.2e-16 89.0 135 35.6
PSO782G5276 Papaver somniferum HOM05D000045 ORTHO05D009425 8.9e-16 88.2 136 37.5
QL93p1873_0010 Quercus lobata HOM05D000045 ORTHO05D000067 1.2e-15 87.8 198 31.3
PSO063G2355 Papaver somniferum HOM05D000045 ORTHO05D000067 1.5e-15 87.4 78 51.3
PSO153G0002 Papaver somniferum HOM05D000045 ORTHO05D000067 3.4e-15 86.3 198 29.3
Glyma.15G184200 Glycine max HOM05D000045 ORTHO05D000067 5.7e-15 85.5 122 32.8
Aqoxy4G01798 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 7.5e-15 85.1 69 52.2
QL06p038666 Quercus lobata HOM05D000045 ORTHO05D009425 2.9e-14 83.2 196 28.1
PSO421G0698 Papaver somniferum HOM05D000045 ORTHO05D000067 8.3e-14 81.6 198 27.3
PSO017G4008 Papaver somniferum HOM05D000045 ORTHO05D000067 2.4e-13 80.1 228 30.3
PSO170G0991 Papaver somniferum HOM05D000045 ORTHO05D000067 2.4e-13 80.1 228 30.3
Sabra11G0130900 Salix brachista HOM05D000045 ORTHO05D000067 5.4e-13 79.0 224 29.9
Rhsim10G0190800 Rhododendron simsii HOM05D000045 ORTHO05D000067 7.0e-13 78.6 226 30.5
Phvul.002G119401 Phaseolus vulgaris HOM05D000045 ORTHO05D000067 9.2e-13 78.2 228 29.8
Manes.02G117425 Manihot esculenta HOM05D000045 ORTHO05D000067 1.2e-12 77.8 231 29.4
Nn5g31065 Nelumbo nucifera HOM05D000045 ORTHO05D000067 2.0e-12 77.0 228 29.8
Rhsim11G0019000 Rhododendron simsii HOM05D000045 ORTHO05D009425 2.0e-12 77.0 62 51.6
Glyma.11G088700 Glycine max HOM05D000045 ORTHO05D000067 2.7e-12 76.6 228 29.4
Aqoxy1G02677 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 3.5e-12 76.3 229 27.9
Potri.011G145800 Populus trichocarpa HOM05D000045 ORTHO05D000067 3.5e-12 76.3 227 30.0
Rhsim07G0168700 Rhododendron simsii HOM05D000045 ORTHO05D009425 3.5e-12 76.3 130 40.0
CSS0007508 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 4.6e-12 75.9 228 29.8
CSS0016715 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 4.6e-12 75.9 228 29.8
Nn5g31066 Nelumbo nucifera HOM05D000045 ORTHO05D000067 5.9e-12 75.5 228 29.4
Prupe.7G188000 Prunus persica HOM05D000045 ORTHO05D000067 7.8e-12 75.1 229 31.4
Eucgr.F03610 Eucalyptus grandis HOM05D000045 ORTHO05D000067 1.0e-11 74.7 131 32.8
Aqoxy4G01663 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 1.3e-11 74.3 127 29.9
Hma1.2p1_0085F.1_g044300 Hydrangea macrophylla HOM05D000045 ORTHO05D000067 1.3e-11 74.3 226 29.6
Prupe.2G147900 Prunus persica HOM05D000045 ORTHO05D000067 2.3e-11 73.6 136 30.9
Aqoxy6G02606 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 3.0e-11 73.2 127 29.9
PSO063G0978 Papaver somniferum HOM05D000045 ORTHO05D000067 3.0e-11 73.2 52 55.8
Cpa.g.c24967.4 Carica papaya HOM05D000045 ORTHO05D000067 6.6e-11 72.0 224 29.5
FvH4_5g08845 Fragaria vesca HOM05D000045 ORTHO05D017020 6.6e-11 72.0 121 33.1
Aqoxy5G02149 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 1.5e-10 70.9 127 29.1
Dinv23336 Davidia involucrata HOM05D000045 ORTHO05D000067 1.5e-10 70.9 232 28.4
Lalb_Chr09g0324891 Lupinus albus HOM05D000045 ORTHO05D000067 1.5e-10 70.9 206 29.6
QL06p047907 Quercus lobata HOM05D000045 ORTHO05D000067 1.5e-10 70.9 120 31.7
QL06p053456 Quercus lobata HOM05D000045 ORTHO05D000067 1.5e-10 70.9 225 28.9
Lj2g0014388 Lotus japonicus HOM05D000045 ORTHO05D000067 1.9e-10 70.5 204 29.9
PSO017G2536 Papaver somniferum HOM05D000045 ORTHO05D009425 2.5e-10 70.1 135 34.8
Atru.chr3.110 Acer truncatum HOM05D000045 ORTHO05D000067 5.6e-10 68.9 125 32.0
Peaxi162Scf00385g00620 Petunia axillaris HOM05D000045 ORTHO05D000067 5.6e-10 68.9 204 26.0
Atru.chr3.19 Acer truncatum HOM05D000045 ORTHO05D000067 7.3e-10 68.6 121 32.2
PSO170G3889 Papaver somniferum HOM05D000045 ORTHO05D000067 7.3e-10 68.6 77 44.2
QL05p056997 Quercus lobata HOM05D000045 ORTHO05D000067 7.3e-10 68.6 171 30.4
Potri.005G257600 Populus trichocarpa HOM05D000045 ORTHO05D000067 9.5e-10 68.2 204 27.9
RcHm_v2.0_Chr2g0096701 Rosa chinensis HOM05D000045 ORTHO05D000067 9.5e-10 68.2 228 28.5
arahy.Tifrunner.gnm1.ann1.43NZX2 Arachis hypogaea HOM05D000045 ORTHO05D000067 1.2e-09 67.8 204 29.4
Prupe.5G003600 Prunus persica HOM05D000045 ORTHO05D000067 1.2e-09 67.8 227 27.8
CSS0018875 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.6e-09 67.4 228 25.4
FvH4_5g26361 Fragaria vesca HOM05D000045 ORTHO05D000067 1.6e-09 67.4 227 27.8
CAN.G1330.21 Capsicum annuum HOM05D000045 ORTHO05D000067 2.1e-09 67.0 122 32.0
Hma1.2p1_0810F.1_g222000 Hydrangea macrophylla HOM05D000045 ORTHO05D000067 2.1e-09 67.0 133 30.1
MD15G1227300 Malus domestica HOM05D000045 ORTHO05D000067 2.1e-09 67.0 226 29.2
QL93p0049_0121 Quercus lobata HOM05D000045 ORTHO05D000067 2.1e-09 67.0 171 30.4
Rhsim01G0165200 Rhododendron simsii HOM05D000045 ORTHO05D010736 2.1e-09 67.0 138 31.2
FAN25G1546 Fragaria x ananassa HOM05D000439 ORTHO05D001363 2.8e-09 66.6 113 37.2
RcHm_v2.0_Chr7g0217201 Rosa chinensis HOM05D000045 ORTHO05D000067 2.8e-09 66.6 227 27.8
Actinidia02450 Actinidia chinensis HOM05D000045 ORTHO05D000067 3.6e-09 66.2 159 27.7
Ciclev10000383m.g Citrus clementina HOM05D000045 ORTHO05D000067 3.6e-09 66.2 227 28.6
ECA233G5888 Erigeron canadensis HOM05D000045 ORTHO05D000067 3.6e-09 66.2 124 30.6
QL02p015986 Quercus lobata HOM05D000045 ORTHO05D000067 3.6e-09 66.2 204 28.9
Sabra05G0199500 Salix brachista HOM05D000045 ORTHO05D000067 3.6e-09 66.2 204 27.9
FAN06G3126 Fragaria x ananassa HOM05D000045 ORTHO05D009425 4.7e-09 65.9 103 36.9
Nn6g31599 Nelumbo nucifera HOM05D000045 ORTHO05D000067 4.7e-09 65.9 204 28.9
TWI14G0214 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 4.7e-09 65.9 202 27.2
MD06G1002400 Malus domestica HOM05D000045 ORTHO05D000067 6.2e-09 65.5 204 28.4
Dinv05506 Davidia involucrata HOM05D000045 ORTHO05D000067 8.0e-09 65.1 224 28.1
PSO170G0855 Papaver somniferum HOM05D000045 ORTHO05D000067 8.0e-09 65.1 204 28.9
TAR629G1531 Trochodendron aralioides HOM05D000045 ORTHO05D000067 8.0e-09 65.1 203 26.6
CiPaw.07G131900 Carya illinoinensis HOM05D000045 ORTHO05D000067 1.0e-08 64.7 224 28.1
Psat7g063880 Pisum sativum HOM05D000045 ORTHO05D009425 1.0e-08 64.7 174 26.4
Rhsim11G0199100 Rhododendron simsii HOM05D000045 ORTHO05D000067 1.0e-08 64.7 227 24.2
PSO017G1954 Papaver somniferum HOM05D000045 ORTHO05D000067 1.4e-08 64.3 204 28.9
CSS0021305 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.8e-08 63.9 204 27.9
Nitab4.5_0000464g0030 Nicotiana tabacum HOM05D000045 ORTHO05D000067 1.8e-08 63.9 204 26.5
PSO713G0011 Papaver somniferum HOM05D000045 ORTHO05D000067 1.8e-08 63.9 118 33.1
Prupe.7G161500 Prunus persica HOM05D000045 ORTHO05D000067 1.8e-08 63.9 173 28.3
CAN.G660.2 Capsicum annuum HOM05D000045 ORTHO05D000067 2.3e-08 63.5 136 25.0
TAR633G1461 Trochodendron aralioides HOM05D000045 ORTHO05D000067 2.3e-08 63.5 127 29.9
COL.COLO4_03304 Corchorus olitorius HOM05D000045 ORTHO05D000067 3.1e-08 63.2 206 28.2
PSO210G4475 Papaver somniferum HOM05D000045 ORTHO05D000067 3.1e-08 63.2 112 33.9
Thecc.08G098400 Theobroma cacao HOM05D000045 ORTHO05D000067 5.2e-08 62.4 223 27.4
TPR.G23349 Trifolium pratense HOM05D000045 ORTHO05D009425 5.2e-08 62.4 78 38.5
CiPaw.05G024400 Carya illinoinensis HOM05D000045 ORTHO05D000067 8.9e-08 61.6 203 23.2
TWI36G1105 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 8.9e-08 61.6 206 27.7
PSO541G5593 Papaver somniferum HOM05D000045 ORTHO05D000067 1.2e-07 61.2 204 27.5
Aqoxy6G03033 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 1.5e-07 60.8 136 28.7
Ciclev10013881m.g Citrus clementina HOM05D000045 ORTHO05D000067 1.5e-07 60.8 202 28.7
Manes.05G129400 Manihot esculenta HOM05D000045 ORTHO05D000067 1.5e-07 60.8 203 28.1
QL02p051760 Quercus lobata HOM05D000045 ORTHO05D000067 1.5e-07 60.8 176 28.4
TAR376G0491 Trochodendron aralioides HOM05D000045 ORTHO05D000067 1.5e-07 60.8 204 28.9
Glyma.06G247000 Glycine max HOM05D000045 ORTHO05D009425 2.0e-07 60.5 184 23.9
PSO675G7981 Papaver somniferum HOM05D000045 ORTHO05D000067 2.6e-07 60.1 201 27.4
PGR031G1754 Punica granatum HOM05D000045 ORTHO05D000067 3.4e-07 59.7 204 26.0
Solyc04g082845.2 Solanum lycopersicum HOM05D000045 ORTHO05D000067 3.4e-07 59.7 204 26.0
PSO675G3740 Papaver somniferum HOM05D000045 ORTHO05D000067 4.4e-07 59.3 117 32.5
Sopen04g036490 Solanum pennellii HOM05D000045 ORTHO05D000067 4.4e-07 59.3 204 26.0
Duzib116G0469 Durio zibethinus HOM05D000045 ORTHO05D000067 5.8e-07 58.9 223 26.5
CAN.G905.12 Capsicum annuum HOM05D000045 ORTHO05D000067 9.8e-07 58.2 111 27.9
PSO063G0395 Papaver somniferum HOM05D000045 ORTHO05D000067 1.3e-06 57.8 118 31.4
PSO384G1298 Papaver somniferum HOM05D000045 ORTHO05D000067 1.7e-06 57.4 121 29.8
Actinidia14732 Actinidia chinensis HOM05D005374 ORTHO05D006534 2.2e-06 57.0 98 39.8
arahy.Tifrunner.gnm1.ann1.U80MXJ Arachis hypogaea HOM05D000045 ORTHO05D000067 2.9e-06 56.6 121 24.0
MD15G1252700 Malus domestica HOM05D000045 ORTHO05D000067 2.9e-06 56.6 156 25.6
Rhsim11G0165300 Rhododendron simsii HOM05D000045 ORTHO05D000067 2.9e-06 56.6 121 28.1
TWI79G1218 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 2.9e-06 56.6 202 25.7
arahy.Tifrunner.gnm1.ann1.QD7BCG Arachis hypogaea HOM05D008512 ORTHO05D007522 3.7e-06 56.2 109 30.3
Ciclev10018310m.g Citrus clementina HOM05D000045 ORTHO05D000067 3.7e-06 56.2 139 30.2
PSO478G0517 Papaver somniferum HOM05D000045 ORTHO05D000067 3.7e-06 56.2 130 27.7
Ah.10g036100 Amaranthus hybridus HOM05D000045 ORTHO05D000067 4.9e-06 55.8 130 26.9
FAN07G1415 Fragaria x ananassa HOM05D000653 ORTHO05D014143 4.9e-06 55.8 70 45.7
CSS0017444 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 6.4e-06 55.5 121 27.3
FvH4_6g40675 Fragaria vesca HOM05D020255 ORTHO05D020676 6.4e-06 55.5 132 28.0
PSO210G0154 Papaver somniferum HOM05D000045 ORTHO05D009425 6.4e-06 55.5 128 31.2
Rhsim08G0130400 Rhododendron simsii HOM05D000045 ORTHO05D009425 6.4e-06 55.5 112 35.7
PSO210G0657 Papaver somniferum HOM05D000045 ORTHO05D009425 8.3e-06 55.1 128 32.8


User provided reference genes

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